BLASTX 7.6.2
Query= UN40083 /QuerySize=1031
(1030 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G51120.1 | Symbols: PABN1, ATPABN1 | PABN1 (PO... 410 8e-115
TAIR9_protein||AT5G65260.1 | Symbols: | polyadenylate-binding p... 275 5e-074
TAIR9_protein||AT5G10350.1 | Symbols: | polyadenylate-binding p... 260 2e-069
TAIR9_protein||AT5G10350.2 | Symbols: | polyadenylate-binding p... 234 1e-061
TAIR9_protein||AT2G16940.1 | Symbols: | RNA recognition motif (... 55 5e-008
TAIR9_protein||AT2G35410.1 | Symbols: | 33 kDa ribonucleoprotei... 55 8e-008
TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA b... 53 2e-007
TAIR9_protein||AT4G14300.1 | Symbols: | heterogeneous nuclear r... 53 3e-007
TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine... 49 4e-006
>TAIR9_protein||AT5G51120.1 | Symbols: PABN1, ATPABN1 | PABN1
(POLYADENYLATE-BINDING PROTEIN 1); RNA binding / poly(A) binding /
protein binding | chr5:20779760-20781241 FORWARD
Length = 228
Score = 410 bits (1053), Expect = 8e-115
Identities = 204/231 (88%), Positives = 215/231 (93%), Gaps = 5/231 (2%)
Frame = +3
Query: 63 MTLNDEQEHEVYGGEIP-EGEGEMETDEYEEHVGEEEGAAAAGGDEELEPGSSSKDLEDM 239
M ++DEQEHEVYGGEIP E EGEM+T+EYEEH GEE AA GDEELEPGSSS+DLEDM
Sbjct: 1 MPVHDEQEHEVYGGEIPEEEEGEMDTEEYEEHGGEE---GAAAGDEELEPGSSSRDLEDM 57
Query: 240 KKRIKEIEEEAGALREMQAKAEKEMGADQDPSGAISSAEKEEVDSRSIYVGNVDYACTPE 419
KKRIKEIEEEAGALREMQAKAEK+MGA QDPSG +S+AEKEEVDSRSIYVGNVDYACTPE
Sbjct: 58 KKRIKEIEEEAGALREMQAKAEKDMGASQDPSGGVSAAEKEEVDSRSIYVGNVDYACTPE 117
Query: 420 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEEDAVQNSLILNESELHGRQIKVSAK 599
EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVE +AVQNSLILNESELHGRQIKVSAK
Sbjct: 118 EVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAK 177
Query: 600 RTNVPGMRRFRGR-RPFRPMRGFMPGIPFYAPYGYGRVPRFRRPMRYRPY* 749
RTNVPGMR+FRGR RPFRPMRGFMPG+PFY PY YGRVPRFRRPMRYRPY*
Sbjct: 178 RTNVPGMRQFRGRGRPFRPMRGFMPGVPFYPPYAYGRVPRFRRPMRYRPY* 228
>TAIR9_protein||AT5G65260.1 | Symbols: | polyadenylate-binding protein family
protein / PABP family protein | chr5:26080501-26082984 REVERSE
Length = 221
Score = 275 bits (701), Expect = 5e-074
Identities = 146/224 (65%), Positives = 172/224 (76%), Gaps = 16/224 (7%)
Frame = +3
Query: 90 EVYGGEIPEGEGEMETDEYEEHVGEEEGAAAAGGDEELEPGSSSKDLEDMKKRIKEIEEE 269
EVYGGEIP+ GEM+ D E + + AAA D + K+L++MKKR+KE+E+E
Sbjct: 7 EVYGGEIPD-VGEMDGD--MEALNPDLDMAAADDD-------AVKELDEMKKRLKEMEDE 56
Query: 270 AGALREMQAKAEKEMGADQDPSGAISSAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCG 449
A ALREMQAK EKEMGA S A + A KEEVD+RS++VGNVDYACTPEEVQQHFQ+CG
Sbjct: 57 AAALREMQAKVEKEMGAQDPASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCG 116
Query: 450 TVNRVTILTDKFGQPKGFAYVEFVEEDAVQNSLILNESELHGRQIKVSAKRTNVPGMRRF 629
TV+RVTILTDKFGQPKGFAYVEFVE +AVQ +L LNESELHGRQ+KV KRTNVPG+++F
