BLASTX 7.6.2
Query= UN40151 /QuerySize=839
(838 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G55310.1 | Symbols: SR33, ATSCL33, SCL33 | SR3... 217 1e-056
TAIR9_protein||AT3G13570.1 | Symbols: SCL30A | SCL30a; RNA bindi... 216 2e-056
TAIR9_protein||AT1G55310.2 | Symbols: SR33, ATSCL33, SCL33 | SR3... 215 4e-056
TAIR9_protein||AT3G55460.1 | Symbols: SCL30 | SCL30; RNA binding... 158 7e-039
TAIR9_protein||AT5G18810.1 | Symbols: SCL28 | SCL28; RNA binding... 153 1e-037
TAIR9_protein||AT5G64200.1 | Symbols: ATSC35, SC35 | ATSC35; RNA... 100 2e-021
TAIR9_protein||AT5G64200.2 | Symbols: ATSC35, SC35 | ATSC35; RNA... 100 2e-021
TAIR9_protein||AT1G07350.1 | Symbols: | transformer serine/argi... 76 3e-014
TAIR9_protein||AT3G08000.1 | Symbols: | RNA-binding protein, pu... 55 4e-008
TAIR9_protein||AT1G07350.2 | Symbols: | transformer serine/argi... 51 9e-007
TAIR9_protein||AT4G31580.1 | Symbols: SRZ-22, SRZ22, RSZP22 | SR... 51 9e-007
TAIR9_protein||AT4G32420.1 | Symbols: | peptidyl-prolyl cis-tra... 50 1e-006
TAIR9_protein||AT4G32420.2 | Symbols: | peptidyl-prolyl cis-tra... 50 1e-006
TAIR9_protein||AT5G54580.1 | Symbols: | RNA recognition motif (... 50 1e-006
TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-bindin... 50 2e-006
TAIR9_protein||AT3G11400.1 | Symbols: EIF3G1, ATEIF3G1 | eukaryo... 49 3e-006
TAIR9_protein||AT3G11400.2 | Symbols: EIF3G1, ATEIF3G1 | eukaryo... 49 3e-006
TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 49 5e-006
TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 49 5e-006
TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR... 49 5e-006
>TAIR9_protein||AT1G55310.1 | Symbols: SR33, ATSCL33, SCL33 | SR33; RNA binding
/ protein binding | chr1:20630676-20632695 FORWARD
Length = 288
Score = 217 bits (551), Expect = 1e-056
Identities = 128/224 (57%), Positives = 144/224 (64%), Gaps = 15/224 (6%)
Frame = +3
Query: 81 RSYSYSPSPPR---RRYRSPSPVGHYRGRSRDPSTSLLVRNLRLDCRPDDLRRPFGRFGR 251
R SY+PSPPR RR RSPSP G Y GRSRD TSLLVRNLR DCR +DLR+ F +FG
Sbjct: 2 RGRSYTPSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQFGP 61
Query: 252 LKDIYIPRNYYTGEPRGFGFVQYYDPADAADAKYHLDGYVLLGREITVVFAEENRKKPSE 431
+KDIY+PR+YYTG+PRGFGFVQ+ DPADAADAK+H+DGY+LLGRE+TVVFAEENRKKP+E
Sbjct: 62 VKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTE 121
Query: 432 MRERSRGRTSTRS-----PYGYSRSPGYSRSPNYRRSYSRSPVHRRSYSRSPVYRRSYSR 596
MR R RG R P YSR SRSP RR SRS R SP RR + R
Sbjct: 122 MRARERGGGRFRDRRRTPPRYYSR----SRSPPPRRGRSRS---RSGDYYSPPPRRHHPR 174
Query: 597 SPYDENRSRRRRRSYSRSSTRSRYESRSRARVLDTLADLLYNPR 728
S RRSYSRS RS V L +PR
Sbjct: 175 SISPREERYDGRRSYSRSPASDGSRGRSLTPVRGKSRSLSPSPR 218
>TAIR9_protein||AT3G13570.1 | Symbols: SCL30A | SCL30a; RNA binding / nucleic
