BLASTX 7.6.2
Query= UN39793 /QuerySize=597
(596 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|119720780|gb|ABL97960.1| photosystem II 10kDa polytpeptide [B... 274 8e-072
gi|28207611|gb|AAO32060.1| photosystem II 10kDa polypeptide [Bra... 270 1e-070
gi|1346871|sp|P49108.1|PSBR_BRACM RecName: Full=Photosystem II 1... 270 1e-070
gi|121483553|gb|ABM54168.1| PSII 10Kd peptide [Brassica juncea] 265 5e-069
gi|15219268|ref|NP_178025.1| photosystem II subunit R [Arabidops... 263 1e-068
gi|297839767|ref|XP_002887765.1| hypothetical protein ARALYDRAFT... 251 7e-065
gi|193872616|gb|ACF23036.1| ST244 [Eutrema halophilum] 250 9e-065
gi|131399|sp|P06183.1|PSBR_SOLTU RecName: Full=Photosystem II 10... 223 2e-056
gi|21491|emb|CAA27989.1| unnamed protein product [Solanum tubero... 222 3e-056
gi|3914471|sp|Q40163.1|PSBR_SOLLC RecName: Full=Photosystem II 1... 222 3e-056
gi|158343304|gb|ABW35320.1| chloroplast photosystem II PsbR [Pro... 220 1e-055
gi|255626243|gb|ACU13466.1| unknown [Glycine max] 218 7e-055
gi|3914472|sp|Q40519.1|PSBR_TOBAC RecName: Full=Photosystem II 1... 215 3e-054
gi|83776786|gb|ABC46708.1| chloroplast photosystem II 10 kDa pro... 215 4e-054
gi|225462227|ref|XP_002271791.1| PREDICTED: hypothetical protein... 213 2e-053
gi|1418984|emb|CAA99757.1| photosystem II 10 kD polypeptide [Sol... 212 3e-053
gi|118488826|gb|ABK96223.1| unknown [Populus trichocarpa x Popul... 207 9e-052
gi|224115282|ref|XP_002332206.1| hypothetical protein POPTRDRAFT... 205 4e-051
gi|255578166|ref|XP_002529952.1| Photosystem II 10 kDa polypepti... 202 3e-050
gi|131400|sp|P10690.1|PSBR_SPIOL RecName: Full=Photosystem II 10... 202 4e-050
>gi|119720780|gb|ABL97960.1| photosystem II 10kDa polytpeptide [Brassica rapa]
Length = 140
Score = 274 bits (699), Expect = 8e-072
Identities = 137/140 (97%), Positives = 138/140 (98%)
Frame = +3
Query: 45 MAASVMLSSVTLKPAGFTVEKMSARGLPSLARAPSSFKIVASGVKKIKTDKPFGVNGSMD 224
MAAS+MLSSVTLKPAGFTVEKMS RGLPSL RAPSSFKIVASGVKKIKTDKPFGVNGSMD
Sbjct: 1 MAASLMLSSVTLKPAGFTVEKMSVRGLPSLTRAPSSFKIVASGVKKIKTDKPFGVNGSMD 60
Query: 225 LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVT 404
LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVT
Sbjct: 61 LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVT 120
Query: 405 LAGILAGGALLVYNTSALAQ 464
LAGILAGGALLVYNTSALAQ
Sbjct: 121 LAGILAGGALLVYNTSALAQ 140
>gi|28207611|gb|AAO32060.1| photosystem II 10kDa polypeptide [Brassica rapa
subsp. pekinensis]
Length = 137
Score = 270 bits (689), Expect = 1e-070
Identities = 135/137 (98%)
Frame = +3
Query: 54 SVMLSSVTLKPAGFTVEKMSARGLPSLARAPSSFKIVASGVKKIKTDKPFGVNGSMDLRD 233
SVMLSSVTLKPAGFTVEKMS RGLPSL RAPSSFKIVASGVKKIKTDKPFGVNGSMDLRD
Sbjct: 1 SVMLSSVTLKPAGFTVEKMSVRGLPSLTRAPSSFKIVASGVKKIKTDKPFGVNGSMDLRD 60
