BLASTX 7.6.2
Query= UN39832 /QuerySize=550
(549 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|90186625|gb|ABD91572.1| unknown [Brassica rapa] 190 1e-046
gi|18402859|ref|NP_566674.1| photosystem II subunit T [Arabidops... 181 5e-044
gi|297789402|ref|XP_002862672.1| hypothetical protein ARALYDRAFT... 180 9e-044
gi|1465366|emb|CAA66701.1| photosystem II [Arabidopsis thaliana] 176 2e-042
gi|312283313|dbj|BAJ34522.1| unnamed protein product [Thellungie... 140 1e-031
gi|297852864|ref|XP_002894313.1| photosystem II 5 kD protein [Ar... 139 3e-031
gi|18403499|ref|NP_564589.1| Photosystem II 5 kD protein [Arabid... 135 4e-030
gi|21537121|gb|AAM61462.1| photosystem II [Arabidopsis thaliana] 135 4e-030
gi|2129671|pir||S71280 photosystem II protein psbT - Arabidopsis... 122 3e-026
gi|224054994|ref|XP_002298398.1| predicted protein [Populus tric... 106 3e-021
gi|224106185|ref|XP_002314076.1| predicted protein [Populus tric... 106 3e-021
gi|255544866|ref|XP_002513494.1| Photosystem II 5 kDa protein, c... 94 7e-018
gi|206586409|gb|ACI15739.1| chloroplast photosystem II 5 kDa pre... 84 1e-014
gi|400198|sp|P31336.1|PST2_GOSHI RecName: Full=Photosystem II 5 ... 83 2e-014
gi|255632908|gb|ACU16808.1| unknown [Glycine max] 82 3e-014
gi|225435415|ref|XP_002282731.1| PREDICTED: hypothetical protein... 76 2e-012
gi|226508866|ref|NP_001143858.1| hypothetical protein LOC1002766... 66 3e-009
gi|242062124|ref|XP_002452351.1| hypothetical protein SORBIDRAFT... 65 4e-009
>gi|90186625|gb|ABD91572.1| unknown [Brassica rapa]
Length = 106
Score = 190 bits (481), Expect = 1e-046
Identities = 96/106 (90%), Positives = 101/106 (95%)
Frame = +1
Query: 73 MASMTMTATFLPAVAKLPSPTAGRRMSIVRASTSENTPSLEVKAKEEQSSTTMRRDLMFT 252
MAS+TMTATFLPAVAKLPS T+GRRMS+VRAS SENT SLEVK KEEQSSTTMRRDLMFT
Sbjct: 1 MASITMTATFLPAVAKLPSATSGRRMSVVRASKSENTTSLEVKTKEEQSSTTMRRDLMFT 60
Query: 253 AAASAVCALAKVAMADEEEPKRGTEAAKKKYAQVCVTMPTAKVCRY 390
AAA+AVCALAK AMADEEEPKRGTEAAKKKYAQVCVTMPTAK+CRY
Sbjct: 61 AAAAAVCALAKAAMADEEEPKRGTEAAKKKYAQVCVTMPTAKICRY 106
>gi|18402859|ref|NP_566674.1| photosystem II subunit T [Arabidopsis thaliana]
Length = 103
Score = 181 bits (458), Expect = 5e-044
Identities = 92/106 (86%), Positives = 100/106 (94%), Gaps = 3/106 (2%)
Frame = +1
Query: 73 MASMTMTATFLPAVAKLPSPTAGRRMSIVRASTSENTPSLEVKAKEEQSSTTMRRDLMFT 252
MASMTMTATF PAVAK+PS T GRR+S+VRASTS+NTPSLEVK EQSSTTMRRDLMFT
Sbjct: 1 MASMTMTATFFPAVAKVPSATGGRRLSVVRASTSDNTPSLEVK---EQSSTTMRRDLMFT 57