acid binding / nucleotide binding | chr3:4429564-4431602 REVERSE
Length = 263
Score = 216 bits (549), Expect = 2e-056
Identities = 123/210 (58%), Positives = 144/210 (68%), Gaps = 8/210 (3%)
Frame = +3
Query: 81 RSYSYSPSPPR---RRYRSPSPVGHYRG-RSRDPSTSLLVRNLRLDCRPDDLRRPFGRFG 248
R SY+PSPPR RR RSPSP G + G R D TSLLVRNLR DCR +DLRRPF +FG
Sbjct: 2 RGRSYTPSPPRGYGRRGRSPSPRGRFGGSRDSDLPTSLLVRNLRHDCRQEDLRRPFEQFG 61
Query: 249 RLKDIYIPRNYYTGEPRGFGFVQYYDPADAADAKYHLDGYVLLGREITVVFAEENRKKPS 428
+KDIY+PR+YYTG+PRGFGF+Q+ DPADAA+AK+ +DGY+LLGRE+TVVFAEENRKKP+
Sbjct: 62 PVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAEENRKKPT 121
Query: 429 EMRERSRGRTSTRSPYGYSRSPGYSRSPNYRRSYSRSPVHRRSYSRSPVYRRSYSRSPYD 608
EMR R RG S R P YSRSP RR RS R Y+ SP +R SRS
Sbjct: 122 EMRTRDRGGRSNRFQDRRRSPPRYSRSPPPRRG-RRSRSRSRGYN-SPPAKRHQSRSVSP 179
Query: 609 ENRSRRRRRSYSRSSTR--SRYESRSRARV 692
++R + RSYSRS SR S S RV
Sbjct: 180 QDRRYEKERSYSRSPPHNGSRVRSGSPGRV 209
>TAIR9_protein||AT1G55310.2 | Symbols: SR33, ATSCL33, SCL33 | SR33; RNA binding
/ protein binding | chr1:20630676-20632567 FORWARD
Length = 221
Score = 215 bits (546), Expect = 4e-056
Identities = 124/208 (59%), Positives = 139/208 (66%), Gaps = 15/208 (7%)
Frame = +3
Query: 81 RSYSYSPSPPR---RRYRSPSPVGHYRGRSRDPSTSLLVRNLRLDCRPDDLRRPFGRFGR 251
R SY+PSPPR RR RSPSP G Y GRSRD TSLLVRNLR DCR +DLR+ F +FG
Sbjct: 2 RGRSYTPSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQFGP 61
Query: 252 LKDIYIPRNYYTGEPRGFGFVQYYDPADAADAKYHLDGYVLLGREITVVFAEENRKKPSE 431
+KDIY+PR+YYTG+PRGFGFVQ+ DPADAADAK+H+DGY+LLGRE+TVVFAEENRKKP+E
Sbjct: 62 VKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTE 121
Query: 432 MRERSRGRTSTRS-----PYGYSRSPGYSRSPNYRRSYSRSPVHRRSYSRSPVYRRSYSR 596
MR R RG R P YSR SRSP RR SRS R SP RR + R
Sbjct: 122 MRARERGGGRFRDRRRTPPRYYSR----SRSPPPRRGRSRS---RSGDYYSPPPRRHHPR 174
Query: 597 SPYDENRSRRRRRSYSRSSTRSRYESRS 680
S RRSYSRS RS
Sbjct: 175 SISPREERYDGRRSYSRSPASDGSRGRS 202
>TAIR9_protein||AT3G55460.1 | Symbols: SCL30 | SCL30; RNA binding / nucleic acid
binding / nucleotide binding | chr3:20561024-20563502 FORWARD
Length = 263
Score = 158 bits (397), Expect = 7e-039
Identities = 96/195 (49%), Positives = 119/195 (61%), Gaps = 12/195 (6%)
Frame = +3
Query: 78 GRSYSYSPSPPRRRYRSPSPVGHYRGRSRDPSTSLLVRNLRLDCRPDDLRRPFGRFGRLK 257
GR S P PPRR Y G RG S SLLVRN+ LDCRP++LR PF RFG ++
Sbjct: 18 GRGRSPPPPPPRRGYGGGGGGGGRRGSSHG---SLLVRNIPLDCRPEELREPFERFGPVR 74
Query: 258 DIYIPRNYYTGEPRGFGFVQYYDPADAADAKYHLDGYVLLGREITVVFAEENRKKPSEMR 437
D+YIPR+YY+G+PRGF FV++ D DA +A+ ++ GREITVV A E+RK+P EMR
Sbjct: 75 DVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGREITVVVASESRKRPEEMR 134
Query: 438 ERSRGRT-----STRSPYGYSRSPGYSRSPNYRR-SYSRSPVHRRSYSRSPVYRRSYSRS 599
++R R+ S +G SRS SRS + RR S SRS RSYS +P R R
