BLASTX 7.6.2
Query= UN39832 /QuerySize=550
(549 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G21055.1 | Symbols: PSBTN | PSBTN (photosystem... 181 2e-046
TAIR9_protein||AT1G51400.1 | Symbols: | photosystem II 5 kD pro... 135 2e-032
>TAIR9_protein||AT3G21055.1 | Symbols: PSBTN | PSBTN (photosystem II subunit T)
| chr3:7376761-7377072 REVERSE
Length = 104
Score = 181 bits (459), Expect = 2e-046
Identities = 92/107 (85%), Positives = 100/107 (93%), Gaps = 3/107 (2%)
Frame = +1
Query: 73 MASMTMTATFLPAVAKLPSPTAGRRMSIVRASTSENTPSLEVKAKEEQSSTTMRRDLMFT 252
MASMTMTATF PAVAK+PS T GRR+S+VRASTS+NTPSLEVK EQSSTTMRRDLMFT
Sbjct: 1 MASMTMTATFFPAVAKVPSATGGRRLSVVRASTSDNTPSLEVK---EQSSTTMRRDLMFT 57
Query: 253 AAASAVCALAKVAMADEEEPKRGTEAAKKKYAQVCVTMPTAKVCRY* 393
AAA+AVC+LAKVAMA+EEEPKRGTEAAKKKYAQVCVTMPTAK+CRY*
Sbjct: 58 AAAAAVCSLAKVAMAEEEEPKRGTEAAKKKYAQVCVTMPTAKICRY* 104
>TAIR9_protein||AT1G51400.1 | Symbols: | photosystem II 5 kD protein |
chr1:19052172-19052492 REVERSE
Length = 107
Score = 135 bits (338), Expect = 2e-032
Identities = 74/108 (68%), Positives = 89/108 (82%), Gaps = 6/108 (5%)
Frame = +1
Query: 73 MASMTMTATFLPAVAKLP---SPTAGRRMSIVRASTSENTPSLEVKAKEEQSSTTMRRDL 243
MASMTMT++FLP V+ LP S + R +++V+AS SENT SLE K +E+ S MRRDL
Sbjct: 1 MASMTMTSSFLPTVSNLPANISSNSRRSLTVVKASGSENTTSLENKKQEQ--SMKMRRDL 58
Query: 244 MFTAAASAVCALAKVAMADEEEPKRGTEAAKKKYAQVCVTMPTAKVCR 387
+FTAAA+AVC+LAKVAMAD +EPKRGTEAAKKKYA VCVTMPTAK+CR
Sbjct: 59 VFTAAAAAVCSLAKVAMAD-DEPKRGTEAAKKKYAPVCVTMPTAKICR 105
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,928,674,532
Number of Sequences: 33410
Number of Extensions: 19928674532
Number of Successful Extensions: 642080210
Number of sequences better than 0.0: 0
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