BLASTX 7.6.2
Query= UN39758 /QuerySize=933
(932 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G01790.1 | Symbols: | ribosomal protein L13 f... 379 2e-105
TAIR9_protein||AT3G01790.2 | Symbols: | ribosomal protein L13 f... 379 2e-105
TAIR9_protein||AT1G78630.1 | Symbols: emb1473 | emb1473 (embryo ... 80 1e-015
>TAIR9_protein||AT3G01790.1 | Symbols: | ribosomal protein L13 family protein |
chr3:283880-285583 REVERSE
Length = 206
Score = 379 bits (972), Expect = 2e-105
Identities = 185/197 (93%), Positives = 188/197 (95%)
Frame = +2
Query: 71 TMATQAASFTGNLKKAVAGIKRINLDGLRWRVFDAKGQVLGRLASQISTVLQAKDKPTYC 250
T A AASF GNLKKAVAGIKRINLDGLRWRVFDA+GQVLGRLASQISTVLQAKDKPTYC
Sbjct: 3 TQAAAAASFKGNLKKAVAGIKRINLDGLRWRVFDARGQVLGRLASQISTVLQAKDKPTYC 62
Query: 251 PNRDDGDICIVLNAKDIGITGRKLTDKFYRWHTGYVGHLKERSLKDQMAKDPTEVIRKAV 430
PNRDDGDICIVLNAK+IG TGRKLTDKFYRWHTGY+GHLKERSLKDQMAKDPTEVIRKAV
Sbjct: 63 PNRDDGDICIVLNAKEIGFTGRKLTDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKAV 122
Query: 431 WRMLPSNNLRDDRDRKLRIFEGNEHPFGDKPLEPFVMPPRTVREMRPRARRAMIRAQKKA 610
WRMLPSNNLRDDRDRKLRIFEG EHPFGDKPLEPFVMPPR VREMRPRARRAMIRAQKKA
Sbjct: 123 WRMLPSNNLRDDRDRKLRIFEGGEHPFGDKPLEPFVMPPRRVREMRPRARRAMIRAQKKA 182
Query: 611 EQAENGGGEVKKGKKRT 661
EQAEN G EVKKGKKRT
Sbjct: 183 EQAENEGTEVKKGKKRT 199
>TAIR9_protein||AT3G01790.2 | Symbols: | ribosomal protein L13 family protein |
chr3:283880-285583 REVERSE
Length = 206
Score = 379 bits (972), Expect = 2e-105
Identities = 185/197 (93%), Positives = 188/197 (95%)
Frame = +2
Query: 71 TMATQAASFTGNLKKAVAGIKRINLDGLRWRVFDAKGQVLGRLASQISTVLQAKDKPTYC 250
T A AASF GNLKKAVAGIKRINLDGLRWRVFDA+GQVLGRLASQISTVLQAKDKPTYC
Sbjct: 3 TQAAAAASFKGNLKKAVAGIKRINLDGLRWRVFDARGQVLGRLASQISTVLQAKDKPTYC 62
Query: 251 PNRDDGDICIVLNAKDIGITGRKLTDKFYRWHTGYVGHLKERSLKDQMAKDPTEVIRKAV 430
PNRDDGDICIVLNAK+IG TGRKLTDKFYRWHTGY+GHLKERSLKDQMAKDPTEVIRKAV
Sbjct: 63 PNRDDGDICIVLNAKEIGFTGRKLTDKFYRWHTGYIGHLKERSLKDQMAKDPTEVIRKAV 122
Query: 431 WRMLPSNNLRDDRDRKLRIFEGNEHPFGDKPLEPFVMPPRTVREMRPRARRAMIRAQKKA 610
WRMLPSNNLRDDRDRKLRIFEG EHPFGDKPLEPFVMPPR VREMRPRARRAMIRAQKKA
Sbjct: 123 WRMLPSNNLRDDRDRKLRIFEGGEHPFGDKPLEPFVMPPRRVREMRPRARRAMIRAQKKA 182
Query: 611 EQAENGGGEVKKGKKRT 661
EQAEN G EVKKGKKRT
Sbjct: 183 EQAENEGTEVKKGKKRT 199
>TAIR9_protein||AT1G78630.1 | Symbols: emb1473 | emb1473 (embryo defective
1473); structural constituent of ribosome | chr1:29575997-29577406
FORWARD
Length = 242
Score = 80 bits (197), Expect = 1e-015
Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 1/125 (0%)
Frame = +2
Query: 158 WRVFDAKGQVLGRLASQISTVLQAKDKPTYCPNRDDGDICIVLNAKDIGITGRKLTDKFY 337
W V DA ++LGRLAS I+ ++ K+ +Y P+ D G IV+NA+ + ++G+K K Y
Sbjct: 105 WFVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLY 164
Query: 338 RWHTGYVGHLKERSLKDQMAKDPTEVIRKAVWRMLPSNNLRDDRDRKLRIFEGNEHPF-G 514
R H+G G + + + P ++ AV MLP L L++++G +HP
Sbjct: 165 RRHSGRPGGMTVETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEA 224
Query: 515 DKPLE 529
KPL+
Sbjct: 225 QKPLD 229
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,883,443,301
Number of Sequences: 33410
Number of Extensions: 19883443301
Number of Successful Extensions: 642027823
Number of sequences better than 0.0: 0
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