BLASTX 7.6.2
Query= UN39930 /QuerySize=1020
(1019 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297825411|ref|XP_002880588.1| ATRPA2/ROR1/RPA2 [Arabidopsis l... 463 3e-128
gi|18400560|ref|NP_565571.1| replicon protein A2 [Arabidopsis th... 454 2e-125
gi|225446038|ref|XP_002268721.1| PREDICTED: hypothetical protein... 272 6e-071
gi|225429793|ref|XP_002282796.1| PREDICTED: hypothetical protein... 270 3e-070
gi|255634690|gb|ACU17707.1| unknown [Glycine max] 256 5e-066
gi|68299229|emb|CAJ13715.1| putative replication factor A [Capsi... 247 4e-063
gi|31790111|gb|AAP58374.1| RPA 32kDa [Pisum sativum] 244 2e-062
gi|224121196|ref|XP_002330767.1| predicted protein [Populus tric... 242 7e-062
gi|255574103|ref|XP_002527967.1| Replication protein A 30 kDa su... 213 5e-053
gi|294460336|gb|ADE75749.1| unknown [Picea sitchensis] 200 3e-049
gi|297832926|ref|XP_002884345.1| hypothetical protein ARALYDRAFT... 193 4e-047
gi|330318724|gb|AEC11022.1| replication protein a 30 kda subunit... 191 2e-046
gi|18396383|ref|NP_566188.1| replication factor A2 [Arabidopsis ... 188 2e-045
gi|115450003|ref|NP_001048604.1| Os02g0829100 [Oryza sativa Japo... 180 4e-043
gi|218191867|gb|EEC74294.1| hypothetical protein OsI_09546 [Oryz... 179 6e-043
gi|195619742|gb|ACG31701.1| replication protein A 32 kDa subunit... 175 1e-041
gi|194693140|gb|ACF80654.1| unknown [Zea mays] 174 3e-041
gi|326520341|dbj|BAK07429.1| predicted protein [Hordeum vulgare ... 173 4e-041
gi|242067082|ref|XP_002454830.1| hypothetical protein SORBIDRAFT... 172 1e-040
gi|334185046|ref|NP_001189796.1| replication factor A2 [Arabidop... 164 2e-038
>gi|297825411|ref|XP_002880588.1| ATRPA2/ROR1/RPA2 [Arabidopsis lyrata subsp.
lyrata]
Length = 279
Score = 463 bits (1189), Expect = 3e-128
Identities = 233/280 (83%), Positives = 251/280 (89%), Gaps = 10/280 (3%)
Frame = +2
Query: 53 MFSNSQFEPNSAFSGGGFMSSQPTQPYESSSSSSTTK---GIVPVTVKQINESSHSGGEK 223
MFS+SQFEPNSAFSGGGFMSSQP+Q YESSSS++ + G+VPVTVKQI E + GEK
Sbjct: 1 MFSSSQFEPNSAFSGGGFMSSQPSQAYESSSSTAKNREFQGLVPVTVKQITECFQTSGEK 60
Query: 224 SGIVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQ 403
SG+VINGI LTNVSLVGLVCDKDVSKVTEV+FTLDDGTGRIDCKRWVNE+FDAREMESV+
Sbjct: 61 SGLVINGISLTNVSLVGLVCDKDVSKVTEVRFTLDDGTGRIDCKRWVNETFDAREMESVR 120
Query: 404 DGTYVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNFESQLGQQVGDA 583
DGTYVR+NGHLKTFQG QLLVFSVRPI+DFNEVTFHYIECIHFYS+N ESQ GQQVGD
Sbjct: 121 DGTYVRVNGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQ-GQQVGDV 179
Query: 584 TQSHTV------NANQATTLNPVMPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLD 745
TQS N NQAT LNPV+ SQN+DGNGRKNLDDMILDYLKQPACTARQQGIH+D
Sbjct: 180 TQSVNTTFQGGSNTNQATPLNPVVSSQNNDGNGRKNLDDMILDYLKQPACTARQQGIHID 239
Query: 746 EIAQQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFKHVEL 865
EIAQQLKVPKNKLEGV+QSLEGDGLIYSTIDEYHFKHVEL
Sbjct: 240 EIAQQLKVPKNKLEGVVQSLEGDGLIYSTIDEYHFKHVEL 279
>gi|18400560|ref|NP_565571.1| replicon protein A2 [Arabidopsis thaliana]
Length = 279
Score = 454 bits (1166), Expect = 2e-125
Identities = 229/280 (81%), Positives = 248/280 (88%), Gaps = 10/280 (3%)
Frame = +2
