Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN39425


BLASTX 7.6.2

Query= UN39425 /QuerySize=448
        (447 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT2G43460.1 | Symbols:  | 60S ribosomal protein L...    135   1e-032
TAIR9_protein||AT3G59540.1 | Symbols:  | 60S ribosomal protein L...    135   1e-032

>TAIR9_protein||AT2G43460.1 | Symbols:  | 60S ribosomal protein L38 (RPL38A) |
        chr2:18046285-18047292 REVERSE

          Length = 70

 Score =  135 bits (339), Expect = 1e-032
 Identities = 65/70 (92%), Positives = 68/70 (97%)
 Frame = +1

Query:  55 MPKQIHDIKDFLLTARRKDARSVKIKKSKDIVKFKVRCSKYLYTFCVFDQEKADKLKQSL 234
           MPKQIH+IKDFLLTARRKDARSVKIK+SKDIVKFKVRCS+YLYT CVFDQEKADKLKQSL
Sbjct:   1 MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSL 60

Query: 235 PPGLSVQDL* 264
           PPGLSVQDL*
Sbjct:  61 PPGLSVQDL* 70

>TAIR9_protein||AT3G59540.1 | Symbols:  | 60S ribosomal protein L38 (RPL38B) |
        chr3:21995897-21996742 REVERSE

          Length = 70

 Score =  135 bits (339), Expect = 1e-032
 Identities = 65/70 (92%), Positives = 68/70 (97%)
 Frame = +1

Query:  55 MPKQIHDIKDFLLTARRKDARSVKIKKSKDIVKFKVRCSKYLYTFCVFDQEKADKLKQSL 234
           MPKQIH+IKDFLLTARRKDARSVKIK+SKDIVKFKVRCS+YLYT CVFDQEKADKLKQSL
Sbjct:   1 MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQSL 60

Query: 235 PPGLSVQDL* 264
           PPGLSVQDL*
Sbjct:  61 PPGLSVQDL* 70

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,740,495,574
Number of Sequences: 33410
Number of Extensions: 19740495574
Number of Successful Extensions: 636414221
Number of sequences better than 0.0: 0