Query: 253 AAASAVCALAKVAMADEEEPKRGTEAAKKKYAQVCVTMPTAKVCRY 390
AAA+AVC+LAKVAMA+EEEPKRGTEAAKKKYAQVCVTMPTAK+CRY
Sbjct: 58 AAAAAVCSLAKVAMAEEEEPKRGTEAAKKKYAQVCVTMPTAKICRY 103
>gi|297789402|ref|XP_002862672.1| hypothetical protein ARALYDRAFT_920397
[Arabidopsis lyrata subsp. lyrata]
Length = 103
Score = 180 bits (456), Expect = 9e-044
Identities = 91/106 (85%), Positives = 100/106 (94%), Gaps = 3/106 (2%)
Frame = +1
Query: 73 MASMTMTATFLPAVAKLPSPTAGRRMSIVRASTSENTPSLEVKAKEEQSSTTMRRDLMFT 252
MASMTMTATFLPA+AKLPS T GRR+S+VRASTS+NTPSL+VK EQ STTMRRDLMFT
Sbjct: 1 MASMTMTATFLPAIAKLPSATGGRRLSVVRASTSDNTPSLQVK---EQCSTTMRRDLMFT 57
Query: 253 AAASAVCALAKVAMADEEEPKRGTEAAKKKYAQVCVTMPTAKVCRY 390
AAA+AVC+LAKVAMA+EEEPKRGTEAAKKKYAQVCVTMPTAK+CRY
Sbjct: 58 AAAAAVCSLAKVAMAEEEEPKRGTEAAKKKYAQVCVTMPTAKICRY 103
>gi|1465366|emb|CAA66701.1| photosystem II [Arabidopsis thaliana]
Length = 103
Score = 176 bits (445), Expect = 2e-042
Identities = 90/106 (84%), Positives = 98/106 (92%), Gaps = 3/106 (2%)
Frame = +1
Query: 73 MASMTMTATFLPAVAKLPSPTAGRRMSIVRASTSENTPSLEVKAKEEQSSTTMRRDLMFT 252
MASMTMTATF PAVAK+PS T GRR+S+VRASTS+NTPSLEVK EQSSTTMRRDLMFT
Sbjct: 1 MASMTMTATFFPAVAKVPSATGGRRLSVVRASTSDNTPSLEVK---EQSSTTMRRDLMFT 57
Query: 253 AAASAVCALAKVAMADEEEPKRGTEAAKKKYAQVCVTMPTAKVCRY 390
AAA+AVC+LAKVAMA+EEEPKRGTEA KKKYAQVCVTM TAK+CRY
Sbjct: 58 AAAAAVCSLAKVAMAEEEEPKRGTEAGKKKYAQVCVTMRTAKICRY 103
>gi|312283313|dbj|BAJ34522.1| unnamed protein product [Thellungiella halophila]
Length = 106
Score = 140 bits (351), Expect = 1e-031
Identities = 75/108 (69%), Positives = 91/108 (84%), Gaps = 6/108 (5%)
Frame = +1
Query: 73 MASMTMTATFLPAVAKLPSPTAG---RRMSIVRASTSENTPSLEVKAKEEQSSTTMRRDL 243
MASMTMT++FLPAV+KLP+ G R +++V+ASTSENT SLE + +E+ S MRRD+
Sbjct: 1 MASMTMTSSFLPAVSKLPTAITGSNRRSLTVVKASTSENTTSLENRKQEQ--SMKMRRDM 58
Query: 244 MFTAAASAVCALAKVAMADEEEPKRGTEAAKKKYAQVCVTMPTAKVCR 387
+FTAAA+AVC+LAK AMAD EEPKRGTEAAKKKYA VCVTMPTAK+CR
Sbjct: 59 VFTAAAAAVCSLAKAAMAD-EEPKRGTEAAKKKYAPVCVTMPTAKICR 105
>gi|297852864|ref|XP_002894313.1| photosystem II 5 kD protein [Arabidopsis
lyrata subsp. lyrata]
Length = 106
Score = 139 bits (348), Expect = 3e-031
Identities = 75/108 (69%), Positives = 91/108 (84%), Gaps = 6/108 (5%)
Frame = +1
Query: 73 MASMTMTATFLPAVAKLPSPTAG---RRMSIVRASTSENTPSLEVKAKEEQSSTTMRRDL 243
MASMTMT++FLP V+KLP+ +G R +++V+AS SENT SLE K +E+ S MRRDL
Sbjct: 1 MASMTMTSSFLPTVSKLPANISGNSRRSLTVVKASASENTTSLENKKQEQ--SMKMRRDL 58
Query: 244 MFTAAASAVCALAKVAMADEEEPKRGTEAAKKKYAQVCVTMPTAKVCR 387