Query: 53 MFSNSQFEPNSAFSGGGFMSSQPTQPYESSSSSSTTK---GIVPVTVKQINESSHSGGEK 223
MFS+SQFEPNS FSGGGFMSSQP+Q YESSSS++ + G+VPVTVKQI E S GEK
Sbjct: 1 MFSSSQFEPNSGFSGGGFMSSQPSQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEK 60
Query: 224 SGIVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQ 403
SG+VINGI LTNVSLVGLVCDKD SKVTEV+FTLDDGTGRIDCKRWV+E+FDAREMESV+
Sbjct: 61 SGLVINGISLTNVSLVGLVCDKDESKVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVR 120
Query: 404 DGTYVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNFESQLGQQVGDA 583
DGTYVRL+GHLKTFQG QLLVFSVRPI+DFNEVTFHYIECIHFYS+N ESQ QQVGD
Sbjct: 121 DGTYVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQ-RQQVGDV 179
Query: 584 TQSHTV------NANQATTLNPVMPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLD 745
TQS N NQAT LNPV+ SQN+DGNGRKNLDDMILDYLKQPACTARQQGIH+D
Sbjct: 180 TQSVNTTFQGGSNTNQATLLNPVVSSQNNDGNGRKNLDDMILDYLKQPACTARQQGIHID 239
Query: 746 EIAQQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFKHVEL 865
EIAQQLK+PKNKLEGV+QSLEGDGLIYSTIDEYHFKHVEL
Sbjct: 240 EIAQQLKIPKNKLEGVVQSLEGDGLIYSTIDEYHFKHVEL 279
>gi|225446038|ref|XP_002268721.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 277
Score = 272 bits (695), Expect = 6e-071
Identities = 141/275 (51%), Positives = 192/275 (69%), Gaps = 11/275 (4%)
Frame = +2
Query: 53 MFSNSQFEPNSAFSGGGFMSSQPTQPYE---SSSSSSTTKGIVPVTVKQINESSHSGGEK 223
M+S+SQF+ N+AFSGGGFM SQ TQ E S + + T+ ++P+TVKQI+E+ S +K
Sbjct: 1 MYSHSQFDGNAAFSGGGFMPSQATQAAEPGFSPARNRDTQALLPLTVKQISEAFLSSDDK 60
Query: 224 SGIVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQ 403
S +I+G+E+ NV+LVG+V +K +VT+V F LDDGTGRIDC RWVNE+ D +EME +
Sbjct: 61 SNFLIDGVEVNNVTLVGMVFNK-AERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGIL 119
Query: 404 DGTYVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNFESQLGQQVGDA 583
DG YVR++GHLK FQG + L VFS+RP+ DFNE+ H+IECI+ + N +S++ Q G
Sbjct: 120 DGMYVRVHGHLKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSRV--QAGGP 177
Query: 584 TQSHTVNANQATTLNPVMPSQNSD-----GNGRKNLDDMILDYLKQPACTARQQGIHLDE 748
TQSH N T L SQ + G G K +D +++DYL+QP AR QG+ DE
Sbjct: 178 TQSHVTNPAIGTPLKGYQASQPNQFSGQYGAGLKGVDQLVIDYLQQPQSLARDQGVGRDE 237
Query: 749 IAQQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 853
+AQQL VP +K+ I+SLE +GLIYSTIDE+H+K
Sbjct: 238 LAQQLNVPVDKIMESIRSLEEEGLIYSTIDEWHYK 272
>gi|225429793|ref|XP_002282796.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 268
Score = 270 bits (689), Expect = 3e-070
Identities = 135/263 (51%), Positives = 185/263 (70%), Gaps = 5/263 (1%)
Frame = +2
Query: 65 SQFEPNSAFSGGGFMSSQPTQPYESSSSSSTTKGIVPVTVKQINESSHSGGEKSGIVING 244
SQF+P S GGF SSQ T SS+ S T+G++PVTVKQI+E+SHSG +KS I+G
Sbjct: 6 SQFDPFS----GGFSSSQSTDSGVSSAKSRETQGLIPVTVKQISEASHSGDDKSNFQIDG 61
Query: 245 IELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTYVRL 424
+++TN++LVG+V DK +VT+V F LDDGTGRI+CKRWVNE+FD REME++ DG YVRL
Sbjct: 62 VDVTNITLVGMVFDKS-ERVTDVSFALDDGTGRIECKRWVNEAFDTREMENISDGIYVRL 120
Query: 425 NGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNFESQLGQQVGDATQSHTVN 604
NGHL++ GN+QL+ FSVRP+ +F+E+ FH+IE IH + KN +++L S +V
