BLASTX 7.6.2
Query= UN39950 /QuerySize=879
(878 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G21190.1 | Symbols: emb1417 | emb1417 (embryo ... 354 5e-098
TAIR9_protein||AT4G18975.1 | Symbols: | pentatricopeptide (PPR)... 131 7e-031
TAIR9_protein||AT4G18975.2 | Symbols: | pentatricopeptide (PPR)... 131 7e-031
TAIR9_protein||AT4G18975.3 | Symbols: | pentatricopeptide (PPR)... 131 7e-031
TAIR9_protein||AT1G04590.1 | Symbols: | FUNCTIONS IN: molecular... 101 8e-022
TAIR9_protein||AT1G04590.2 | Symbols: | FUNCTIONS IN: molecular... 95 6e-020
>TAIR9_protein||AT4G21190.1 | Symbols: emb1417 | emb1417 (embryo defective 1417)
| chr4:11292493-11293763 REVERSE
Length = 308
Score = 354 bits (907), Expect = 5e-098
Identities = 179/215 (83%), Positives = 192/215 (89%), Gaps = 7/215 (3%)
Frame = -2
Query: 721 RRALAILEDEREWKKIIQVTKWMLSKGQGRTMGTYFSLLNALTEDNRLDEAEELWNKLFM 542
++AL ILEDE+EWKKIIQVTKWMLSKGQGRTMGTYFSLLNAL EDNRLDEAEELWNKLFM
Sbjct: 95 KKALVILEDEKEWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFM 154
Query: 541 EHLEGTPRKFFNKMISIYYKRDMHHKLFEVFADMEELGVKPNIAIVDMVGKVFLKLGMND 362
EHLEGTPRKFFNKMISIYYKRDMH KLFEVFADMEELGVKPN+AIV MVGKVF+KL M D
Sbjct: 155 EHLEGTPRKFFNKMISIYYKRDMHQKLFEVFADMEELGVKPNVAIVSMVGKVFVKLEMKD 214
Query: 361 KYEKLMKKYPPPQWEFRYIKGRRVKVKAKQLNELSEGERDLSSDEDKIESKSNMLSVEEA 182
KYEKLMKKYPPPQWEFRYIKGRRVKVKAKQLNELSEGE LSSDEDKI+++ +E
Sbjct: 215 KYEKLMKKYPPPQWEFRYIKGRRVKVKAKQLNELSEGEGGLSSDEDKIDNE-----IESE 269
Query: 181 NQDGDDYSEEEEEE-EGLGANQRQIGTSREPRLDH 80
+DG+D SEEEE+E E LG +Q QI TSREP LDH
Sbjct: 270 EEDGEDLSEEEEDEKELLGGSQGQI-TSREPSLDH 303
Score = 106 bits (262), Expect = 3e-023
Identities = 51/55 (92%), Positives = 54/55 (98%)
Frame = -1
Query: 878 PRVWKTRKRIGSISKSAKMIACIKELSNVKEEVYGALDSFIAWELEFPLVIVKKS 714
PRVWKTRKRIG+ISK+AKMIACIK LSNVKEEVYGALDSFIAWELEFPLVIVKK+
Sbjct: 43 PRVWKTRKRIGTISKAAKMIACIKGLSNVKEEVYGALDSFIAWELEFPLVIVKKA 97
>TAIR9_protein||AT4G18975.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:10392170-10393665 REVERSE
Length = 288
Score = 131 bits (328), Expect = 7e-031
Identities = 64/146 (43%), Positives = 90/146 (61%), Gaps = 1/146 (0%)
Frame = -2
Query: 718 RALAILEDEREWKKIIQVTKWMLSKGQGRTMGTYFSLLNALTEDNRLDEAEELWNKLFME 539
+AL IL +W ++IQ+ KWMLSKGQG TMGTY LL A D R DEAE LWN +
Sbjct: 136 KALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLWNMILHT 195
Query: 538 HLEGTPRKFFNKMISIYYKRDMHHKLFEVFADMEELGVKPNIAIVDMVGKVFLKLGMNDK 359
H PR+ F +MI++Y D+H K+ EVFADMEEL V P+ V + F +L +
Sbjct: 196 HTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFRELNQEEN 255