+FTAAA+AVC+LAKVAMAD EEPKRGTEAAKKKYA VCVTMPTA++CR
Sbjct: 59 VFTAAAAAVCSLAKVAMAD-EEPKRGTEAAKKKYAPVCVTMPTARICR 105
>gi|18403499|ref|NP_564589.1| Photosystem II 5 kD protein [Arabidopsis
thaliana]
Length = 106
Score = 135 bits (338), Expect = 4e-030
Identities = 74/108 (68%), Positives = 89/108 (82%), Gaps = 6/108 (5%)
Frame = +1
Query: 73 MASMTMTATFLPAVAKLP---SPTAGRRMSIVRASTSENTPSLEVKAKEEQSSTTMRRDL 243
MASMTMT++FLP V+ LP S + R +++V+AS SENT SLE K +E+ S MRRDL
Sbjct: 1 MASMTMTSSFLPTVSNLPANISSNSRRSLTVVKASGSENTTSLENKKQEQ--SMKMRRDL 58
Query: 244 MFTAAASAVCALAKVAMADEEEPKRGTEAAKKKYAQVCVTMPTAKVCR 387
+FTAAA+AVC+LAKVAMAD +EPKRGTEAAKKKYA VCVTMPTAK+CR
Sbjct: 59 VFTAAAAAVCSLAKVAMAD-DEPKRGTEAAKKKYAPVCVTMPTAKICR 105
>gi|21537121|gb|AAM61462.1| photosystem II [Arabidopsis thaliana]
Length = 106
Score = 135 bits (338), Expect = 4e-030
Identities = 73/108 (67%), Positives = 89/108 (82%), Gaps = 6/108 (5%)
Frame = +1
Query: 73 MASMTMTATFLPAVAKLP---SPTAGRRMSIVRASTSENTPSLEVKAKEEQSSTTMRRDL 243
MASMTMT++FLP V+ LP S + R +++V+AS SENT SLE KE++ S MRRDL
Sbjct: 1 MASMTMTSSFLPTVSNLPANISSNSRRSLTVVKASGSENTTSLE--NKEQEQSMKMRRDL 58
Query: 244 MFTAAASAVCALAKVAMADEEEPKRGTEAAKKKYAQVCVTMPTAKVCR 387
+FTAAA+AVC+LAKVAMAD +EPKRGTEAAKKKYA VCVTMPTA++CR
Sbjct: 59 VFTAAAAAVCSLAKVAMAD-DEPKRGTEAAKKKYAPVCVTMPTARICR 105
>gi|2129671|pir||S71280 photosystem II protein psbT - Arabidopsis thaliana
Length = 102
Score = 122 bits (305), Expect = 3e-026
Identities = 66/102 (64%), Positives = 77/102 (75%), Gaps = 4/102 (3%)
Frame = +1
Query: 85 TMTATFLPAVAKLPSPTAGRRMSIVRASTSENTPSLEVKAKEEQSSTTMRRDLMFTAAAS 264
TMTATF PAVAK+PS TA + + ++T L + E+ MRRDLMFTAAA+
Sbjct: 5 TMTATFFPAVAKVPSATATKALRSQSLHERQHT-QLRSQGTEQHH---MRRDLMFTAAAA 60
Query: 265 AVCALAKVAMADEEEPKRGTEAAKKKYAQVCVTMPTAKVCRY 390
AVC+LAKVAMA+EEEPKRGTEA KKKYAQVCVTM TAK+CRY
Sbjct: 61 AVCSLAKVAMAEEEEPKRGTEAGKKKYAQVCVTMRTAKICRY 102
>gi|224054994|ref|XP_002298398.1| predicted protein [Populus trichocarpa]
Length = 105
Score = 106 bits (262), Expect = 3e-021
Identities = 54/105 (51%), Positives = 72/105 (68%), Gaps = 1/105 (0%)
Frame = +1
Query: 73 MASMTMTATFLPAVAKLPSPTAGRRMSIVRASTSENTPSLEVKAKEEQSSTTMRRDLMFT 252
MASMTMTA+FL P R ++ A S T + V+ K ++ S++ RRDLMF
Sbjct: 1 MASMTMTASFLAGSTMAKQPLTTPRRGLIVAKASRTTEGVNVEMKNKEESSSGRRDLMFA 60
Query: 253 AAASAVCALAKVAMADEEEPKRGTEAAKKKYAQVCVTMPTAKVCR 387
AAA+A ++A+VA+AD EEP+RGT AKKKYA +CVTMPTA++CR
Sbjct: 61 AAAAAAYSIARVAIAD-EEPERGTPEAKKKYAPICVTMPTARICR 104
>gi|224106185|ref|XP_002314076.1| predicted protein [Populus trichocarpa]