Sbjct: 121 NGHLRSSGGNRQLVAFSVRPVTNFDEIAFHFIEVIHLHLKNSKTRLPSDALTQPLSASVK 180
Query: 605 ANQATTLNPVMPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLDEIAQQLKVPKNKL 784
P +G K LD M+LDYL+QP+ R++GIH DE++QQLK+ K+
Sbjct: 181 TESTGYQTPSSQLSAQSVDGVKGLDQMVLDYLQQPSNYDREKGIHRDELSQQLKISTEKI 240
Query: 785 EGVIQSLEGDGLIYSTIDEYHFK 853
I++LE +GLIYSTIDE+H+K
Sbjct: 241 MESIRTLEEEGLIYSTIDEFHYK 263
>gi|255634690|gb|ACU17707.1| unknown [Glycine max]
Length = 292
Score = 256 bits (653), Expect = 5e-066
Identities = 134/282 (47%), Positives = 198/282 (70%), Gaps = 13/282 (4%)
Frame = +2
Query: 38 LSR-KKMFSNSQFEPNSAFSGGGFMSSQPTQPYESS---SSSSTTKGIVPVTVKQINESS 205
LSR KMFS SQF+ +AFSGGGF SSQP+ +SS S+S T G+VPVTVKQI+E+S
Sbjct: 12 LSRVSKMFSGSQFDTTTAFSGGGFTSSQPSTLNDSSPAPSNSRETPGLVPVTVKQISEAS 71
Query: 206 HSGGEKSGIVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAR 385
SG EKS VING++L NV+LVG++ +K V + T+V F LDDGTGRI C+RW+NE+FD +
Sbjct: 72 QSGDEKSNFVINGVDLNNVTLVGMMFEK-VERNTDVSFVLDDGTGRIKCRRWINEAFDTK 130
Query: 386 EMESVQDGTYVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNFESQLG 565
EME+V + YVR+ GHLK+FQG +QL+ FSVRP+ +F+E+ FH+I+CIH + ++ G
Sbjct: 131 EMEAVMNDMYVRVYGHLKSFQGVKQLVAFSVRPVTNFDEIPFHFIDCIHNHLRSKIKVEG 190
Query: 566 QQVGDATQSHTVNA------NQATTLNPVMPSQNSDGNGRKNLDDMILDYLKQPACTARQ 727
+ + ++ N++ NPV ++ D G K +D +++DYL+Q + +
Sbjct: 191 ITSANPSSGSSLETPVKSAPNRSQASNPVCAQRSVD--GLKGIDKLVMDYLEQHSDRSDG 248
Query: 728 QGIHLDEIAQQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 853
+GIH+DE++++LK+P K++ +++L DG IYSTID+ H+K
Sbjct: 249 RGIHVDELSRELKLPIEKIKLSLKTLADDGEIYSTIDDDHYK 290
>gi|68299229|emb|CAJ13715.1| putative replication factor A [Capsicum chinense]
Length = 299
Score = 247 bits (628), Expect = 4e-063
Identities = 125/284 (44%), Positives = 189/284 (66%), Gaps = 15/284 (5%)
Frame = +2
Query: 35 HLSRKKMFSNSQFEPNSAFSGGGFMSSQPTQPYESSSSSST----TKGIVPVTVKQINES 202
H R N+QF+ N+AFSGGGFM SQ TQ S S T ++ ++P+TVKQI+E+
Sbjct: 15 HTERAMYGGNNQFDGNAAFSGGGFMPSQATQTASDHSFSPTKNRDSQTLIPLTVKQISEA 74
Query: 203 SHSGGEKSGIVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDA 382
S +K+ +I+G+++ NV LVG++ +K +T V F +DDGTGR+DC RWVNE+ D
Sbjct: 75 FQSSDDKTNFLIDGVDVNNVKLVGILFNK-AEMLTAVSFVVDDGTGRLDCFRWVNEAVDT 133
Query: 383 REMESVQDGTYVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNF---- 550
+EME++ +G YVR++GHLK FQG +QL+ +SVRP+ D+NE+ H+ E I+ +S N
Sbjct: 134 KEMEALTNGIYVRVHGHLKGFQGKKQLMAYSVRPVDDYNEIASHFAEVIYVHSYNSRLRK 193
Query: 551 ---ESQLGQQVGDATQSHTVNANQATTLNPVMPSQNSDGNGRKNLDDMILDYLKQPACTA 721
S + QV ++ + + QA+ N P N DG G + M+LDYL+QP+C A
Sbjct: 194 QQDSSFMSAQVPSSSFNTPLKGYQASASNQ-FPGFNMDGIG--GVHKMVLDYLQQPSCLA 250
Query: 722 RQQGIHLDEIAQQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 853
++G+H +E+AQQL+VP K+ G +++LE +GL+YSTID++H+K
Sbjct: 251 LEKGVHRNELAQQLRVPSEKIMGAMEALESEGLVYSTIDDFHYK 294
>gi|31790111|gb|AAP58374.1| RPA 32kDa [Pisum sativum]
Length = 273
Score = 244 bits (622), Expect = 2e-062
Identities = 122/271 (45%), Positives = 186/271 (68%), Gaps = 6/271 (2%)
Frame = +2
Query: 56 FSNSQFEPNSAFSGGGFMSSQPTQPYESSSSSSTTKGIVPVTVKQINESSHSGGEKSGIV 235
FS+SQF+ ++AFSGGGF SSQ + + + S ++G+VPVTVKQI+E+S SG EKS