Sbjct: 117 TVHRVTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQF 176
Query: 630 RGRRPFRPMRGFMPGIPF-----YAPYGYGRVPRFRRPMRYRPY 746
RGRR F P G+ PF Y+PYGYG+ PRFRRPMRY PY
Sbjct: 177 RGRR-FNPYMGYRFRRPFMSPYMYSPYGYGKAPRFRRPMRYMPY 219
>TAIR9_protein||AT5G10350.1 | Symbols: | polyadenylate-binding protein family
protein / PABP family protein | chr5:3255674-3257746 REVERSE
Length = 218
Score = 260 bits (662), Expect = 2e-069
Identities = 137/217 (63%), Positives = 166/217 (76%), Gaps = 12/217 (5%)
Frame = +3
Query: 129 METDEYEEHVGE-EEGAAAAGGDEELEPGSSSKD----LEDMKKRIKEIEEEAGALREMQ 293
ME +E+E + GE E D +++ ++ +D L +MK+R+KE+EEEA ALREMQ
Sbjct: 1 MEEEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQ 60
Query: 294 AKAEKEMGADQDPSGAISSAE-KEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI 470
AK EKEMGA QDP+ ++ E KEEVD+RS+YVGNVDYACTPEEVQ HFQ+CGTVNRVTI
Sbjct: 61 AKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTI 120
Query: 471 LTDKFGQPKGFAYVEFVEEDAVQNSLILNESELHGRQIKVSAKRTNVPGMRRFRGRRPFR 650
L DKFGQPKGFAYVEFVE +AVQ +L LNESELHGRQ+KVS KRTNVPGM+++ R F
Sbjct: 121 LMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPGR-FN 179
Query: 651 PMRGF---MPGIP--FYAPYGYGRVPRFRRPMRYRPY 746
P G+ P +P FY+PYGYG+ PRFRRPMRY PY
Sbjct: 180 PSMGYRFRRPFVPPYFYSPYGYGKAPRFRRPMRYMPY 216
>TAIR9_protein||AT5G10350.2 | Symbols: | polyadenylate-binding protein family
protein / PABP family protein | chr5:3255808-3257746 REVERSE
Length = 203
Score = 234 bits (595), Expect = 1e-061
Identities = 126/203 (62%), Positives = 154/203 (75%), Gaps = 12/203 (5%)
Frame = +3
Query: 129 METDEYEEHVGE-EEGAAAAGGDEELEPGSSSKD----LEDMKKRIKEIEEEAGALREMQ 293
ME +E+E + GE E D +++ ++ +D L +MK+R+KE+EEEA ALREMQ
Sbjct: 1 MEEEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQ 60
Query: 294 AKAEKEMGADQDPSGAISSAE-KEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI 470
AK EKEMGA QDP+ ++ E KEEVD+RS+YVGNVDYACTPEEVQ HFQ+CGTVNRVTI
Sbjct: 61 AKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTI 120
Query: 471 LTDKFGQPKGFAYVEFVEEDAVQNSLILNESELHGRQIKVSAKRTNVPGMRRFRGRRPFR 650
L DKFGQPKGFAYVEFVE +AVQ +L LNESELHGRQ+KVS KRTNVPGM+++ R F
Sbjct: 121 LMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPGR-FN 179
Query: 651 PMRGF---MPGIP--FYAPYGYG 704
P G+ P +P FY+PYGYG
Sbjct: 180 PSMGYRFRRPFVPPYFYSPYGYG 202
>TAIR9_protein||AT2G16940.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr2:7342869-7347052 REVERSE
Length = 562
Score = 55 bits (132), Expect = 5e-008
Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Frame = +3
Query: 372 SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEEDAVQNSLI 551
+R +YVGN+ + +++++ F+S G+V V + D+ G KGF +V+F + +N+L
Sbjct: 284 ARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALN 343
Query: 552 LN-ESELHGRQIKVSA--KRTNVP 614
LN + E+ GR IKVSA +T VP
Sbjct: 344 LNGQLEIAGRAIKVSAVTDQTEVP 367
