BLASTX 7.6.2
Query= UN39858 /QuerySize=1199
(1198 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G23540.1 | Symbols: | 26S proteasome regulato... 613 8e-176
TAIR9_protein||AT5G23540.2 | Symbols: | 26S proteasome regulato... 517 6e-147
TAIR9_protein||AT1G71230.1 | Symbols: CSN5B, CSN5, AJH2 | CSN5B ... 132 7e-031
TAIR9_protein||AT1G22920.1 | Symbols: CSN5A, JAB1, AJH1 | CSN5A ... 129 3e-030
TAIR9_protein||AT1G22920.2 | Symbols: CSN5A, JAB1, AJH1 | CSN5A ... 129 3e-030
TAIR9_protein||AT1G10840.1 | Symbols: TIF3H1 | TIF3H1; translati... 51 1e-006
>TAIR9_protein||AT5G23540.1 | Symbols: | 26S proteasome regulatory subunit,
putative | chr5:7937772-7939339 FORWARD
Length = 309
Score = 613 bits (1580), Expect = 8e-176
Identities = 307/309 (99%), Positives = 308/309 (99%)
Frame = -3
Query: 1124 MERLQRIFGAGGGLGHASPDSPTLDTSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEF 945
MERLQRIFGAGGGLGHASPDSPTLDTSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEF
Sbjct: 1 MERLQRIFGAGGGLGHASPDSPTLDTSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEF 60
Query: 944 VDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCW 765
VDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCW
Sbjct: 61 VDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCW 120
Query: 764 LSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRSINPQTIMLGQEPRQTTSNL 585
LSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRSINPQTIMLGQEPRQTTSNL
Sbjct: 121 LSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRSINPQTIMLGQEPRQTTSNL 180
Query: 584 GHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKTN 405
GHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKTN
Sbjct: 181 GHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKTN 240
Query: 404 EQTVQEMLNLAAKYNKAVQEEDELSPEKLAIVNVGRQDAKKHLEEHVSNLMSSNIVQTLG 225
EQTVQEML+LAAKYNKAVQEEDELSPEKLAIVNVGRQDAKKHLEEHVSNLMSSNIVQTLG
Sbjct: 241 EQTVQEMLSLAAKYNKAVQEEDELSPEKLAIVNVGRQDAKKHLEEHVSNLMSSNIVQTLG 300
Query: 224 TMLDTVVF* 198
TMLDTVVF*
Sbjct: 301 TMLDTVVF* 309
>TAIR9_protein||AT5G23540.2 | Symbols: | 26S proteasome regulatory subunit,
putative | chr5:7938109-7939339 FORWARD
Length = 260
Score = 517 bits (1331), Expect = 6e-147
Identities = 258/260 (99%), Positives = 259/260 (99%)
Frame = -3
Query: 977 MEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVG 798
MEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVG
Sbjct: 1 MEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVG 60
Query: 797 WYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRSINPQTIML 618
WYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRSINPQTIML
Sbjct: 61 WYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRSINPQTIML 120
Query: 617 GQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLT 438
GQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLT
Sbjct: 121 GQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLT 180
Query: 437 LRRFDTHSKTNEQTVQEMLNLAAKYNKAVQEEDELSPEKLAIVNVGRQDAKKHLEEHVSN 258
LRRFDTHSKTNEQTVQEML+LAAKYNKAVQEEDELSPEKLAIVNVGRQDAKKHLEEHVSN
Sbjct: 181 LRRFDTHSKTNEQTVQEMLSLAAKYNKAVQEEDELSPEKLAIVNVGRQDAKKHLEEHVSN 240
Query: 257 LMSSNIVQTLGTMLDTVVF* 198
LMSSNIVQTLGTMLDTVVF*
Sbjct: 241 LMSSNIVQTLGTMLDTVVF* 260
>TAIR9_protein||AT1G71230.1 | Symbols: CSN5B, CSN5, AJH2 | CSN5B
(COP9-SIGNALOSOME 5B); protein binding | chr1:26852560-26854255
FORWARD
Length = 359
Score = 132 bits (330), Expect = 7e-031
Identities = 81/206 (39%), Positives = 120/206 (58%), Gaps = 11/206 (5%)
Frame = -3
Query: 1043 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVD 864