Sbjct: 2 FSSSQFDSSNAFSGGGFTSSQLNESSPAPTKSRDSQGLVPVTVKQISEASQSGDEKSNFA 61
Query: 236 INGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTY 415
ING++LTNV+LVG+V +K + T+V F LDDGTGRI C+RWVNE+FD++EME V + Y
Sbjct: 62 INGVDLTNVTLVGMVYEK-TERNTDVNFVLDDGTGRIKCRRWVNETFDSKEMEEVSNDMY 120
Query: 416 VRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNFESQLGQQVGDATQSH 595
VR+ G+LK+FQG +QL FSVRP+ +F+E+ FH+I+CIH + G +
Sbjct: 121 VRVYGNLKSFQGVKQLGAFSVRPVTNFDEIPFHFIDCIHSHLLAKVKLEGTPSTYPPTNS 180
Query: 596 TVNANQATTLNPVMPSQNS-----DGNGRKNLDDMILDYLKQPACTARQQGIHLDEIAQQ 760
++N + LN N +G ++ D +++DYL+Q + ++GIH++E+A++
Sbjct: 181 SINTPVKSALNGSQAPSNPGYTQYSTDGLEDCDKLVIDYLQQHSSMLDERGIHVEELARE 240
Query: 761 LKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 853
LK+P +++ +++LE DGL+YSTID+ H+K
Sbjct: 241 LKLPLDRIRLSVKALEDDGLVYSTIDDSHYK 271
>gi|224121196|ref|XP_002330767.1| predicted protein [Populus trichocarpa]
Length = 282
Score = 242 bits (617), Expect = 7e-062
Identities = 123/244 (50%), Positives = 177/244 (72%), Gaps = 11/244 (4%)
Frame = +2
Query: 140 SSSSSTTKGIVPVTVKQINESSHSGGEKSGIVINGIELTNVSLVGLVCDKDVSKVTEVKF 319
S SS + G+VPVTVKQI+++S SG EKS VING+++TNV++VG+V +K K T+V F
Sbjct: 42 SLSSRNSLGVVPVTVKQISQASQSGDEKSSFVINGVDVTNVTVVGMVFNK-AEKSTDVSF 100
Query: 320 TLDDGTGRIDCKRWVNESFDAREMESVQDGTYVRLNGHLKTFQGNQQLLVFSVRPIVDFN 499
+DDGTGRI C+RWV E+FD EME+VQDG YVR+ GHL+ FQ +QL+ FSVRP+ +F+
Sbjct: 101 VIDDGTGRIGCRRWVTENFDKLEMEAVQDGMYVRVIGHLRVFQDVKQLVAFSVRPVTNFD 160
Query: 500 EVTFHYIECIHFYSKNFESQLGQQVGDATQSHTVNANQAT------TLNPVMPSQNSDGN 661
E+TFH+I+CIH + +N S+L Q G +TQ H V ++ T T + S+ D +
Sbjct: 161 EITFHFIDCIHSHLQN--SKL--QGGASTQLHMVESSMNTPVRNGQTFTSNLMSKQFDVD 216
Query: 662 GRKNLDDMILDYLKQPACTARQQGIHLDEIAQQLKVPKNKLEGVIQSLEGDGLIYSTIDE 841
G K+ D ++LD L+Q + +++G+H+DE+ QQLK+P K++ I+SLE +GLIYSTIDE
Sbjct: 217 GLKDCDQLVLDRLQQSSSIGQEKGMHMDELCQQLKLPMEKIKESIRSLEDEGLIYSTIDE 276
Query: 842 YHFK 853
+H+K
Sbjct: 277 FHYK 280
>gi|255574103|ref|XP_002527967.1| Replication protein A 30 kDa subunit, putative
[Ricinus communis]
Length = 242
Score = 213 bits (541), Expect = 5e-053
Identities = 105/175 (60%), Positives = 143/175 (81%), Gaps = 7/175 (4%)
Frame = +2
Query: 56 FSNSQFEPNSAFSGGGFMSSQPTQPYESSSS---SSTTKGIVPVTVKQINESSHSGGEKS 226
FS+SQFE +FSGGGFMSSQ +QP +S+ S S ++G+VPVTVKQI+++SHSG E S
Sbjct: 2 FSSSQFE---SFSGGGFMSSQSSQPTDSAPSPAKSRDSQGLVPVTVKQISQASHSGDENS 58
Query: 227 GIVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQD 406
VI+G+++TNV++VG+V DK KVT+V FT+DDGTGRI CKRWVNE+FD+ EME++QD
Sbjct: 59 NYVIDGVDVTNVTVVGMVFDK-AQKVTDVNFTVDDGTGRIGCKRWVNENFDSSEMETIQD 117
Query: 407 GTYVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNFESQLGQQ 571
G YVR++GHL++FQG +QL FSVRP+++F+EVTFH+I+CIH + N +SQ +Q
Sbjct: 118 GMYVRVSGHLRSFQGVRQLGAFSVRPVMNFDEVTFHFIDCIHTHLLNSKSQFTKQ 172
>gi|294460336|gb|ADE75749.1| unknown [Picea sitchensis]
Length = 281
Score = 200 bits (508), Expect = 3e-049
Identities = 118/278 (42%), Positives = 173/278 (62%), Gaps = 21/278 (7%)
Frame = +2
Query: 65 SQFEPNSAFSGGGFMSSQPTQPYESSSS----SSTTKGIVPVTVKQINESSHS-GGEKSG 229
SQ + S FSGGGFM SQ TQ E S S T G++P+TVKQI++++ E S
