BLASTX 7.6.2
Query= UN40091 /QuerySize=936
(935 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G20740.1 | Symbols: | FUNCTIONS IN: molecular... 347 6e-096
TAIR9_protein||AT2G20740.2 | Symbols: | unknown protein | chr2:... 276 2e-074
TAIR9_protein||AT2G20740.3 | Symbols: | unknown protein | chr2:... 196 2e-050
TAIR9_protein||AT2G20230.1 | Symbols: | LOCATED IN: plasma memb... 122 5e-028
TAIR9_protein||AT4G28770.1 | Symbols: | FUNCTIONS IN: molecular... 117 1e-026
TAIR9_protein||AT1G32400.1 | Symbols: TOM2A | TOM2A (TOBAMOVIRUS... 97 1e-020
TAIR9_protein||AT1G32400.2 | Symbols: TOM2A | TOM2A (TOBAMOVIRUS... 97 1e-020
TAIR9_protein||AT1G32400.3 | Symbols: TOM2A | TOM2A (TOBAMOVIRUS... 97 1e-020
>TAIR9_protein||AT2G20740.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system, integral to membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Tetraspanin (InterPro:IPR018499); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT2G20230.1); Has 91 Blast hits
to 91 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 1 (source: NCBI
BLink). | chr2:8935788-8937292 FORWARD
Length = 222
Score = 347 bits (890), Expect = 6e-096
Identities = 165/214 (77%), Positives = 191/214 (89%), Gaps = 5/214 (2%)
Frame = +1
Query: 76 MVRMVRSCLQSMMKLVNSLVGTVGVAMILYSVWLIRQWQQQTGSLPFPYPHDDHPLPWFI 255
MVR+VRSCLQSM+KLVNSL+G VG+AMILY+VWLIRQWQ+Q G+LPF DHP+PWFI
Sbjct: 1 MVRIVRSCLQSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQMGNLPF--ADSDHPVPWFI 58
Query: 256 YAFLCLGALLCLVTCAGHIAAETVNSCCLYFYMGFILLLIMIQGGVVADTFLNPDWKQDF 435
Y+FL LGA+LC+VTCAGHIAAETVN CCLY YMGFI+LL M++GGVVAD FLN DWK+DF
Sbjct: 59 YSFLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNRDWKKDF 118
Query: 436 PDDPSGAFIRFSKFVESNFKICRWIGLSIFFVQGASVLLAMLLKALGPHP--HYDSDDEY 609
P+DPSGAF +FSKF+ESNFKIC+WIGLSI VQG SVL+AMLLKALGPHP HYDSDDEY
Sbjct: 119 PEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHYDSDDEY 178
Query: 610 DLSTVSLLRDARQPHRPYVVGEPIYGPKPDSWTV 711
++STV+LL+DARQP PYVVGEP+YG KP +WTV
Sbjct: 179 NVSTVALLQDARQP-PPYVVGEPMYGAKPGAWTV 211
>TAIR9_protein||AT2G20740.2 | Symbols: | unknown protein | chr2:8935911-8937292
FORWARD
Length = 181
Score = 276 bits (705), Expect = 2e-074
Identities = 131/172 (76%), Positives = 151/172 (87%), Gaps = 5/172 (2%)
Frame = +1
Query: 202 GSLPFPYPHDDHPLPWFIYAFLCLGALLCLVTCAGHIAAETVNSCCLYFYMGFILLLIMI 381
G+LPF DHP+PWFIY+FL LGA+LC+VTCAGHIAAETVN CCLY YMGFI+LL M+
Sbjct: 2 GNLPF--ADSDHPVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMV 59
Query: 382 QGGVVADTFLNPDWKQDFPDDPSGAFIRFSKFVESNFKICRWIGLSIFFVQGASVLLAML 561
+GGVVAD FLN DWK+DFP+DPSGAF +FSKF+ESNFKIC+WIGLSI VQG SVL+AML
