BLASTX 7.6.2
Query= UN39899 /QuerySize=873
(872 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G44065.1 | Symbols: | ribosomal protein L2 fa... 235 5e-062
TAIR9_protein||AT2G44065.2 | Symbols: | ribosomal protein L2 fa... 235 5e-062
TAIR9_protein||ATCG00830.1 | Symbols: RPL2.1 | encodes a chlorop... 67 1e-011
TAIR9_protein||ATCG01310.1 | Symbols: RPL2.2 | encodes a chlorop... 67 1e-011
TAIR9_protein||AT3G51190.1 | Symbols: | structural constituent ... 56 3e-008
>TAIR9_protein||AT2G44065.1 | Symbols: | ribosomal protein L2 family protein |
chr2:18228860-18230368 FORWARD
Length = 215
Score = 235 bits (597), Expect = 5e-062
Identities = 116/134 (86%), Positives = 127/134 (94%), Gaps = 2/134 (1%)
Frame = -3
Query: 810 MSALVALCRARASSSSSSSLFNSLVRPAFRSFSTAFGDVQNKTLVAEMEEKMLHMDINSM 631
MS LVALCRARA S+SSSLFNS++RPAFR+FST F D QNK+LVA+M+E+MLHMDINSM
Sbjct: 1 MSGLVALCRARA--SASSSLFNSVIRPAFRNFSTGFADTQNKSLVAQMKEEMLHMDINSM 58
Query: 630 IGSSMPLGMMRIGTIIHNIEMNPGQGAKLVRAAGTNAKILKEPASGKCLIKLPSGDTRWI 451
IGSSMPLGMMRIGTIIHNIEMNPGQGAK+VRAAGTNAKILKEPA GKCLIKLPSGDT+WI
Sbjct: 59 IGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKCLIKLPSGDTKWI 118
Query: 450 NARCRATIGTVSNP 409
NA+CRATIGTVSNP
Sbjct: 119 NAKCRATIGTVSNP 132
Score = 160 bits (404), Expect = 1e-039
Identities = 73/75 (97%)
Frame = -1
Query: 410 PSHGVKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKIKSSGSRGRTSVSPWGKPC 231
PSHG KKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGK KSSGSRGRTSVSPWGKPC
Sbjct: 132 PSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKSKSSGSRGRTSVSPWGKPC 191
Query: 230 KGGYKSASVKKKKKR 186
KGGYKSASVKKKKKR
Sbjct: 192 KGGYKSASVKKKKKR 206
>TAIR9_protein||AT2G44065.2 | Symbols: | ribosomal protein L2 family protein |
chr2:18228860-18230368 FORWARD
Length = 215
Score = 235 bits (597), Expect = 5e-062
Identities = 116/134 (86%), Positives = 127/134 (94%), Gaps = 2/134 (1%)
Frame = -3
Query: 810 MSALVALCRARASSSSSSSLFNSLVRPAFRSFSTAFGDVQNKTLVAEMEEKMLHMDINSM 631
MS LVALCRARA S+SSSLFNS++RPAFR+FST F D QNK+LVA+M+E+MLHMDINSM
Sbjct: 1 MSGLVALCRARA--SASSSLFNSVIRPAFRNFSTGFADTQNKSLVAQMKEEMLHMDINSM 58
Query: 630 IGSSMPLGMMRIGTIIHNIEMNPGQGAKLVRAAGTNAKILKEPASGKCLIKLPSGDTRWI 451
IGSSMPLGMMRIGTIIHNIEMNPGQGAK+VRAAGTNAKILKEPA GKCLIKLPSGDT+WI
Sbjct: 59 IGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKCLIKLPSGDTKWI 118
Query: 450 NARCRATIGTVSNP 409
NA+CRATIGTVSNP
Sbjct: 119 NAKCRATIGTVSNP 132
Score = 160 bits (404), Expect = 1e-039
Identities = 73/75 (97%)
Frame = -1
Query: 410 PSHGVKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKIKSSGSRGRTSVSPWGKPC 231
PSHG KKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGK KSSGSRGRTSVSPWGKPC
Sbjct: 132 PSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKSKSSGSRGRTSVSPWGKPC 191