Query: 234 GLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLAG 413
GLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLAG
Sbjct: 61 GLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLAG 120
Query: 414 ILAGGALLVYNTSALAQ 464
ILAGGALLVYNTSALAQ
Sbjct: 121 ILAGGALLVYNTSALAQ 137
>gi|1346871|sp|P49108.1|PSBR_BRACM RecName: Full=Photosystem II 10 kDa
polypeptide, chloroplastic; Flags: Precursor
Length = 141
Score = 270 bits (688), Expect = 1e-070
Identities = 137/141 (97%), Positives = 139/141 (98%), Gaps = 1/141 (0%)
Frame = +3
Query: 45 MAASVMLSSVTLKPAGFTVEKMSARGLPSLARA-PSSFKIVASGVKKIKTDKPFGVNGSM 221
MAASVMLSSVTLKPAGFTVEKMSARGLPSL RA PSSF+IVASGVKKIKTDKPFGVNGSM
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 222 DLRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 401
DLRDG+DASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 120
Query: 402 TLAGILAGGALLVYNTSALAQ 464
TLAGILAGGALLVYNTSALAQ
Sbjct: 121 TLAGILAGGALLVYNTSALAQ 141
>gi|121483553|gb|ABM54168.1| PSII 10Kd peptide [Brassica juncea]
Length = 141
Score = 265 bits (675), Expect = 5e-069
Identities = 134/141 (95%), Positives = 138/141 (97%), Gaps = 1/141 (0%)
Frame = +3
Query: 45 MAASVMLSSVTLKPAGFTVEKMSARGLPSLARA-PSSFKIVASGVKKIKTDKPFGVNGSM 221
MAASVMLS VTLKPAGFTVEKMSARGLPSL RA PSSF+IVASGVKKIKTDKPFGVNGSM
Sbjct: 1 MAASVMLSPVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 222 DLRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 401
DLRDG+DASGRKGKGYGVYKFVD+YGANVDGYSPIYNE+EWSASGDVYKGGVTGLAIWAV
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDEYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAV 120
Query: 402 TLAGILAGGALLVYNTSALAQ 464
TLAGILAGGALLVYNTSALAQ
Sbjct: 121 TLAGILAGGALLVYNTSALAQ 141
>gi|15219268|ref|NP_178025.1| photosystem II subunit R [Arabidopsis thaliana]
Length = 140
Score = 263 bits (671), Expect = 1e-068
Identities = 131/140 (93%), Positives = 136/140 (97%)
Frame = +3
Query: 45 MAASVMLSSVTLKPAGFTVEKMSARGLPSLARAPSSFKIVASGVKKIKTDKPFGVNGSMD 224
MAASVMLSSVTLKPAGFTVEK +ARGLPSL RA SFKIVASGVKKIKTDKPFG+NGSMD
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKTAARGLPSLTRARPSFKIVASGVKKIKTDKPFGINGSMD 60
Query: 225 LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVT 404
LRDG+DASGRKGKGYGVYK+VDKYGANVDGYSPIYNE+EWSASGDVYKGGVTGLAIWAVT
Sbjct: 61 LRDGVDASGRKGKGYGVYKYVDKYGANVDGYSPIYNENEWSASGDVYKGGVTGLAIWAVT 120
Query: 405 LAGILAGGALLVYNTSALAQ 464
LAGILAGGALLVYNTSALAQ
Sbjct: 121 LAGILAGGALLVYNTSALAQ 140
>gi|297839767|ref|XP_002887765.1| hypothetical protein ARALYDRAFT_477073
[Arabidopsis lyrata subsp. lyrata]
Length = 133
Score = 251 bits (639), Expect = 7e-065
Identities = 124/133 (93%), Positives = 129/133 (96%)
Frame = +3
Query: 45 MAASVMLSSVTLKPAGFTVEKMSARGLPSLARAPSSFKIVASGVKKIKTDKPFGVNGSMD 224