Sbjct: 60 EGGVVADIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAML 119
Query: 562 LKALGPHP--HYDSDDEYDLSTVSLLRDARQPHRPYVVGEPIYGPKPDSWTV 711
LKALGPHP HYDSDDEY++STV+LL+DARQP PYVVGEP+YG KP +WTV
Sbjct: 120 LKALGPHPHRHYDSDDEYNVSTVALLQDARQP-PPYVVGEPMYGAKPGAWTV 170
>TAIR9_protein||AT2G20740.3 | Symbols: | unknown protein | chr2:8936713-8937292
FORWARD
Length = 132
Score = 196 bits (497), Expect = 2e-050
Identities = 94/122 (77%), Positives = 109/122 (89%), Gaps = 3/122 (2%)
Frame = +1
Query: 352 MGFILLLIMIQGGVVADTFLNPDWKQDFPDDPSGAFIRFSKFVESNFKICRWIGLSIFFV 531
MGFI+LL M++GGVVAD FLN DWK+DFP+DPSGAF +FSKF+ESNFKIC+WIGLSI V
Sbjct: 1 MGFIVLLTMVEGGVVADIFLNRDWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCV 60
Query: 532 QGASVLLAMLLKALGPHP--HYDSDDEYDLSTVSLLRDARQPHRPYVVGEPIYGPKPDSW 705
QG SVL+AMLLKALGPHP HYDSDDEY++STV+LL+DARQP PYVVGEP+YG KP +W
Sbjct: 61 QGLSVLIAMLLKALGPHPHRHYDSDDEYNVSTVALLQDARQP-PPYVVGEPMYGAKPGAW 119
Query: 706 TV 711
TV
Sbjct: 120 TV 121
>TAIR9_protein||AT2G20230.1 | Symbols: | LOCATED IN: plasma membrane, vacuole;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages;
CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G28770.1); Has 91 Blast hits to 91 proteins in 12 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr2:8725762-8727388
FORWARD
Length = 271
Score = 122 bits (304), Expect = 5e-028
Identities = 55/127 (43%), Positives = 82/127 (64%)
Frame = +1
Query: 232 DHPLPWFIYAFLCLGALLCLVTCAGHIAAETVNSCCLYFYMGFILLLIMIQGGVVADTFL 411
D P PWFIY+F+ +G L+C+VT G IAAE +N CCL FY LLI+++ +VA +
Sbjct: 94 DLPAPWFIYSFMAVGILVCIVTFIGFIAAEAINGCCLCFYSILKTLLILLEAALVAYIAI 153
Query: 412 NPDWKQDFPDDPSGAFIRFSKFVESNFKICRWIGLSIFFVQGASVLLAMLLKALGPHPHY 591
+ W++D P DP+G F+E N IC+W+G+++ VQ S+LLAM+L+A+ P
Sbjct: 154 DRHWEKDLPYDPTGELSSLRAFIEENIDICKWVGIAVVAVQLLSLLLAMVLRAMVSTPKP 213
Query: 592 DSDDEYD 612
+ D+E D
Sbjct: 214 ELDEEED 220
>TAIR9_protein||AT4G28770.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN:
26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499); BEST Arabidopsis
thaliana protein match is: unknown protein (TAIR:AT2G20230.1); Has 94
Blast hits to 94 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink). | chr4:14212177-14213518 REVERSE
Length = 282
Score = 117 bits (292), Expect = 1e-026
Identities = 56/137 (40%), Positives = 83/137 (60%), Gaps = 1/137 (0%)
Frame = +1
Query: 232 DHPLPWFIYAFLCLGALLCLVTCAGHIAAETVNSCCLYFYMGFILLLIMIQGGVVADTFL 411
D P PWFIY F+ +G L+C+VT G IAAE +N CCL FY LLI+I+ +V +
Sbjct: 105 DLPAPWFIYCFMAIGILVCIVTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVI 164
Query: 412 NPDWKQDFPDDPSGAFIRFSKFVESNFKICRWIGLSIFFVQGASVLLAMLLKALGPHPHY 591