Query: 230 KGGYKSASVKKKKKR 186
KGGYKSASVKKKKKR
Sbjct: 192 KGGYKSASVKKKKKR 206
>TAIR9_protein||ATCG00830.1 | Symbols: RPL2.1 | encodes a chloroplast ribosomal
protein L2, a constituent of the large subunit of the ribosomal complex
| chrC:84337-85843 REVERSE
Length = 275
Score = 67 bits (163), Expect = 1e-011
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = -3
Query: 630 IGSSMPLGMMRIGTIIHNIEMNPGQGAKLVRAAGTNAKILKEPASGKCLIKLPSGDTRWI 451
+G+++PL M +GT IHNIE+ G+G +L RAAG AK++ + L KLPSG+ R I
Sbjct: 124 MGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLI 182
Query: 450 NARCRATIGTVSN 412
+ C AT+G V N
Sbjct: 183 SKNCSATVGQVGN 195
Score = 66 bits (160), Expect = 2e-011
Identities = 34/69 (49%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Frame = -1
Query: 395 KKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKIKSSGSRGRTSVSPWGKPCKGGYK 216
K L +AG WLG RP VRGV MNP DHPHGGGEG+ + V+PWG P G
Sbjct: 201 KSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKK---PVTPWGYPALG--- 254
Query: 215 SASVKKKKK 189
+K+KK
Sbjct: 255 -RRTRKRKK 262
>TAIR9_protein||ATCG01310.1 | Symbols: RPL2.2 | encodes a chloroplast ribosomal
protein L2, a constituent of the large subunit of the ribosomal complex
| chrC:152806-154312 FORWARD
Length = 275
Score = 67 bits (163), Expect = 1e-011
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = -3
Query: 630 IGSSMPLGMMRIGTIIHNIEMNPGQGAKLVRAAGTNAKILKEPASGKCLIKLPSGDTRWI 451
+G+++PL M +GT IHNIE+ G+G +L RAAG AK++ + L KLPSG+ R I
Sbjct: 124 MGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLI 182
Query: 450 NARCRATIGTVSN 412
+ C AT+G V N
Sbjct: 183 SKNCSATVGQVGN 195
Score = 66 bits (160), Expect = 2e-011
Identities = 34/69 (49%), Positives = 40/69 (57%), Gaps = 7/69 (10%)
Frame = -1
Query: 395 KKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKIKSSGSRGRTSVSPWGKPCKGGYK 216
K L +AG WLG RP VRGV MNP DHPHGGGEG+ + V+PWG P G
Sbjct: 201 KSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKK---PVTPWGYPALG--- 254
Query: 215 SASVKKKKK 189
+K+KK
Sbjct: 255 -RRTRKRKK 262
>TAIR9_protein||AT3G51190.1 | Symbols: | structural constituent of ribosome |
chr3:19016606-19017547 REVERSE
Length = 261
Score = 56 bits (133), Expect = 3e-008
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = -3
Query: 639 NSMIGSSMPLGMMRIGTIIHNIEMNPGQGAKLVRAAGTNAKIL-KEPASGKCLIKLPSGD 463
N M+G+ +PLG + G +I N+E++ G L RA+G A ++ P S +KLPSG
Sbjct: 96 NLMVGNVLPLGSIPEGAVICNVELHVGDRGALARASGDYAIVIAHNPESNTTRVKLPSGS 155
Query: 462 TRWINARCRATIGTVS 415
+ + + CRA IG V+
Sbjct: 156 KKILPSACRAMIGQVA 171
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,928,674,532
Number of Sequences: 33410
Number of Extensions: 19928674532
Number of Successful Extensions: 642080210
Number of sequences better than 0.0: 0
|