MAASVMLSSVTLKPAGFTVEK +ARGLPSL RA SFKIVASGVKKIKTDKPFG+NGSMD
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKAAARGLPSLTRARPSFKIVASGVKKIKTDKPFGINGSMD 60
Query: 225 LRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVT 404
LRDG+DASGRKGKGYGVYK+VDKYGANVDGYSPIYNE+EWSASGDVYKGGVTGLAIWAVT
Sbjct: 61 LRDGVDASGRKGKGYGVYKYVDKYGANVDGYSPIYNENEWSASGDVYKGGVTGLAIWAVT 120
Query: 405 LAGILAGGALLVY 443
LAGILAGGALLVY
Sbjct: 121 LAGILAGGALLVY 133
>gi|193872616|gb|ACF23036.1| ST244 [Eutrema halophilum]
Length = 146
Score = 250 bits (638), Expect = 9e-065
Identities = 124/141 (87%), Positives = 130/141 (92%), Gaps = 1/141 (0%)
Frame = +3
Query: 45 MAASVMLSSVTLKPAGFTVEKMSARGLPSLARA-PSSFKIVASGVKKIKTDKPFGVNGSM 221
MAASVMLSSVTLKPAGFTVEKMSARGLPSL RA PSSF+IVASGVKKIKTDKPFGVNGSM
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 222 DLRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 401
DLRDG+DASGRKGKGYGVYKFVDKYGANVDGYSPIYNE+EW+ GD YKGGVTGL WA
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEEEWAPGGDTYKGGVTGLVFWAA 120
Query: 402 TLAGILAGGALLVYNTSALAQ 464
TLAG+L GG L+VYNT ALAQ
Sbjct: 121 TLAGLLGGGPLVVYNTGALAQ 141
>gi|131399|sp|P06183.1|PSBR_SOLTU RecName: Full=Photosystem II 10 kDa
polypeptide, chloroplastic; AltName: Full=Light-inducible
tissue-specific ST-LS1 protein; Flags: Precursor
Length = 138
Score = 223 bits (567), Expect = 2e-056
Identities = 110/138 (79%), Positives = 124/138 (89%), Gaps = 1/138 (0%)
Frame = +3
Query: 51 ASVMLSSVTLKPAGFTVEKMSARGLPSLARAPSSFKIVASGVKKIKTDKPFGVNGSMDLR 230
AS ++SS++LKP FT+EK S +GLPSLAR+ SSFK+VASGVKK+KTDKP+G+NGSM LR
Sbjct: 2 ASTVMSSLSLKPT-FTLEKTSVKGLPSLARSSSSFKVVASGVKKLKTDKPYGINGSMALR 60
Query: 231 DGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLA 410
DG+DASGRK KG GVY++VDKYGANVDGYSPIYN DEWS SGDVY GG TGLAIWAVTL
Sbjct: 61 DGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLV 120
Query: 411 GILAGGALLVYNTSALAQ 464
GILAGGALLVYNTSALAQ
Sbjct: 121 GILAGGALLVYNTSALAQ 138
>gi|21491|emb|CAA27989.1| unnamed protein product [Solanum tuberosum]
Length = 138
Score = 222 bits (565), Expect = 3e-056
Identities = 110/138 (79%), Positives = 123/138 (89%), Gaps = 1/138 (0%)
Frame = +3
Query: 51 ASVMLSSVTLKPAGFTVEKMSARGLPSLARAPSSFKIVASGVKKIKTDKPFGVNGSMDLR 230
AS ++SS++LKP FT+EK S +GLPSLAR+ S FK+VASGVKK+KTDKP+G+NGSM LR
Sbjct: 2 ASTVMSSLSLKPT-FTLEKTSVKGLPSLARSSSPFKVVASGVKKLKTDKPYGINGSMALR 60
Query: 231 DGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLA 410
DGLDASGRK KG GVY++VDKYGANVDGYSPIYN DEWS SGDVY GG TGLAIWAVTL
Sbjct: 61 DGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLV 120
Query: 411 GILAGGALLVYNTSALAQ 464
GILAGGALLVYNTSALAQ
Sbjct: 121 GILAGGALLVYNTSALAQ 138
>gi|3914471|sp|Q40163.1|PSBR_SOLLC RecName: Full=Photosystem II 10 kDa