+ W++D P DP+G F+E N IC+W+G+ + +Q S+LLA++L+A+
Sbjct: 165 DRHWEKDLPYDPTGELNSLRAFIEENIDICKWVGIVVVAIQLLSLLLALVLRAMVSPRQS 224
Query: 592 DSDDEYDL-STVSLLRD 639
+ DDE D + +S RD
Sbjct: 225 ELDDEDDFENPMSRARD 241
>TAIR9_protein||AT1G32400.1 | Symbols: TOM2A | TOM2A (TOBAMOVIRUS MULTIPLICATION
2A); protein binding | chr1:11689393-11690873 REVERSE
Length = 281
Score = 97 bits (240), Expect = 1e-020
Identities = 44/127 (34%), Positives = 70/127 (55%)
Frame = +1
Query: 229 DDHPLPWFIYAFLCLGALLCLVTCAGHIAAETVNSCCLYFYMGFILLLIMIQGGVVADTF 408
D+ P WFIY F+ +G L +++C G + + + CCL Y ++LLI+++ G A F
Sbjct: 74 DNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLILLILVELGFAAFIF 133
Query: 409 LNPDWKQDFPDDPSGAFIRFSKFVESNFKICRWIGLSIFFVQGASVLLAMLLKALGPHPH 588
+ W+ + P D +G F F+ N+KI RW+ L + LLA++++A
Sbjct: 134 FDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFLLALMVRAANTPAE 193
Query: 589 YDSDDEY 609
YDSDDEY
Sbjct: 194 YDSDDEY 200
>TAIR9_protein||AT1G32400.2 | Symbols: TOM2A | TOM2A (TOBAMOVIRUS MULTIPLICATION
2A); protein binding | chr1:11689393-11690873 REVERSE
Length = 281
Score = 97 bits (240), Expect = 1e-020
Identities = 44/127 (34%), Positives = 70/127 (55%)
Frame = +1
Query: 229 DDHPLPWFIYAFLCLGALLCLVTCAGHIAAETVNSCCLYFYMGFILLLIMIQGGVVADTF 408
D+ P WFIY F+ +G L +++C G + + + CCL Y ++LLI+++ G A F
Sbjct: 74 DNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLILLILVELGFAAFIF 133
Query: 409 LNPDWKQDFPDDPSGAFIRFSKFVESNFKICRWIGLSIFFVQGASVLLAMLLKALGPHPH 588
+ W+ + P D +G F F+ N+KI RW+ L + LLA++++A
Sbjct: 134 FDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFLLALMVRAANTPAE 193
Query: 589 YDSDDEY 609
YDSDDEY
Sbjct: 194 YDSDDEY 200
>TAIR9_protein||AT1G32400.3 | Symbols: TOM2A | TOM2A (TOBAMOVIRUS MULTIPLICATION
2A); protein binding | chr1:11689393-11690873 REVERSE
Length = 281
Score = 97 bits (240), Expect = 1e-020
Identities = 44/127 (34%), Positives = 70/127 (55%)
Frame = +1
Query: 229 DDHPLPWFIYAFLCLGALLCLVTCAGHIAAETVNSCCLYFYMGFILLLIMIQGGVVADTF 408
D+ P WFIY F+ +G L +++C G + + + CCL Y ++LLI+++ G A F
Sbjct: 74 DNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLILLILVELGFAAFIF 133
Query: 409 LNPDWKQDFPDDPSGAFIRFSKFVESNFKICRWIGLSIFFVQGASVLLAMLLKALGPHPH 588
+ W+ + P D +G F F+ N+KI RW+ L + LLA++++A
Sbjct: 134 FDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLFLLALMVRAANTPAE 193
Query: 589 YDSDDEY 609
YDSDDEY
Sbjct: 194 YDSDDEY 200
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,974,365,541
Number of Sequences: 33410
Number of Extensions: 19974365541
Number of Successful Extensions: 642102319
Number of sequences better than 0.0: 0
|