++V IS+LALLKM+ H R+G +E+MGLM G+ D T+ V+D FA+P GT V A D
Sbjct: 57 KRVKISALALLKMVVHARSGGTIEIMGLMQGK-TDGDTIIVMDAFALPVEGTETRVNAQD 115
Query: 863 HVFQ--TNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVD 690
++ K GR E VVGWYHSHPG+GCWLSG+D++TQ+ + + +AVV+D
Sbjct: 116 DAYEYMVEYSQTNKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQRLNQQHQEPFLAVVID 175
Query: 689 PIQSVK-GKVVIDAFRSINPQTIMLGQEPRQTTSNLGHLNKPSIQAL-IHGLNRHYYSIA 516
P ++V GKV I AFR+ + + P + S + I+ +H + YYS+
Sbjct: 176 PTRTVSAGKVEIGAFRTYSKGY----KPPDEPVSEYQTIPLNKIEDFGVH--CKQYYSLD 229
Query: 515 INYRKNELEEKMLLNLHKKKWTDGLT 438
+ Y K+ L+ +L L K W + L+
Sbjct: 230 VTYFKSSLDSHLLDLLWNKYWVNTLS 255
>TAIR9_protein||AT1G22920.1 | Symbols: CSN5A, JAB1, AJH1 | CSN5A (COP9
SIGNALOSOME 5A) | chr1:8109882-8111895 REVERSE
Length = 358
Score = 129 bits (324), Expect = 3e-030
Identities = 79/207 (38%), Positives = 117/207 (56%), Gaps = 13/207 (6%)
Frame = -3
Query: 1043 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVD 864
++V+IS+LALLKM+ H R+G +E+MGLM G+ + T+ V+D FA+P GT V A
Sbjct: 57 KRVHISALALLKMVVHARSGGTIEIMGLMQGK-TEGDTIIVMDAFALPVEGTETRVNAQS 115
Query: 863 HVFQ--TNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVD 690
++ K GR E VVGWYHSHPG+GCWLSG+D++TQ + + +AVV+D
Sbjct: 116 DAYEYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVID 175
Query: 689 PIQSVK-GKVVIDAFRSINPQTIMLGQE--PRQTTSNLGHLNKPSIQALIHGLNRHYYSI 519
P ++V GKV I AFR+ P+ + + T L + + + YYS+
Sbjct: 176 PTRTVSAGKVEIGAFRTY-PEGHKISDDHVSEYQTIPLNKIEDFGVHC------KQYYSL 228
Query: 518 AINYRKNELEEKMLLNLHKKKWTDGLT 438
I Y K+ L+ +L L K W + L+
Sbjct: 229 DITYFKSSLDSHLLDLLWNKYWVNTLS 255
>TAIR9_protein||AT1G22920.2 | Symbols: CSN5A, JAB1, AJH1 | CSN5A (COP9
SIGNALOSOME 5A) | chr1:8109998-8111895 REVERSE
Length = 352
Score = 129 bits (324), Expect = 3e-030
Identities = 79/207 (38%), Positives = 117/207 (56%), Gaps = 13/207 (6%)
Frame = -3
Query: 1043 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVD 864
++V+IS+LALLKM+ H R+G +E+MGLM G+ + T+ V+D FA+P GT V A
Sbjct: 57 KRVHISALALLKMVVHARSGGTIEIMGLMQGK-TEGDTIIVMDAFALPVEGTETRVNAQS 115
Query: 863 HVFQ--TNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVD 690
++ K GR E VVGWYHSHPG+GCWLSG+D++TQ + + +AVV+D
Sbjct: 116 DAYEYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVID 175
Query: 689 PIQSVK-GKVVIDAFRSINPQTIMLGQE--PRQTTSNLGHLNKPSIQALIHGLNRHYYSI 519
P ++V GKV I AFR+ P+ + + T L + + + YYS+
Sbjct: 176 PTRTVSAGKVEIGAFRTY-PEGHKISDDHVSEYQTIPLNKIEDFGVHC------KQYYSL 228
Query: 518 AINYRKNELEEKMLLNLHKKKWTDGLT 438
I Y K+ L+ +L L K W + L+
Sbjct: 229 DITYFKSSLDSHLLDLLWNKYWVNTLS 255
>TAIR9_protein||AT1G10840.1 | Symbols: TIF3H1 | TIF3H1; translation initiation
factor | chr1:3607885-3610299 REVERSE
Length = 338
Score = 51 bits (120), Expect = 1e-006
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 2/143 (1%)
Frame = -3
Query: 1073 SPDSPTLDTSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQS 894
S D V I LA+LK++KH + P V G +LG V + V + F P
Sbjct: 13 SKDEAVAPPLRVVQIEGLAVLKIIKHCKEFSPTLVTGQLLGLDVGS-VLEVTNCFPFPVR 71
Query: 893 GTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQ 714
+EA +Q M+ L++ VGWY S G + + I T +++ +
Sbjct: 72 DDDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQS-TVLGSYQTVELIETFMNYQENIK 130
Query: 713 RAVAVVVDPIQSVKGKVVIDAFR 645
R V ++ DP ++ G + + A +
Sbjct: 131 RCVCIIYDPSKADLGVLALKALK 153
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,928,674,532
Number of Sequences: 33410
Number of Extensions: 19928674532
Number of Successful Extensions: 642080210
Number of sequences better than 0.0: 0
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