polypeptide, chloroplastic; Flags: Precursor
Length = 138
Score = 222 bits (564), Expect = 3e-056
Identities = 109/138 (78%), Positives = 124/138 (89%), Gaps = 1/138 (0%)
Frame = +3
Query: 51 ASVMLSSVTLKPAGFTVEKMSARGLPSLARAPSSFKIVASGVKKIKTDKPFGVNGSMDLR 230
AS ++SS++LKP FT+EK+S +GLPSL R+ SSFK+VASGVKK+KTDKP+G+NGSM LR
Sbjct: 2 ASTVMSSLSLKPT-FTLEKISVKGLPSLTRSSSSFKVVASGVKKLKTDKPYGINGSMALR 60
Query: 231 DGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLA 410
DG+DASGRK KG GVY++VDKYGANVDGYSPIYN DEWS SGDVY GG TGLAIWAVTL
Sbjct: 61 DGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLL 120
Query: 411 GILAGGALLVYNTSALAQ 464
GILAGGALLVYNTSALAQ
Sbjct: 121 GILAGGALLVYNTSALAQ 138
>gi|158343304|gb|ABW35320.1| chloroplast photosystem II PsbR [Prosopis
juliflora]
Length = 139
Score = 220 bits (560), Expect = 1e-055
Identities = 106/138 (76%), Positives = 124/138 (89%)
Frame = +3
Query: 51 ASVMLSSVTLKPAGFTVEKMSARGLPSLARAPSSFKIVASGVKKIKTDKPFGVNGSMDLR 230
AS +++SV+LKPA FTVEK + RGLPSL+R+ SSFK+VASG KKIKTDKP+G+NG M+L
Sbjct: 2 ASSVMASVSLKPAPFTVEKSAVRGLPSLSRSSSSFKVVASGGKKIKTDKPYGINGGMNLV 61
Query: 231 DGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLA 410
+G+D+SGRKGKG GVY+FVDKYG NVDGYSPIYN ++WS SGDVY GG TGLAIWAVTLA
Sbjct: 62 EGVDSSGRKGKGKGVYQFVDKYGTNVDGYSPIYNTEDWSPSGDVYVGGTTGLAIWAVTLA 121
Query: 411 GILAGGALLVYNTSALAQ 464
G+LAGGALLVYNTSALAQ
Sbjct: 122 GLLAGGALLVYNTSALAQ 139
>gi|255626243|gb|ACU13466.1| unknown [Glycine max]
Length = 139
Score = 218 bits (553), Expect = 7e-055
Identities = 106/138 (76%), Positives = 121/138 (87%)
Frame = +3
Query: 51 ASVMLSSVTLKPAGFTVEKMSARGLPSLARAPSSFKIVASGVKKIKTDKPFGVNGSMDLR 230
AS +++SV LKPA FTVEK S RGLPSL+R SSF++VASG KKIKTDKP+G+NG M LR
Sbjct: 2 ASSVMASVALKPAPFTVEKSSVRGLPSLSRNSSSFRVVASGGKKIKTDKPYGINGGMALR 61
Query: 231 DGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLA 410
+G+DASGRKGKG GVY+FVDKYGANVDGYSPIY+ +WS +GDVY GG TGLAIWAVTL
Sbjct: 62 EGVDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYAGGTTGLAIWAVTLL 121
Query: 411 GILAGGALLVYNTSALAQ 464
G+LAGGALLVYNTSALAQ
Sbjct: 122 GLLAGGALLVYNTSALAQ 139
>gi|3914472|sp|Q40519.1|PSBR_TOBAC RecName: Full=Photosystem II 10 kDa
polypeptide, chloroplastic; Short=PII10; Flags: Precursor
Length = 136
Score = 215 bits (547), Expect = 3e-054
Identities = 103/131 (78%), Positives = 118/131 (90%)
Frame = +3
Query: 72 VTLKPAGFTVEKMSARGLPSLARAPSSFKIVASGVKKIKTDKPFGVNGSMDLRDGLDASG 251
++LKPA F+VEK + +GLPSLAR+ SSF++ ASGVKK+KTDKP+G+NGSM LRDG+DASG
Sbjct: 6 MSLKPAPFSVEKTAVKGLPSLARSSSSFRVQASGVKKLKTDKPYGINGSMSLRDGVDASG 65
Query: 252 RKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLAGILAGGA 431
RK KG GVY+FVDKYGANVDGYSPIYN D+WS SGDVY GG TGLAIWAVTL GILAGGA
Sbjct: 66 RKQKGKGVYQFVDKYGANVDGYSPIYNTDDWSPSGDVYVGGTTGLAIWAVTLVGILAGGA 125
