BLASTX 7.6.2
Query= UN39936 /QuerySize=824
(823 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G02475.1 | Symbols: | FUNCTIONS IN: molecular... 339 1e-093
TAIR9_protein||AT4G01883.1 | Symbols: | LOCATED IN: chloroplast... 232 2e-061
TAIR9_protein||AT1G02470.1 | Symbols: | FUNCTIONS IN: molecular... 224 6e-059
TAIR9_protein||AT1G02470.2 | Symbols: | FUNCTIONS IN: molecular... 220 1e-057
>TAIR9_protein||AT1G02475.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Streptomyces
cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT4G01883.1); Has 350 Blast
hits to 350 proteins in 105 species: Archae - 0; Bacteria - 211;
Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes -
110 (source: NCBI BLink). | chr1:514110-515331 REVERSE
Length = 220
Score = 339 bits (869), Expect = 1e-093
Identities = 175/221 (79%), Positives = 189/221 (85%), Gaps = 9/221 (4%)
Frame = +1
Query: 76 MNTINHLSSTTCKTSNLICSNHRLAPQPFHRKPKSFPQLLPLNGSSSSSSRSPSSSVTRR 255
MNTINHLS TCKT N+ +P F RKP S+ L+PL + + S SSSV+RR
Sbjct: 8 MNTINHLSK-TCKTPNI------QSPICFDRKPFSY-SLIPLFPKTLNGFSSYSSSVSRR 59
Query: 256 SRF-NTRNKPFSVSMEWQDCTVKMEVDIPVSVAYNFYLDRESFPKWMPFISSVEVLKDKP 432
SRF + + FSVSMEWQDC+VKMEVD+PVSVAYNFYLDRESFPKWMPFISSV+VLKDKP
Sbjct: 60 SRFIIPKRRRFSVSMEWQDCSVKMEVDVPVSVAYNFYLDRESFPKWMPFISSVQVLKDKP 119
Query: 433 DLSRWSLKYNAFGQDIKYSWLARNLQPTPNQKIHWRSLEGLPNKGSVRFFPKGPSSCLVE 612
DLSRWSLKYNAFGQDIKYSWLARNLQPTPNQKIHWRSLEGLPNKGSVRFFPKGPSSC+VE
Sbjct: 120 DLSRWSLKYNAFGQDIKYSWLARNLQPTPNQKIHWRSLEGLPNKGSVRFFPKGPSSCIVE 179
Query: 613 LTVSYEVPALLTPVASALRPFLESLLRGGLERFATLAKTT* 735
LTVSYEVPALLTPVAS LRPF+ESLLRGGLERFA LAKTT*
Sbjct: 180 LTVSYEVPALLTPVASVLRPFIESLLRGGLERFAALAKTT* 220
>TAIR9_protein||AT4G01883.1 | Symbols: | LOCATED IN: chloroplast; CONTAINS
InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G02475.1); Has 320 Blast hits to 320 proteins in 96 species:
Archae - 0; Bacteria - 186; Metazoa - 0; Fungi - 0; Plants - 29;
Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). |
chr4:813162-814800 FORWARD
Length = 225
Score = 232 bits (591), Expect = 2e-061
Identities = 112/179 (62%), Positives = 141/179 (78%), Gaps = 1/179 (0%)
Frame = +1
Query: 196 PLNGSSSSSSRSPSSSVTRRSRFNTRNKPFSVSMEWQDCTVKMEVDIPVSVAYNFYLDRE 375
P+ + +S SP S T RS ++ + F MEWQ+C VKM+V++PVSVAY Y +RE
Sbjct: 44 PMKPLTLASRFSPLIS-TNRSFKSSVFRRFDTLMEWQECKVKMKVEVPVSVAYGLYSERE 102
Query: 376 SFPKWMPFISSVEVLKDKPDLSRWSLKYNAFGQDIKYSWLARNLQPTPNQKIHWRSLEGL 555
S PKWM FISSV+VLKDKPDLSRW+LKY AFGQ+++Y+WLA+NLQP PNQKIHW SLEGL
Sbjct: 103 SIPKWMTFISSVKVLKDKPDLSRWTLKYKAFGQNLEYAWLAKNLQPLPNQKIHWISLEGL 162
Query: 556 PNKGSVRFFPKGPSSCLVELTVSYEVPALLTPVASALRPFLESLLRGGLERFATLAKTT 732
PNKG+VRFFP GPSSC VELT +YEVP LL P A+AL+P ++ L++ LE+FA +AK+T
Sbjct: 163 PNKGTVRFFPLGPSSCDVELTFAYEVPLLLIPFAAALQPLMQGLIKNSLEQFAEIAKST 221
>TAIR9_protein||AT1G02470.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4
