BLASTX 7.6.2
Query= UN39447 /QuerySize=718
(717 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G48350.1 | Symbols: | ribosomal protein L18 f... 316 1e-086
TAIR9_protein||AT3G17626.1 | Symbols: | FUNCTIONS IN: molecular... 62 3e-010
>TAIR9_protein||AT1G48350.1 | Symbols: | ribosomal protein L18 family protein |
chr1:17867269-17868215 FORWARD
Length = 171
Score = 316 bits (808), Expect = 1e-086
Identities = 162/173 (93%), Positives = 167/173 (96%), Gaps = 2/173 (1%)
Frame = +1
Query: 37 MTSVSGCGSVSLLTNRNAFLGSGLQHRAVFLKPWSPPSLLKSGSMLVVEAKTKTSSEDRI 216
MTSVSGCGSVSL+TNR+AFLG+GLQHRAVFLKPWS S L+S SM VVEAKTKTSSEDRI
Sbjct: 1 MTSVSGCGSVSLITNRSAFLGNGLQHRAVFLKPWSSSS-LQSRSM-VVEAKTKTSSEDRI 58
Query: 217 ARHSRIRKKVNGTTERPRMCVFRSNKHLYVQVIDDTKMHTLASASTKQKPISEEFDYTSG 396
ARHSRIRKKVNGTTERPR+CVFRSNKHLYVQVIDDTKMHTLASASTKQKPISEEFDYTSG
Sbjct: 59 ARHSRIRKKVNGTTERPRLCVFRSNKHLYVQVIDDTKMHTLASASTKQKPISEEFDYTSG 118
Query: 397 PTIEVAKKVGEVIAKSCLEKGITKVAFDRGGYPYHGRIEALAAAAREHGLQF* 555
PTIEVAKKVGEVIAKSCLEKGITKVAFDRGGYPYHGRIEALAAAAREHGLQF*
Sbjct: 119 PTIEVAKKVGEVIAKSCLEKGITKVAFDRGGYPYHGRIEALAAAAREHGLQF* 171
>TAIR9_protein||AT3G17626.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein match is:
ribosomal protein L18 family protein (TAIR:AT1G48350.1); Has 336 Blast
hits to 336 proteins in 121 species: Archae - 0; Bacteria - 241;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 58
(source: NCBI BLink). | chr3:6028179-6028494 FORWARD
Length = 54
Score = 62 bits (149), Expect = 3e-010
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = +1
Query: 391 SGPTIEVAKKVGEVIAKSCLEKGITKVAFDRGGYPYHG 504
+G TIE+AKKVGEVI KSC+E GITKVAFDR Y YHG
Sbjct: 10 TGSTIEMAKKVGEVIEKSCVENGITKVAFDRAIYTYHG 47
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,740,495,574
Number of Sequences: 33410
Number of Extensions: 19740495574
Number of Successful Extensions: 636414221
Number of sequences better than 0.0: 0
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