Sbjct: 135 VKTRTRSREPSGSRDRSHGRSRSRSISRSRSPRRPSDSRSRYRSRSYSPAPRRRGGPPRG 194
Query: 600 PYDENRSRRRRRSYS 644
DEN S RRSYS
Sbjct: 195 EEDENYS---RRSYS 206
>TAIR9_protein||AT5G18810.1 | Symbols: SCL28 | SCL28; RNA binding / nucleic acid
binding / nucleotide binding | chr5:6268925-6271158 REVERSE
Length = 237
Score = 153 bits (386), Expect = 1e-037
Identities = 111/231 (48%), Positives = 128/231 (55%), Gaps = 29/231 (12%)
Frame = +3
Query: 81 RSYSYSP-----SPPRRRYRSPSPVGHYRGRSRDPSTS----LLVRNLRLDCRPDDLRRP 233
RS SYSP SPPR R R SRD +S LL+RNL LD RP+DLR
Sbjct: 7 RSRSYSPRPRDRSPPRERKGYDDNRLRERPSSRDHESSGPSGLLIRNLPLDARPNDLRDS 66
Query: 234 FGRFGRLKDIYIPRNYYTGEPRGFGFVQYYDPADAADAKYHLDGYVLLGREITVVFAEEN 413
F RFG LKDIY+PRNYYTGEPRGFGFV+Y DAA+A ++ V+ GREI +VFAEEN
Sbjct: 67 FERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRMNHKVIGGREIAIVFAEEN 126
Query: 414 RKKPSEMRERS--------RGRTSTRSPYGYSRSPGYSRSPNYRRS-YSR-------SPV 545
RK P EMR + RTS RSP RS SRSP R S +S+ SP
Sbjct: 127 RKTPQEMRTTNGTSGRHGDYKRTSHRSPRRRYRSHSRSRSPPRRESRHSKVREDDLYSPR 186
Query: 546 HR-RSYSRSPVYRRSYSRSPYDENRSRRRRRSYSRSSTRSRYESRSRARVL 695
R RS SRSP+ R + Y R R + RSR SRSR+R L
Sbjct: 187 RRSRSISRSPLPR---NEREYKSRNCRSPREERVLTPIRSRCLSRSRSRSL 234
>TAIR9_protein||AT5G64200.1 | Symbols: ATSC35, SC35 | ATSC35; RNA binding /
nucleic acid binding / nucleotide binding | chr5:25681849-25683553
REVERSE
Length = 304
Score = 100 bits (247), Expect = 2e-021
Identities = 83/185 (44%), Positives = 101/185 (54%), Gaps = 19/185 (10%)
Frame = +3
Query: 153 GRSRDP----STSLLVRNLRLDCRPDDLRRPFGRFGRLKDIYIPRNYYTGEPRGFGFVQY 320
GRS P + SLLV N+ DDL F ++G++ D++IPR+ TG+ RGF FV+Y
Sbjct: 5 GRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 321 YDPADAADAKYHLDGYVLLGREITVVFAE--ENRKKPSEMRERSRGRTSTRSPYGYSRSP 494
+A A LDG V+ GREITV FA+ N +K S+ R S RS SRSP
Sbjct: 65 KYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRVVEPPPKSRRS---RSRSP 121
Query: 495 GYSRSPNYRRSYSRSPVHRRSYSRSPVYRRSYSRSPYDEN--RSRRRRRSYSRSSTRSRY 668
SRSP RR SRSP RRS RS RR SR Y E R R R RSY R R R+
Sbjct: 122 RRSRSP--RR--SRSPPRRRSPRRSRSPRRR-SRDDYREKDYRKRSRSRSYDR---RERH 173
Query: 669 ESRSR 683
E + R
Sbjct: 174 EEKDR 178
>TAIR9_protein||AT5G64200.2 | Symbols: ATSC35, SC35 | ATSC35; RNA binding /
nucleic acid binding / nucleotide binding | chr5:25681849-25683553
REVERSE
Length = 304
Score = 100 bits (247), Expect = 2e-021
Identities = 83/185 (44%), Positives = 101/185 (54%), Gaps = 19/185 (10%)
Frame = +3
Query: 153 GRSRDP----STSLLVRNLRLDCRPDDLRRPFGRFGRLKDIYIPRNYYTGEPRGFGFVQY 320
GRS P + SLLV N+ DDL F ++G++ D++IPR+ TG+ RGF FV+Y
Sbjct: 5 GRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 321 YDPADAADAKYHLDGYVLLGREITVVFAE--ENRKKPSEMRERSRGRTSTRSPYGYSRSP 494
+A A LDG V+ GREITV FA+ N +K S+ R S RS SRSP