Sbjct: 6 SQSDGGSLFSGGGFMPSQATQVNEGGFSSVRKSGTATGLLPLTVKQISQATQKPSDENSN 65
Query: 230 IVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDG 409
I+G+++ NV+LVG+V +K+ +VT+V F LDDGTGR++ KRWVN++ ++ EM VQ+G
Sbjct: 66 FTIDGVDVNNVTLVGMVFNKE-ERVTDVSFYLDDGTGRMEVKRWVNDAMESAEMADVQNG 124
Query: 410 TYVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNFESQLGQQVGDATQ 589
+YVR++GHL++FQ + + FSVRP+ DFNEVTFH +ECI + N + Q G ATQ
Sbjct: 125 SYVRVHGHLRSFQNKKLVNAFSVRPVTDFNEVTFHSLECIFVHLYNMKVQ-----GGATQ 179
Query: 590 SHTVN--ANQATTLNPVMPSQN---SDG----NGRKNLDDMILDYLKQPACTARQQGIHL 742
++ + A T PS N S G G K+L+ M+ ++PA A + G+H+
Sbjct: 180 PNSASPVAKGPPTPFSNTPSHNQFMSPGPVSVGGAKDLNRMVQSIFEEPANLAIEHGVHV 239
Query: 743 DEIAQQLK-VPKNKLEGVIQSLEGDGLIYSTIDEYHFK 853
D++ ++L K ++ I L +G IYSTIDE H+K
Sbjct: 240 DDVVRRLHGFTKKQIMESIAFLINEGYIYSTIDEDHYK 277
>gi|297832926|ref|XP_002884345.1| hypothetical protein ARALYDRAFT_477538
[Arabidopsis lyrata subsp. lyrata]
Length = 278
Score = 193 bits (490), Expect = 4e-047
Identities = 103/273 (37%), Positives = 167/273 (61%), Gaps = 15/273 (5%)
Frame = +2
Query: 68 QFEPNSAFSGGGFMSSQ-PTQPYESSSS--SSTTKGIVPVTVKQINESSHSGGEKSGIVI 238
+F+ N+AF+GGGFM SQ TQ ++SSSS + + ++P+T+KQ++ +S +G +S I
Sbjct: 5 EFDGNAAFAGGGFMPSQATTQAHDSSSSLKNRDVRTLLPLTLKQLSSASTTG--ESNFSI 62
Query: 239 NGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTYV 418
+G+++ V++VG + + +++T+V+F +DDGTG +DC RW E + EME+V+ G YV
Sbjct: 63 DGVDINTVAIVGRISRME-NRITQVEFVVDDGTGWVDCVRWCQERQETEEMEAVKLGMYV 121
Query: 419 RLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNFESQLGQQVGDATQSHT 598
RL+GHLK FQG + + VFS+RP+ DFNE+ H+ EC++ + N + + G + AT +
Sbjct: 122 RLHGHLKIFQGKRSVNVFSIRPVTDFNEIVHHFTECMYVHMYNTKLR-GGSITQATTTPR 180
Query: 599 VNANQATTLNPVMPSQNSDGNGRKN--------LDDMILDYLKQPACTARQQGIHLDEIA 754
+T P P Q N N + +L+YL QP + G+H D IA
Sbjct: 181 PQMPYSTMPTPAKPYQTGPSNQFPNQFNDPMHGVKQTVLNYLNQPMHLVSEAGVHCDIIA 240
Query: 755 QQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 853
+ L++P +++ ++ L DG IYST+DE FK
Sbjct: 241 RDLRIPLPQVKDALEQLSNDGCIYSTMDETCFK 273
>gi|330318724|gb|AEC11022.1| replication protein a 30 kda subunit [Camellia
sinensis]
Length = 222
Score = 191 bits (483), Expect = 2e-046
Identities = 90/172 (52%), Positives = 130/172 (75%), Gaps = 4/172 (2%)
Frame = +2
Query: 110 SSQPTQPYESSSSSSTTK---GIVPVTVKQINESSHSGGEKSGIVINGIELTNVSLVGLV 280
SSQ TQ + SS + ++ G+VP+TVKQI+ES+HSG EKS V++G+++ NV+L+G+V
Sbjct: 13 SSQSTQATDIGSSPAKSRNAYGVVPITVKQISESAHSGDEKSNYVVDGVDVVNVTLIGMV 72
Query: 281 CDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTYVRLNGHLKTFQGNQQ 460
K +VT+V FTLDDGTGRIDC RWVNE+FD++EME++QDG YVR+NG +K+ QG +Q
Sbjct: 73 -SKKTERVTDVAFTLDDGTGRIDCNRWVNEAFDSKEMENIQDGIYVRVNGLIKSLQGRRQ 131
Query: 461 LLVFSVRPIVDFNEVTFHYIECIHFYSKNFESQLGQQVGDATQSHTVNANQA 616
L+ FSVRP+ +F+E++FH+IECIHF+ +N +++L QS T + A
Sbjct: 132 LIAFSVRPVTNFDEISFHFIECIHFHLQNSKTKLQGNTTTQPQSATPSVKTA 183
>gi|18396383|ref|NP_566188.1| replication factor A2 [Arabidopsis thaliana]
Length = 278
Score = 188 bits (476), Expect = 2e-045
Identities = 103/272 (37%), Positives = 164/272 (60%), Gaps = 15/272 (5%)
Frame = +2
Query: 71 FEPNSAFSGGGFMSSQ-PTQPYESSSS--SSTTKGIVPVTVKQINESSHSGGEKSGIVIN 241