Query: 358 YEKLMKKYPPPQWEFRYIKGRRVKVK 281
+ ++++Y ++++ Y G RV+VK
Sbjct: 256 RKLILRRY-LSEYKYIYFNGERVRVK 280
Score = 52 bits (122), Expect = 6e-007
Identities = 22/62 (35%), Positives = 36/62 (58%)
Frame = -1
Query: 872 VWKTRKRIGSISKSAKMIACIKELSNVKEEVYGALDSFIAWELEFPLVIVKKSFSYS*RR 693
+WK GS K+ ++ + L N KE VYGAL+ ++AWE+EFP++ K+ +R
Sbjct: 85 LWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAAAKALQILRKR 144
Query: 692 KR 687
+
Sbjct: 145 SQ 146
>TAIR9_protein||AT4G18975.2 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:10392170-10393503 REVERSE
Length = 261
Score = 131 bits (328), Expect = 7e-031
Identities = 64/146 (43%), Positives = 90/146 (61%), Gaps = 1/146 (0%)
Frame = -2
Query: 718 RALAILEDEREWKKIIQVTKWMLSKGQGRTMGTYFSLLNALTEDNRLDEAEELWNKLFME 539
+AL IL +W ++IQ+ KWMLSKGQG TMGTY LL A D R DEAE LWN +
Sbjct: 109 KALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLWNMILHT 168
Query: 538 HLEGTPRKFFNKMISIYYKRDMHHKLFEVFADMEELGVKPNIAIVDMVGKVFLKLGMNDK 359
H PR+ F +MI++Y D+H K+ EVFADMEEL V P+ V + F +L +
Sbjct: 169 HTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFRELNQEEN 228
Query: 358 YEKLMKKYPPPQWEFRYIKGRRVKVK 281
+ ++++Y ++++ Y G RV+VK
Sbjct: 229 RKLILRRY-LSEYKYIYFNGERVRVK 253
Score = 52 bits (122), Expect = 6e-007
Identities = 22/62 (35%), Positives = 36/62 (58%)
Frame = -1
Query: 872 VWKTRKRIGSISKSAKMIACIKELSNVKEEVYGALDSFIAWELEFPLVIVKKSFSYS*RR 693
+WK GS K+ ++ + L N KE VYGAL+ ++AWE+EFP++ K+ +R
Sbjct: 58 LWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAAAKALQILRKR 117
Query: 692 KR 687
+
Sbjct: 118 SQ 119
>TAIR9_protein||AT4G18975.3 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:10392170-10393665 REVERSE
Length = 288
Score = 131 bits (328), Expect = 7e-031
Identities = 64/146 (43%), Positives = 90/146 (61%), Gaps = 1/146 (0%)
Frame = -2
Query: 718 RALAILEDEREWKKIIQVTKWMLSKGQGRTMGTYFSLLNALTEDNRLDEAEELWNKLFME 539
+AL IL +W ++IQ+ KWMLSKGQG TMGTY LL A D R DEAE LWN +
Sbjct: 136 KALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESLWNMILHT 195
Query: 538 HLEGTPRKFFNKMISIYYKRDMHHKLFEVFADMEELGVKPNIAIVDMVGKVFLKLGMNDK 359
H PR+ F +MI++Y D+H K+ EVFADMEEL V P+ V + F +L +
Sbjct: 196 HTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFRELNQEEN 255
Query: 358 YEKLMKKYPPPQWEFRYIKGRRVKVK 281
+ ++++Y ++++ Y G RV+VK
Sbjct: 256 RKLILRRY-LSEYKYIYFNGERVRVK 280
Score = 52 bits (122), Expect = 6e-007
Identities = 22/62 (35%), Positives = 36/62 (58%)
Frame = -1