Length = 105
Score = 106 bits (262), Expect = 3e-021
Identities = 59/107 (55%), Positives = 79/107 (73%), Gaps = 5/107 (4%)
Frame = +1
Query: 73 MASMTMTATFL--PAVAKLPSPTAGRRMSIVRASTSENTPSLEVKAKEEQSSTTMRRDLM 246
MAS+TMTA+FL A+AK PS T R + + +AS + ++E+K +EE S RRDLM
Sbjct: 1 MASITMTASFLTGSAMAKQPSTTPRRGLIVAKASRATEGVNVEMKNREESSGG--RRDLM 58
Query: 247 FTAAASAVCALAKVAMADEEEPKRGTEAAKKKYAQVCVTMPTAKVCR 387
F AAA+A ++A+VA+AD EEP+RGT AKKKYA +CVTMPTA++CR
Sbjct: 59 FAAAAAAAYSIARVAIAD-EEPRRGTPEAKKKYAPICVTMPTARICR 104
>gi|255544866|ref|XP_002513494.1| Photosystem II 5 kDa protein, chloroplast
precursor, putative [Ricinus communis]
Length = 106
Score = 94 bits (233), Expect = 7e-018
Identities = 57/108 (52%), Positives = 71/108 (65%), Gaps = 8/108 (7%)
Frame = +1
Query: 73 MASMTMTATFLPAVAKLPSPTAGRRMSIVRASTSENTP----SLEVKAKEEQSSTTMRRD 240
MASMTMTA+FL P R ++ A S+ T ++E+K KEE SS RRD
Sbjct: 1 MASMTMTASFLAGSTLTRQPFTAPRRGLIVAKASKVTEGERVNVEMKNKEESSSG--RRD 58
Query: 241 LMFTAAASAVCALAKVAMADEEEPKRGTEAAKKKYAQVCVTMPTAKVC 384
L+F AAA+A ++AKVAMAD EPK GT AKKKYA +CV+MPTAK+C
Sbjct: 59 LVFAAAAAAAFSVAKVAMAD--EPKAGTLDAKKKYASICVSMPTAKIC 104
>gi|206586409|gb|ACI15739.1| chloroplast photosystem II 5 kDa precursor protein
[Picrorhiza kurrooa]
Length = 102
Score = 84 bits (205), Expect = 1e-014
Identities = 53/104 (50%), Positives = 67/104 (64%), Gaps = 8/104 (7%)
Frame = +1
Query: 85 TMTATFL-PAVAKLPSPTAGR-RMSIVRASTSENTPSLEVKAKEEQSSTTMRRDLMFTAA 258
TMT +F + A PT GR +++VRA S+ + L V KEE ++T RRDLMF A
Sbjct: 5 TMTTSFFCRSAAAKQLPTTGRGGVAMVRA--SKESEKLTVNVKEESNNT--RRDLMFAMA 60
Query: 259 ASAVCALAKVAMADEEEPKRGTEAAKKKYAQVCVTMPTAKVCRY 390
A ++A AMAD EPKRGT AKKKYA VCVT PTA++C+Y
Sbjct: 61 AVVASSIANFAMAD--EPKRGTVEAKKKYAAVCVTNPTARICKY 102
>gi|400198|sp|P31336.1|PST2_GOSHI RecName: Full=Photosystem II 5 kDa protein,
chloroplastic; Short=PSII-T; AltName: Full=Light-regulated unknown 11
kDa protein; Flags: Precursor
Length = 105
Score = 83 bits (204), Expect = 2e-014
Identities = 45/106 (42%), Positives = 65/106 (61%), Gaps = 5/106 (4%)
Frame = +1
Query: 76 ASMTMTATFLPA--VAKLPSPTAGRRMSIVRASTSENTPSLEVKAKEEQSSTTMRRDLMF 249
AS+TMT +FL + K RR+ + A+ S+++ + + RR++MF
Sbjct: 2 ASITMTTSFLSTTNLTKGSPRITQRRLVVANAAKGAQVESVQMSGERKTEGNNGRREMMF 61
Query: 250 TAAASAVCALAKVAMADEEEPKRGTEAAKKKYAQVCVTMPTAKVCR 387
AAA+A+C++A VA A EPKRG+ AKK YA VCVTMPTA++CR
Sbjct: 62 AAAAAAICSVAGVATA---EPKRGSAEAKKAYAPVCVTMPTARICR 104
>gi|255632908|gb|ACU16808.1| unknown [Glycine max]