F+ N+AF+GGGFM SQ TQ +ESSSS + + ++P+T+KQ++ +S +G +S I+
Sbjct: 6 FDGNAAFAGGGFMPSQATTQAHESSSSLKNRDVRTLLPLTLKQLSSASTTG--ESNFSID 63
Query: 242 GIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTYVR 421
G+++ V +VG + + +++T+V F +DDGTG +DC RW + + EME+V+ G YVR
Sbjct: 64 GVDIKTVVIVGRISRME-NRITQVDFVVDDGTGWVDCVRWCHARQETEEMEAVKLGMYVR 122
Query: 422 LNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNFESQLGQQVGDATQSHTV 601
L+GHLK FQG + + VFSVRP+ DFNE+ H+ EC++ + N + + G + T +
Sbjct: 123 LHGHLKIFQGKRSVNVFSVRPVTDFNEIVHHFTECMYVHMYNTKLR-GGSITQDTATPRP 181
Query: 602 NANQATTLNPVMPSQNSDGNGRKN--------LDDMILDYLKQPACTARQQGIHLDEIAQ 757
+T P P Q N N + +L+YL QP + G+H D IA+
Sbjct: 182 QMPYSTMPTPAKPYQTGPSNQFPNQFNDSMHGVKQTVLNYLNQPMHIVSEAGVHCDIIAR 241
Query: 758 QLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 853
+L++P +++ ++ L DG IYST+DE FK
Sbjct: 242 ELRIPLLQVKEALEQLSNDGCIYSTLDETCFK 273
>gi|115450003|ref|NP_001048604.1| Os02g0829100 [Oryza sativa Japonica Group]
Length = 279
Score = 180 bits (455), Expect = 4e-043
Identities = 106/276 (38%), Positives = 161/276 (58%), Gaps = 20/276 (7%)
Frame = +2
Query: 71 FEPNSAFSGGGFMSSQ-----PTQPYESSSSSSTTKGIVPVTVKQINESSHSG--GEKSG 229
F AFS F SSQ T P +S +SST +P+TVKQI+E+ SG GEK
Sbjct: 4 FSQPDAFSPSQFTSSQNAAADSTTPSKSRGASST----MPLTVKQISEAQQSGITGEKGA 59
Query: 230 -IVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQD 406
V++G+E NV LVGLV K + T+V FT+DDGTGR+D RWVN+ D+ E +VQ+
Sbjct: 60 PFVVDGVETANVRLVGLVSGK-TERNTDVSFTIDDGTGRLDFIRWVNDGADSAETAAVQN 118
Query: 407 GTYVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNFESQLGQQVGDAT 586
G YV + G LK Q ++ F++RP+ D+NEVT H+I+C+ + +N +SQ+G +
Sbjct: 119 GMYVSVIGSLKGLQERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQIGSPAKTYS 178
Query: 587 QSHTVNAN---QATTLNPV----MPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLD 745
+ ++N + TT V P + + +L+ +L+ ++PA + G+H+D
Sbjct: 179 AMGSSSSNGFSEMTTPTSVKSNPAPVLSVTNGSKTDLNTEVLNVFREPANVESEHGVHID 238
Query: 746 EIAQQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 853
EI ++ ++P+ K++ I L G IYSTIDE H+K
Sbjct: 239 EIVKRFRLPEAKIKVAIDYLADIGHIYSTIDESHYK 274
>gi|218191867|gb|EEC74294.1| hypothetical protein OsI_09546 [Oryza sativa Indica
Group]
Length = 279
Score = 179 bits (454), Expect = 6e-043
Identities = 106/277 (38%), Positives = 162/277 (58%), Gaps = 22/277 (7%)
Frame = +2
Query: 71 FEPNSAFSGGGFMSSQ-----PTQPYESSSSSSTTKGIVPVTVKQINESSHSG--GEKSG 229
F AFS F SSQ T P +S +SST +P+TVKQI+E+ SG GEK
Sbjct: 4 FSQPDAFSPSQFTSSQNAAADSTTPSKSRGASST----MPLTVKQISEAQQSGTTGEKGA 59
Query: 230 -IVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQD 406
V++G+E NV LVGLV K + T+V FT+DDGTGR+D RWVN+ D+ E +VQ+
Sbjct: 60 PFVVDGVETANVRLVGLVSGK-TERNTDVSFTIDDGTGRLDFIRWVNDGADSAETAAVQN 118
Query: 407 GTYVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNFESQLG------Q 568
G YV + G LK Q ++ F++RP+ D+NEVT H+I+C+ + +N +SQ+G
Sbjct: 119 GMYVSVIGSLKGLQERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQIGGPAKTYS 178
Query: 569 QVGDATQSHTVNANQATTL--NPVMPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHL 742
+G ++ + T++ NP P + + +L+ +L+ ++PA + G+H+