Sbjct: 65 KYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRVVEPPPKSRRS---RSRSP 121
Query: 495 GYSRSPNYRRSYSRSPVHRRSYSRSPVYRRSYSRSPYDEN--RSRRRRRSYSRSSTRSRY 668
SRSP RR SRSP RRS RS RR SR Y E R R R RSY R R R+
Sbjct: 122 RRSRSP--RR--SRSPPRRRSPRRSRSPRRR-SRDDYREKDYRKRSRSRSYDR---RERH 173
Query: 669 ESRSR 683
E + R
Sbjct: 174 EEKDR 178
>TAIR9_protein||AT1G07350.1 | Symbols: | transformer serine/arginine-rich
ribonucleoprotein, putative | chr1:2257732-2260101 REVERSE
Length = 383
Score = 76 bits (185), Expect = 3e-014
Identities = 74/207 (35%), Positives = 90/207 (43%), Gaps = 14/207 (6%)
Frame = +3
Query: 84 SYSYSPSPPRR-----RYRSPSPVGHYRGRSRDPSTSLLVRNLRLDCRPDDLRRPFGRFG 248
S S SP RR R S SP + +P SL V L DL F + G
Sbjct: 40 SPSLSPYDKRRGRSVSRSLSRSPTRSVSSDAENPGNSLYVTGLSHRVTERDLEDHFAKEG 99
Query: 249 RLKDIYIPRNYYTGEPRGFGFVQYYDPADAADAKYHLDGYVLLGREITVVFAEENRKKPS 428
++ D+++ + +T E RGFGF+ DA LD VL GR ITV A R
Sbjct: 100 KVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRSLDHSVLQGRVITVEKARRRRG--- 156
Query: 429 EMRERSRGR-TSTRSPYGYSRSPGYS--RSPNYRRSYSRSPVHRRSYSRSPVYRRSYSRS 599
R + G+ R+ G +SP YS RS + RS SRS R S SP Y R S
Sbjct: 157 --RTPTPGKYLGLRTARGRHKSPSYSPRRSVSCSRSRSRSYSSDRGRSYSPSYGRRGRSS 214
Query: 600 PYDENRSRRRRRSYSRS-STRSRYESR 677
Y RRR S SRS S RY R
Sbjct: 215 SYSPFYRRRRFYSPSRSPSPDDRYNRR 241
>TAIR9_protein||AT3G08000.1 | Symbols: | RNA-binding protein, putative |
chr3:2555034-2555829 REVERSE
Length = 144
Score = 55 bits (132), Expect = 4e-008
Identities = 30/84 (35%), Positives = 43/84 (51%)
Frame = +3
Query: 159 SRDPSTSLLVRNLRLDCRPDDLRRPFGRFGRLKDIYIPRNYYTGEPRGFGFVQYYDPADA 338
S PS+ L + L L+ F FG + ++ I + +G RGFGFV + + DA
Sbjct: 36 SASPSSKLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDA 95
Query: 339 ADAKYHLDGYVLLGREITVVFAEE 410
AK +DG LLGR + + FA E
Sbjct: 96 LSAKDAMDGKGLLGRPLRISFALE 119
>TAIR9_protein||AT1G07350.2 | Symbols: | transformer serine/arginine-rich
ribonucleoprotein, putative | chr1:2258816-2259586 REVERSE
Length = 130
Score = 51 bits (120), Expect = 9e-007
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Frame = +3
Query: 84 SYSYSPSPPRR-----RYRSPSPVGHYRGRSRDPSTSLLVRNLRLDCRPDDLRRPFGRFG 248
S S SP RR R S SP + +P SL V L DL F + G
Sbjct: 10 SPSLSPYDKRRGRSVSRSLSRSPTRSVSSDAENPGNSLYVTGLSHRVTERDLEDHFAKEG 69
Query: 249 RLKDIYIPRNYYTGEPRGFGFVQYYDPADAADAKYHLDGYVLLGREITV 395
++ D+++ + +T E RGFGF+ DA LD VL GR ITV
Sbjct: 70 KVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRSLDHSVLQGRVITV 118
>TAIR9_protein||AT4G31580.1 | Symbols: SRZ-22, SRZ22, RSZP22 | SRZ-22; protein
binding | chr4:15306983-15308064 FORWARD
Length = 201
Score = 51 bits (120), Expect = 9e-007
Identities = 37/94 (39%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Frame = +3