>TAIR9_protein||AT2G35410.1 | Symbols: | 33 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp33, putative | chr2:14898341-14899590
FORWARD
Length = 309
Score = 55 bits (130), Expect = 8e-008
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 7/119 (5%)
Frame = +3
Query: 300 AEKEMGADQDPSGAISSAEKEEVD-SRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILT 476
AEKE AD++ S + E + + R ++V N+ ++ + ++ + F CGTVN V I+
Sbjct: 69 AEKETSADEETSQEEKTEETQNSNLKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIR 128
Query: 477 DKFGQPKGFAYVEFVEEDAVQNSLILNESELHGRQIKVSAKRTNVPGMRRFRGRRPFRP 653
K G+ +GFA+V + Q ++ ++ +VS + +V RRF+ P P
Sbjct: 129 QKDGKNRGFAFVTMASGEEAQAAIDKFDT------FQVSGRIISVSFARRFKKPTPKSP 181
>TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA binding |
chr3:19421619-19422855 FORWARD
Length = 330
Score = 53 bits (126), Expect = 2e-007
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Frame = +3
Query: 264 EEAGALREMQAKAEKEMGADQDPSGAISSAEKEEVDSRS------IYVGNVDYACTPEEV 425
E + A E+QA E+E +++ E+E+ +++ +YVGN+ Y T E+
Sbjct: 73 EASSADDEIQASVEEEEEVEEEGDEGEEEVEEEKQTTQASGEEGRLYVGNLPYTITSSEL 132
Query: 426 QQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVE-EDAVQNSLILNESELHGRQIKVS 593
Q F GTV V I+ DK + +GF +V E+A + + N S++ GR +KV+
Sbjct: 133 SQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSSQIGGRTVKVN 190
>TAIR9_protein||AT4G14300.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr4:8231179-8232785
FORWARD
Length = 412
Score = 53 bits (125), Expect = 3e-007
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Frame = +3
Query: 267 EAGALREMQAKAEKEMGADQDPSGAISSAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSC 446
E R M + ++ G + + + SS ++ I+VG + T EE +Q+F+
Sbjct: 74 EVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEEFRQYFEVY 133
Query: 447 GTVNRVTILTDK-FGQPKGFAYVEFVEEDAVQNSLILNESELHGRQIKV 590
G V V I+ D+ +P+GF +V F EDAV + L +L G+Q++V
Sbjct: 134 GPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVEV 182
>TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine-rich
RNA-binding protein 5); ATP binding / RNA binding |
chr1:27915346-27916857 FORWARD
Length = 290
Score = 49 bits (116), Expect = 4e-006
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Frame = +3
Query: 366 VDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDK-FGQPKGFAYVEFVEEDAVQN 542
+ S I+VG + Y+ +++ F G V I+ D+ G+ +GFA+V F + N
Sbjct: 31 MSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASN 90
Query: 543 SLILNESELHGRQIKV--SAKRTNVPGMRRFRG 635
++ L+ +LHGR+I+V + +R + G R F G
Sbjct: 91 AMQLDGQDLHGRRIRVNYATERGSGFGGRGFGG 123
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,974,365,541
Number of Sequences: 33410
Number of Extensions: 19974365541
Number of Successful Extensions: 642102319
Number of sequences better than 0.0: 0
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