Query: 872 VWKTRKRIGSISKSAKMIACIKELSNVKEEVYGALDSFIAWELEFPLVIVKKSFSYS*RR 693
+WK GS K+ ++ + L N KE VYGAL+ ++AWE+EFP++ K+ +R
Sbjct: 85 LWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVEFPIIAAAKALQILRKR 144
Query: 692 KR 687
+
Sbjct: 145 SQ 146
>TAIR9_protein||AT1G04590.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth
stages; BEST Arabidopsis thaliana protein match is: emb1417 (embryo
defective 1417) (TAIR:AT4G21190.1); Has 54 Blast hits to 54 proteins in
8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
52; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
chr1:1258760-1261411 REVERSE
Length = 382
Score = 101 bits (250), Expect = 8e-022
Identities = 63/184 (34%), Positives = 99/184 (53%), Gaps = 7/184 (3%)
Frame = -2
Query: 712 LAILEDEREWKKIIQVTKWMLSKGQGRTMGTYFSLLNALTEDNRLDEAEELWNKLFMEHL 533
+A LE E +W +++QV KW+LSKGQG TMGTY L+ AL D R +EA +W K L
Sbjct: 186 IASLEKEHQWHRMVQVIKWILSKGQGNTMGTYGQLIRALDMDRRAEEAHVIWRKKVGNDL 245
Query: 532 EGTPRKFFNKMISIYYKRDMHHKLFEVFADMEELGVK-PNIAIVDMVGKVFLKLGMNDKY 356
P + +M+ IY++ +M +L ++F D+E K P+ IV V + LGM D+
Sbjct: 246 HSVPWQLCLQMMRIYFRNNMLQELVKLFKDLESYDRKPPDKHIVQTVADAYELLGMLDEK 305
Query: 355 EKLMKKYP-----PPQWEFRYIKGRRVKVKAKQLNE-LSEGERDLSSDEDKIESKSNMLS 194
E+++ KY P + R+ K ++ E +EG D + E + E K N+ +
Sbjct: 306 ERVVTKYSHLLLGTPSDDKPSRSSRKKKKPELRIPEATTEGAVDAAKAEIQEERKENLDN 365
Query: 193 VEEA 182
+E+
Sbjct: 366 HQES 369
>TAIR9_protein||AT1G04590.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth
stages; BEST Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT4G18975.3); Has 54 Blast hits
to 54 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink). | chr1:1258760-1261411 REVERSE
Length = 385
Score = 95 bits (234), Expect = 6e-020
Identities = 52/130 (40%), Positives = 76/130 (58%), Gaps = 4/130 (3%)
Frame = -2
Query: 712 LAILEDEREWKKIIQVTKWMLSKGQGRTMGTYFSLLNALTEDNRLDEAEELWNKLFMEHL 533
+A LE E +W +++QV KW+LSKGQG TMGTY L+ AL D R +EA +W K L
Sbjct: 186 IASLEKEHQWHRMVQVIKWILSKGQGNTMGTYGQLIRALDMDRRAEEAHVIWRKKVGNDL 245
Query: 532 EGTPRKFFNKMISIYYKRDMHHKLFEV---FADMEELGVK-PNIAIVDMVGKVFLKLGMN 365
P + +M+ IY++ +M +L +V F D+E K P+ IV V + LGM
Sbjct: 246 HSVPWQLCLQMMRIYFRNNMLQELVKVMKLFKDLESYDRKPPDKHIVQTVADAYELLGML 305
Query: 364 DKYEKLMKKY 335
D+ E+++ KY
Sbjct: 306 DEKERVVTKY 315
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,928,674,532
Number of Sequences: 33410
Number of Extensions: 19928674532
Number of Successful Extensions: 642080210
Number of sequences better than 0.0: 0
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