Query: 399 FAEENRKKPSEMRERSRGRTSTRSPYGYSRSPGYSRSPNYRRSYSRSPVHRRSYSRSPVY 578
FA E R + R RS+ R +R+P Y RSP Y R R+ S P RRS S P
Sbjct: 110 FARECRNRGGTGRRRSKSR--SRTPPRYRRSPSYGRRSYSPRARSPPPPRRRSPSPPPAR 167
Query: 579 RRSYSRSPYDENRSRRRRRSYSRSSTRSRYESRS 680
RSYSRSP R+R + + + R SRS
Sbjct: 168 GRSYSRSP-PPYRAREEVPYANGNGLKERRRSRS 200
>TAIR9_protein||AT4G32420.1 | Symbols: | peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein | chr4:15647550-15652103 REVERSE
Length = 838
Score = 50 bits (119), Expect = 1e-006
Identities = 30/67 (44%), Positives = 40/67 (59%)
Frame = +3
Query: 480 YSRSPGYSRSPNYRRSYSRSPVHRRSYSRSPVYRRSYSRSPYDENRSRRRRRSYSRSSTR 659
YSRSP SRSP YR+ S S H S SRS +SYS+SP ++R RS S++ +
Sbjct: 756 YSRSPIRSRSPPYRKRRSPSASHSLSPSRSRSRSKSYSKSPIGTGKARSVSRSPSKARSP 815
Query: 660 SRYESRS 680
S+ +S S
Sbjct: 816 SKSDSTS 822
>TAIR9_protein||AT4G32420.2 | Symbols: | peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein | chr4:15647550-15650678 REVERSE
Length = 728
Score = 50 bits (119), Expect = 1e-006
Identities = 30/67 (44%), Positives = 40/67 (59%)
Frame = +3
Query: 480 YSRSPGYSRSPNYRRSYSRSPVHRRSYSRSPVYRRSYSRSPYDENRSRRRRRSYSRSSTR 659
YSRSP SRSP YR+ S S H S SRS +SYS+SP ++R RS S++ +
Sbjct: 646 YSRSPIRSRSPPYRKRRSPSASHSLSPSRSRSRSKSYSKSPIGTGKARSVSRSPSKARSP 705
Query: 660 SRYESRS 680
S+ +S S
Sbjct: 706 SKSDSTS 712
>TAIR9_protein||AT5G54580.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:22171332-22172656 FORWARD
Length = 157
Score = 50 bits (119), Expect = 1e-006
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Frame = +3
Query: 165 DPSTSLLVRNLRLDCRPDDLRRPFGRFGRLKDIYIPRNYYTGEPRGFGFVQYYDPADAAD 344
+PST+L V L + LR F +FG + D + + +G +GFGFV+Y D+A
Sbjct: 53 EPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSAK 112
Query: 345 AKYHLDGYVLLGREITVVFAEENRKKPSEMRERSRGRTSTRSPY 476
+DG L G V+FAE R + + + S R PY
Sbjct: 113 GIAGMDGKFLDG---WVIFAEYARPREQSQSYQPQNNMS-RPPY 152
>TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-binding protein,
putative | chr4:8022601-8023162 FORWARD
Length = 88
Score = 50 bits (118), Expect = 2e-006
Identities = 28/75 (37%), Positives = 39/75 (52%)
Frame = +3
Query: 171 STSLLVRNLRLDCRPDDLRRPFGRFGRLKDIYIPRNYYTGEPRGFGFVQYYDPADAADAK 350
+T + V NL D LR F +G + D + R+ YT RGFGFV Y ++A A
Sbjct: 2 ATRVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAV 61
Query: 351 YHLDGYVLLGREITV 395
+DG L GR ++V
Sbjct: 62 SGMDGKELNGRRVSV 76
>TAIR9_protein||AT3G11400.1 | Symbols: EIF3G1, ATEIF3G1 | eukaryotic translation
initiation factor 3G / eIF3g | chr3:3578536-3580366 FORWARD
Length = 295
Score = 49 bits (116), Expect = 3e-006
Identities = 28/71 (39%), Positives = 36/71 (50%)
Frame = +3
Query: 156 RSRDPSTSLLVRNLRLDCRPDDLRRPFGRFGRLKDIYIPRNYYTGEPRGFGFVQYYDPAD 335
R R+ S+ V NL D R DL F FG + +Y+ + TG RGFGFV + D