Sbjct: 179 AMGSSSSNGFSEMTTPTSVKSNPA-PVLSVTNGSKTDLNTEVLNVFREPANVESEHGVHI 237
Query: 743 DEIAQQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 853
DEI ++ ++P+ K++ I L G IYSTIDE H+K
Sbjct: 238 DEIVKRFRLPEAKIKVAIDYLADIGHIYSTIDESHYK 274
>gi|195619742|gb|ACG31701.1| replication protein A 32 kDa subunit [Zea mays]
Length = 273
Score = 175 bits (442), Expect = 1e-041
Identities = 97/273 (35%), Positives = 159/273 (58%), Gaps = 14/273 (5%)
Frame = +2
Query: 59 SNSQFEPNSAFSGGGFMSSQPTQPYESSSSSSTTKGIVPVTVKQINESSHSG-GEKSG-I 232
S + F P S F+ ++ T P + +SST +P+TVKQ+ ++ SG GEK
Sbjct: 5 SQTDFSP-SQFTSSQNAAADSTTPSKMRGASST----MPLTVKQVVDAQQSGTGEKGAPF 59
Query: 233 VINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGT 412
++NG+E+ N+ LVG+V K V + T+V FTLDDGTGR+D RWVN++ D+ E ++Q+G
Sbjct: 60 IVNGVEMANIRLVGMVNAK-VERTTDVTFTLDDGTGRLDFIRWVNDASDSFETAAIQNGM 118
Query: 413 YVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNFESQLGQQVGDATQ- 589
Y+ + G LK Q ++ FS+RPI DFNEVT H+I+C+ + +N E + G ++
Sbjct: 119 YIAVIGSLKGLQERKRATAFSIRPITDFNEVTLHFIQCVRMHIENIELKAGSPARISSSM 178
Query: 590 ----SHTVNANQATTLNPVMPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLDEIAQ 757
S+ + + T P+ + G+ +L +L++ +PA + G+H+DE+ +
Sbjct: 179 GVSFSNGFSESSTPTSLKSSPAPVTSGSSDTDLHTQVLNFFNEPANLESEHGVHVDEVLK 238
Query: 758 QLK-VPKNKLEGVIQSLEGDGLIYSTIDEYHFK 853
+ K +PK ++ I G +YSTIDE+H+K
Sbjct: 239 RFKLLPKKQITDAIDYNMDSGRLYSTIDEFHYK 271
>gi|194693140|gb|ACF80654.1| unknown [Zea mays]
Length = 273
Score = 174 bits (439), Expect = 3e-041
Identities = 97/274 (35%), Positives = 162/274 (59%), Gaps = 16/274 (5%)
Frame = +2
Query: 59 SNSQFEPNSAFSGGGFMSSQPTQPYESSSSSSTTKGIVPVTVKQINESSHSG-GEKSG-I 232
S + F P S F+ ++ T P + +SST +P+TVKQ+ ++ SG GEK
Sbjct: 5 SQTDFSP-SQFTSSQNAAADSTTPSKMRGASST----MPLTVKQVVDAQQSGTGEKGAPF 59
Query: 233 VINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGT 412
++NG+E+ N+ LVG+V K V + T+V FTLDDGTGR+D RWVN++ D+ E ++Q+G
Sbjct: 60 IVNGVEMANIRLVGMVNAK-VERTTDVTFTLDDGTGRLDFIRWVNDASDSFETAAIQNGM 118
Query: 413 YVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNFE------SQLGQQV 574
Y+ + G LK Q ++ FS+RPI DFNEVT H+I+C+ + +N E +++ +
Sbjct: 119 YIAVIGSLKGLQERKRATAFSIRPITDFNEVTLHFIQCVRMHIENTELKAGSPARINSSM 178
Query: 575 GDATQSHTVNANQATTLNPVMPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLDEIA 754
G + + ++ T+L P+ + G+ +L +L++ +PA + G+H+DE+
Sbjct: 179 GVSFSNGFSESSTPTSLKS-SPAPVTSGSSDTDLHTQVLNFFNEPANLESEHGVHVDEVL 237
Query: 755 QQLK-VPKNKLEGVIQSLEGDGLIYSTIDEYHFK 853
++ K +PK ++ I G +YSTIDE+H+K
Sbjct: 238 KRFKLLPKKQITDAIDYNMDSGRLYSTIDEFHYK 271
>gi|326520341|dbj|BAK07429.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 277
Score = 173 bits (438), Expect = 4e-041
Identities = 97/266 (36%), Positives = 154/266 (57%), Gaps = 12/266 (4%)
Frame = +2
Query: 86 AFSGGGFMSSQPTQPYESSSSSSTTKGIVPVTVKQINESSHSG-GEKSG-IVINGIELTN 259
AFS F +SQ + + G +P+TVKQI ++ +G GEK G V++G+E N
Sbjct: 9 AFSPSQFTASQNAAADSTPNKFRGASGTMPLTVKQIADAQLAGTGEKGGPFVVDGVETAN 68
Query: 260 VSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTYVRLNGHLK 439
V LVG+V K V + T+V FTLDDGTGRID RWVN++ D+ E ++Q+G YV + G LK