Query: 432 LLVYNTSALAQ 464
LLV+NTSALAQ
Sbjct: 126 LLVFNTSALAQ 136
>gi|83776786|gb|ABC46708.1| chloroplast photosystem II 10 kDa protein [Arachis
hypogaea]
Length = 129
Score = 215 bits (546), Expect = 4e-054
Identities = 102/129 (79%), Positives = 116/129 (89%)
Frame = +3
Query: 78 LKPAGFTVEKMSARGLPSLARAPSSFKIVASGVKKIKTDKPFGVNGSMDLRDGLDASGRK 257
LKPA FT E+ S RG+PSL+RA SSFK+VASG KKIKTDKP+G+NG M+LRDGLDASGRK
Sbjct: 1 LKPAPFTAERSSVRGIPSLSRASSSFKVVASGGKKIKTDKPYGINGGMNLRDGLDASGRK 60
Query: 258 GKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLAGILAGGALL 437
GKG GVY+FVDKYGANVDGYSPIY++ +WS +GDVY GG TGLAIWAVTL G+LAGGALL
Sbjct: 61 GKGKGVYQFVDKYGANVDGYSPIYDQKDWSPTGDVYTGGTTGLAIWAVTLVGLLAGGALL 120
Query: 438 VYNTSALAQ 464
VYNTSAL+Q
Sbjct: 121 VYNTSALSQ 129
>gi|225462227|ref|XP_002271791.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 139
Score = 213 bits (540), Expect = 2e-053
Identities = 106/139 (76%), Positives = 120/139 (86%), Gaps = 1/139 (0%)
Frame = +3
Query: 48 AASVMLSSVTLKPAGFTVEKMSARGLPSLARAPSSFKIVASGVKKIKTDKPFGVNGSMDL 227
AASVM SS++LKP+ F+VE+ + RGLPSLAR+ SSF++ ASG KKIKTDKP+G+ G M L
Sbjct: 2 AASVM-SSLSLKPSPFSVERRAVRGLPSLARSSSSFRVEASGGKKIKTDKPYGIGGGMKL 60
Query: 228 RDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTL 407
DGLDASGRKGKG GVY+FVDKYGANVDGYSPIY+ DEWS GDVY GG TGL IWAVTL
Sbjct: 61 SDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPGGDVYVGGTTGLLIWAVTL 120
Query: 408 AGILAGGALLVYNTSALAQ 464
AG+L GGALLVYNTSALAQ
Sbjct: 121 AGLLLGGALLVYNTSALAQ 139
>gi|1418984|emb|CAA99757.1| photosystem II 10 kD polypeptide [Solanum
lycopersicum]
Length = 130
Score = 212 bits (539), Expect = 3e-053
Identities = 104/130 (80%), Positives = 116/130 (89%), Gaps = 1/130 (0%)
Frame = +3
Query: 75 TLKPAGFTVEKMSARGLPSLARAPSSFKIVASGVKKIKTDKPFGVNGSMDLRDGLDASGR 254
+LKP FT+EK+S +GLPSL R+ SSFK+VA GVKK+KTDKP+G+NGSM LRDG+DASGR
Sbjct: 2 SLKPT-FTLEKISVKGLPSLTRSSSSFKVVARGVKKLKTDKPYGINGSMALRDGVDASGR 60
Query: 255 KGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLAGILAGGAL 434
K KG GVY++VDKYGANVDGYSPIYN DEWS SGDVY GG TGLAIWAVTL GILAGGAL
Sbjct: 61 KPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWAVTLLGILAGGAL 120
Query: 435 LVYNTSALAQ 464
LVYNTSALAQ
Sbjct: 121 LVYNTSALAQ 130
>gi|118488826|gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 137
Score = 207 bits (526), Expect = 9e-052
Identities = 104/135 (77%), Positives = 117/135 (86%), Gaps = 2/135 (1%)
Frame = +3
Query: 60 MLSSVTLKPAGFTVEKMSARGLPSLARAPSSFKIVASGVKKIKTDKPFGVNGSMDLRDGL 239
+++S++LKP+ FTVEK S RGLP+L+R SFKI ASGVKKIKTD P+G G M+LRDGL
Sbjct: 5 VMASLSLKPSPFTVEKSSVRGLPTLSR--RSFKIEASGVKKIKTDTPYGTGGGMNLRDGL 62
Query: 240 DASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLAGIL 419
DASGRK KG GVY++VDKYGANVDGYSPIYN DEWS SGDVY GG TGL IWAVTLAGIL