Sbjct: 207 RRRNDENSVRVTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSRED 266
Query: 336 AADAKYHLDGY 368
A A L+GY
Sbjct: 267 AQRAINKLNGY 277
>TAIR9_protein||AT3G11400.2 | Symbols: EIF3G1, ATEIF3G1 | eukaryotic translation
initiation factor 3G / eIF3g | chr3:3578536-3580366 FORWARD
Length = 322
Score = 49 bits (116), Expect = 3e-006
Identities = 28/71 (39%), Positives = 36/71 (50%)
Frame = +3
Query: 156 RSRDPSTSLLVRNLRLDCRPDDLRRPFGRFGRLKDIYIPRNYYTGEPRGFGFVQYYDPAD 335
R R+ S+ V NL D R DL F FG + +Y+ + TG RGFGFV + D
Sbjct: 234 RRRNDENSVRVTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSRED 293
Query: 336 AADAKYHLDGY 368
A A L+GY
Sbjct: 294 AQRAINKLNGY 304
>TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 49 bits (114), Expect = 5e-006
Identities = 33/100 (33%), Positives = 44/100 (44%)
Frame = +3
Query: 126 SPSPVGHYRGRSRDPSTSLLVRNLRLDCRPDDLRRPFGRFGRLKDIYIPRNYYTGEPRGF 305
S PV G R S+ L V L L++ F FG + + + + TG RGF
Sbjct: 19 SNGPVTSMLGSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGF 78
Query: 306 GFVQYYDPADAADAKYHLDGYVLLGREITVVFAEENRKKP 425
GFV + A +A +DG L GR+I V A E P
Sbjct: 79 GFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSSAP 118
>TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 49 bits (114), Expect = 5e-006
Identities = 33/100 (33%), Positives = 44/100 (44%)
Frame = +3
Query: 126 SPSPVGHYRGRSRDPSTSLLVRNLRLDCRPDDLRRPFGRFGRLKDIYIPRNYYTGEPRGF 305
S PV G R S+ L V L L++ F FG + + + + TG RGF
Sbjct: 19 SNGPVTSMLGSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGF 78
Query: 306 GFVQYYDPADAADAKYHLDGYVLLGREITVVFAEENRKKP 425
GFV + A +A +DG L GR+I V A E P
Sbjct: 79 GFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSSAP 118
>TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR-RBP2
(GLYCINE-RICH RNA-BINDING PROTEIN 2); ATP binding / RNA binding /
double-stranded DNA binding / single-stranded DNA binding |
chr4:8021314-8022065 FORWARD
Length = 159
Score = 49 bits (114), Expect = 5e-006
Identities = 40/121 (33%), Positives = 49/121 (40%), Gaps = 3/121 (2%)
Frame = +3
Query: 135 PVGHYRGRSRDPSTSLLVRNLRLDCRPDDLRRPFGRFGRLKDIYIPRNYYTGEPRGFGFV 314
PV G R ST L + L LR F FG + D + + TG RGFGFV
Sbjct: 22 PVTSMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFV 81
Query: 315 QYYDPADAADAKYHLDGYVLLGREITVVFAEENRKKPSEMRERSRGRTSTRSPYGYSRSP 494
+ D A A +DG L GR I V A + +PS R G + GY
Sbjct: 82 NFNDEGAATAAISEMDGKELNGRHIRVNPAND---RPSAPRAYGGGGGYSGGGGGYGGGG 138
Query: 495 G 497
G
Sbjct: 139 G 139
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,020,007,257
Number of Sequences: 33410
Number of Extensions: 20020007257
Number of Successful Extensions: 642117560
Number of sequences better than 0.0: 0
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