Sbjct: 69 VRLVGMVSGK-VERNTDVSFTLDDGTGRIDFIRWVNDAADSAETAAIQNGMYVAVIGSLK 127
Query: 440 TFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNFESQLGQQVGDATQSHTVNANQ-- 613
Q ++ F+VRPI D+NEVT H+I+C+ +++N +S++G + T +N+
Sbjct: 128 GVQDKKRATAFAVRPITDYNEVTLHFIQCVRMHAENTKSKVGSPTHTNSSMGTPFSNRLN 187
Query: 614 ------ATTLNPVMPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLDEIAQQLKVPK 775
+ NP P+ + + +L+ ++PA G+H+D+IA++ ++P
Sbjct: 188 EAATPPSVKSNPA-PAASGTNGSETDFYTQVLNVFREPANMESDHGVHMDDIAKRFRLPA 246
Query: 776 NKLEGVIQSLEGDGLIYSTIDEYHFK 853
K++ I G IYSTID++H+K
Sbjct: 247 LKIKEAIDYHVDVGHIYSTIDDFHYK 272
>gi|242067082|ref|XP_002454830.1| hypothetical protein SORBIDRAFT_04g038190
[Sorghum bicolor]
Length = 278
Score = 172 bits (434), Expect = 1e-040
Identities = 102/276 (36%), Positives = 160/276 (57%), Gaps = 18/276 (6%)
Frame = +2
Query: 59 SNSQFEPNSAFSGGGFMSSQPTQPYESSSSSSTTKGIVPVTVKQINESSHSG-GEKSG-I 232
S F P S F+ ++ T P + +SST +P+TVKQ+ ++ SG GEK
Sbjct: 5 SQPDFSP-SQFTASQNAAADSTTPSKMRGASST----MPLTVKQVVDAQQSGTGEKGAPF 59
Query: 233 VINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGT 412
V++G+E+ N+ LVG+V K V + T+V FTLDDGTGR+D RWVN++ D+ E +VQ+G
Sbjct: 60 VVDGVEMANIRLVGMVNGK-VERTTDVTFTLDDGTGRLDFIRWVNDASDSSETAAVQNGM 118
Query: 413 YVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNFESQLG------QQV 574
YV + G LK Q ++ FS+RPI DFNEVT H+I+C+ + +N + + G +
Sbjct: 119 YVAVIGSLKGLQERKRATAFSIRPITDFNEVTLHFIQCVRMHIENTKLKAGSPARTSSSM 178
Query: 575 GDATQSHTVNANQATTL--NPVMPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLDE 748
G + + ++ T+L NP P +L+ +L + +PA + G+H+DE
Sbjct: 179 GVSVSNGFSESSTPTSLKSNPA-PLTGGGSGSDTDLNKQVLHFFSEPANLESEHGVHVDE 237
Query: 749 IAQQLK-VPKNKLEGVIQSLEGDGLIYSTIDEYHFK 853
+ +Q K +PK+K++ I G +YSTID++HFK
Sbjct: 238 VYKQFKQLPKDKIKEAIAFHVDAGHLYSTIDDFHFK 273
>gi|334185046|ref|NP_001189796.1| replication factor A2 [Arabidopsis thaliana]
Length = 298
Score = 164 bits (415), Expect = 2e-038
Identities = 87/248 (35%), Positives = 145/248 (58%), Gaps = 12/248 (4%)
Frame = +2
Query: 134 ESSSSSSTTKGIVPVTVKQINESSHSGGEKSGIVINGIELTNVSLVGLVCDKDVSKVTEV 313
+SS + + ++P+T+KQ++ +S +G +S I+G+++ V +VG + + +++T+V
Sbjct: 50 KSSIRNRDVRTLLPLTLKQLSSASTTG--ESNFSIDGVDIKTVVIVGRISRME-NRITQV 106
Query: 314 KFTLDDGTGRIDCKRWVNESFDAREMESVQDGTYVRLNGHLKTFQGNQQLLVFSVRPIVD 493
F +DDGTG +DC RW + + EME+V+ G YVRL+GHLK FQG + + VFSVRP+ D
Sbjct: 107 DFVVDDGTGWVDCVRWCHARQETEEMEAVKLGMYVRLHGHLKIFQGKRSVNVFSVRPVTD 166
Query: 494 FNEVTFHYIECIHFYSKNFESQLGQQVGDATQSHTVNANQATTLNPVMPSQNSDGNGRKN 673
FNE+ H+ EC++ + N + + G + T + +T P P Q N N
Sbjct: 167 FNEIVHHFTECMYVHMYNTKLR-GGSITQDTATPRPQMPYSTMPTPAKPYQTGPSNQFPN 225
Query: 674 --------LDDMILDYLKQPACTARQQGIHLDEIAQQLKVPKNKLEGVIQSLEGDGLIYS 829
+ +L+YL QP + G+H D IA++L++P +++ ++ L DG IYS
Sbjct: 226 QFNDSMHGVKQTVLNYLNQPMHIVSEAGVHCDIIARELRIPLLQVKEALEQLSNDGCIYS 285
Query: 830 TIDEYHFK 853
T+DE FK
Sbjct: 286 TLDETCFK 293
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,486,047,059,872
Number of Sequences: 15229318
Number of Extensions: 4486047059872
Number of Successful Extensions: 1052332685
Number of sequences better than 0.0: 0
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