Length = 104
Score = 82 bits (202), Expect = 3e-014
Identities = 48/105 (45%), Positives = 66/105 (62%), Gaps = 6/105 (5%)
Frame = +1
Query: 79 SMTMTATFL--PAVAKLPSPTAGRRMSIVRASTSENTPSLEVKAKEEQSSTTMRRDLMFT 252
S TMTA+ L P V + RR +V A+ + + +V + + RR+LMF
Sbjct: 3 SFTMTASILGSPTVTNRSAVATQRRSLVVNAAKA--VEAEKVSYDNDMDGSNGRRNLMFA 60
Query: 253 AAASAVCALAKVAMADEEEPKRGTEAAKKKYAQVCVTMPTAKVCR 387
AAA+AVC++A +A+AD EPK GT AKKKYA +CVTMPTA++CR
Sbjct: 61 AAAAAVCSVAGMAVAD--EPKPGTPEAKKKYAPICVTMPTARICR 103
>gi|225435415|ref|XP_002282731.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 122
Score = 76 bits (185), Expect = 2e-012
Identities = 42/92 (45%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Frame = +1
Query: 106 PAVAKLPSPTAGRRMSIVRASTSENTPSLEVKAKEEQSSTTMRRDLMFTAAASAVCALAK 285
P + PS T R ++ A TS PSL +K ++ RRD +F A A A C +AK
Sbjct: 31 PQSKQHPSTTTTARRGLLMAKTSRQEPSLNLKNSSKEDRRNGRRDFVFAATAPAACTVAK 90
Query: 286 VAMADEEEPKRGTEAAKKKYAQVCVTMPTAKV 381
+AMAD +PK GT A KK+A VCVTMPTA++
Sbjct: 91 IAMAD--DPKVGTPEA-KKHAAVCVTMPTARI 119
>gi|226508866|ref|NP_001143858.1| hypothetical protein LOC100276652 [Zea mays]
Length = 104
Score = 66 bits (159), Expect = 3e-009
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 8/105 (7%)
Frame = +1
Query: 79 SMTMTATFLPAVAKLPSPTAGRRMSIVRASTSENTPS-LEVKAKEEQSSTTMRRDLMFTA 255
S+TM A+F A + +P+ ++VR++ + + A E + + RR +M A
Sbjct: 3 SLTMMASF--AAVAVAAPSRRGTFAVVRSAKVDRCQEPATLAATEARPAADGRRAVMLAA 60
Query: 256 AASAVCAL--AKVAMADEEEPKRGTEAAKKKYAQVCVTMPTAKVC 384
AA+AV A+ A AMA PK GT AKKKYA +CVTMPTAKVC
Sbjct: 61 AAAAVAAIGGAGAAMAG---PKNGTPEAKKKYAAICVTMPTAKVC 102
>gi|242062124|ref|XP_002452351.1| hypothetical protein SORBIDRAFT_04g024130
[Sorghum bicolor]
Length = 152
Score = 65 bits (157), Expect = 4e-009
Identities = 46/115 (40%), Positives = 59/115 (51%), Gaps = 12/115 (10%)
Frame = +1
Query: 67 QAMASMTMTATFLPAVAKLPS------PTAGRRMSIVRASTSENTPSLEV-KAKEEQSST 225
+AMAS+TM A+F PS + R E S + A +
Sbjct: 39 KAMASLTMMASFAAVAVAAPSRRGSFAVVRAANKADHRCHQQEEPASARLAAAAAAEEPA 98
Query: 226 TMRRDLMFTAAASAVCAL--AKVAMADEEEPKRGTEAAKKKYAQVCVTMPTAKVC 384
RR +M AAA+AV A+ A AMAD PK+G+ AKKKYA +CVTMPTAK+C
Sbjct: 99 EGRRAVMLAAAAAAVAAIGGAGAAMAD---PKKGSPEAKKKYAPICVTMPTAKIC 150
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,398,412,446,239
Number of Sequences: 15229318
Number of Extensions: 4398412446239
Number of Successful Extensions: 1041631018
Number of sequences better than 0.0: 0
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