Sbjct: 63 DASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYAGGKTGLLIWAVTLAGIL 122
Query: 420 AGGALLVYNTSALAQ 464
AGGALLVY+TSALAQ
Sbjct: 123 AGGALLVYSTSALAQ 137
>gi|224115282|ref|XP_002332206.1| hypothetical protein POPTRDRAFT_674736
[Populus trichocarpa]
Length = 137
Score = 205 bits (520), Expect = 4e-051
Identities = 102/135 (75%), Positives = 117/135 (86%), Gaps = 2/135 (1%)
Frame = +3
Query: 60 MLSSVTLKPAGFTVEKMSARGLPSLARAPSSFKIVASGVKKIKTDKPFGVNGSMDLRDGL 239
+++S++LKP+ FTVEK S RGLP+L+R +FKI ASGVKKIKTD P+G G M+LRDGL
Sbjct: 5 VMASLSLKPSPFTVEKSSVRGLPTLSR--RTFKIEASGVKKIKTDTPYGTGGGMNLRDGL 62
Query: 240 DASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLAGIL 419
DASGRK KG GVY++VDKYGANVDGYSPIYN DEWS +GDVY GG TGL IWAVTLAGIL
Sbjct: 63 DASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYAGGKTGLLIWAVTLAGIL 122
Query: 420 AGGALLVYNTSALAQ 464
AGGALLVY+TSALAQ
Sbjct: 123 AGGALLVYSTSALAQ 137
>gi|255578166|ref|XP_002529952.1| Photosystem II 10 kDa polypeptide, chloroplast
precursor, putative [Ricinus communis]
Length = 138
Score = 202 bits (513), Expect = 3e-050
Identities = 101/139 (72%), Positives = 121/139 (87%), Gaps = 3/139 (2%)
Frame = +3
Query: 51 ASVMLSSVTLKPAGFTVEKMSA-RGLPSLARAPSSFKIVASGVKKIKTDKPFGVNGSMDL 227
AS +++SV+LKP+ FTV+K S+ RGLP+L+R +F+I ASG KKIKTDKP+G+ G M+L
Sbjct: 2 ASSVMASVSLKPSPFTVQKSSSVRGLPTLSR--RTFRIEASGGKKIKTDKPYGIGGGMEL 59
Query: 228 RDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTL 407
R+G+DASGRK G GVY+FVDKYGANVDGYSPIYN DEWS +GDVY GG TGLAIWA+TL
Sbjct: 60 RNGVDASGRKPTGKGVYQFVDKYGANVDGYSPIYNTDEWSPTGDVYAGGATGLAIWAITL 119
Query: 408 AGILAGGALLVYNTSALAQ 464
AG+LAGGALLVYNTSALAQ
Sbjct: 120 AGLLAGGALLVYNTSALAQ 138
>gi|131400|sp|P10690.1|PSBR_SPIOL RecName: Full=Photosystem II 10 kDa
polypeptide, chloroplastic; Flags: Precursor
Length = 140
Score = 202 bits (512), Expect = 4e-050
Identities = 102/141 (72%), Positives = 119/141 (84%), Gaps = 2/141 (1%)
Frame = +3
Query: 45 MAASVMLSSVTLKPAGFTVEKMSA-RGLPSLARAPSSFKIVASGVKKIKTDKPFGVNGSM 221
MA SVM SS++LKP+ F V+ SA +GLPSL+R+ +SF + ASGVKKIK DKP G+ G M
Sbjct: 1 MATSVM-SSLSLKPSSFGVDTKSAVKGLPSLSRSSASFTVRASGVKKIKVDKPLGIGGGM 59
Query: 222 DLRDGLDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 401
LRDG+D+SGRK G GVY+FVDKYGANVDGYSPIYNE+EW+ +GDVY GG TGL IWAV
Sbjct: 60 KLRDGVDSSGRKPTGKGVYQFVDKYGANVDGYSPIYNEEEWAPTGDVYAGGTTGLLIWAV 119
Query: 402 TLAGILAGGALLVYNTSALAQ 464
TLAG+LAGGALLVYNTSALAQ
Sbjct: 120 TLAGLLAGGALLVYNTSALAQ 140
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,398,412,446,239
Number of Sequences: 15229318
Number of Extensions: 4398412446239
Number of Successful Extensions: 1041631018
Number of sequences better than 0.0: 0
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