anthesis, C globular stage, petal differentiation and expansion stage;
CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase
(InterPro:IPR005031); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G02475.1); Has 276 Blast hits to 276 proteins
in 86 species: Archae - 0; Bacteria - 162; Metazoa - 0; Fungi - 0;
Plants - 29; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). |
chr1:511916-513573 REVERSE
Length = 221
Score = 224 bits (570), Expect = 6e-059
Identities = 108/189 (57%), Positives = 138/189 (73%), Gaps = 1/189 (0%)
Frame = +1
Query: 163 HRKPKSFPQLLPLNGSSSSSSRSPSSSVTRRSRFNTRNKPFSVSMEWQDCTVKMEVDIPV 342
HR S P++L L SSS++S +S ++ KPF M+WQD TVKM VD P
Sbjct: 32 HRSSSSSPRMLLLLSSSSANSAKLLNS-NNGLLISSSPKPFRPVMQWQDVTVKMVVDAPA 90
Query: 343 SVAYNFYLDRESFPKWMPFISSVEVLKDKPDLSRWSLKYNAFGQDIKYSWLARNLQPTPN 522
SVAY Y DRE FPKWMPF+SSVE ++ PDLSR+ +K +FGQ+I+Y +LA+NLQP P+
Sbjct: 91 SVAYKLYADREMFPKWMPFLSSVEAMEGSPDLSRYLVKLESFGQNIEYHFLAKNLQPIPD 150
Query: 523 QKIHWRSLEGLPNKGSVRFFPKGPSSCLVELTVSYEVPALLTPVASALRPFLESLLRGGL 702
+KIHWRS+EG N+GSVRFFP+GPSSCLVE++ SYEVP PVA A++PF+E ++RGGL
Sbjct: 151 RKIHWRSIEGFENRGSVRFFPRGPSSCLVEISFSYEVPNAFAPVAFAMKPFMEKIIRGGL 210
Query: 703 ERFATLAKT 729
ERFA KT
Sbjct: 211 ERFAAFVKT 219
>TAIR9_protein||AT1G02470.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4
anthesis, C globular stage, petal differentiation and expansion stage;
CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase
(InterPro:IPR005031); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G02475.1); Has 273 Blast hits to 273 proteins
in 85 species: Archae - 0; Bacteria - 160; Metazoa - 0; Fungi - 0;
Plants - 29; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). |
chr1:511916-513573 REVERSE
Length = 222
Score = 220 bits (558), Expect = 1e-057
Identities = 108/190 (56%), Positives = 138/190 (72%), Gaps = 2/190 (1%)
Frame = +1
Query: 163 HRKPKSFPQLLPLNGSSSSSSRSPSSSVTRRSRFNTRNKPFSVSMEWQDCT-VKMEVDIP 339
HR S P++L L SSS++S +S ++ KPF M+WQD T VKM VD P
Sbjct: 32 HRSSSSSPRMLLLLSSSSANSAKLLNS-NNGLLISSSPKPFRPVMQWQDVTRVKMVVDAP 90
Query: 340 VSVAYNFYLDRESFPKWMPFISSVEVLKDKPDLSRWSLKYNAFGQDIKYSWLARNLQPTP 519
SVAY Y DRE FPKWMPF+SSVE ++ PDLSR+ +K +FGQ+I+Y +LA+NLQP P
Sbjct: 91 ASVAYKLYADREMFPKWMPFLSSVEAMEGSPDLSRYLVKLESFGQNIEYHFLAKNLQPIP 150
Query: 520 NQKIHWRSLEGLPNKGSVRFFPKGPSSCLVELTVSYEVPALLTPVASALRPFLESLLRGG 699
++KIHWRS+EG N+GSVRFFP+GPSSCLVE++ SYEVP PVA A++PF+E ++RGG
Sbjct: 151 DRKIHWRSIEGFENRGSVRFFPRGPSSCLVEISFSYEVPNAFAPVAFAMKPFMEKIIRGG 210
Query: 700 LERFATLAKT 729
LERFA KT
Sbjct: 211 LERFAAFVKT 220
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,928,674,532
Number of Sequences: 33410
Number of Extensions: 19928674532
Number of Successful Extensions: 642080210
Number of sequences better than 0.0: 0
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