BLASTX 7.6.2
Query= UN40213 /QuerySize=420
(419 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G70600.1 | Symbols: | structural constituent ... 159 9e-040
TAIR9_protein||AT1G23290.1 | Symbols: RPL27A, RPL27AB | RPL27AB;... 157 3e-039
TAIR9_protein||AT1G12960.1 | Symbols: | 60S ribosomal protein L... 61 2e-010
>TAIR9_protein||AT1G70600.1 | Symbols: | structural constituent of ribosome |
chr1:26621168-26621608 REVERSE
Length = 147
Score = 159 bits (400), Expect = 9e-040
Identities = 76/83 (91%), Positives = 79/83 (95%)
Frame = +3
Query: 3 RNKFYCPIVNLDKLWSLVPEDVKGKATKDKVPMIDVTQHGFFKVLGKGHLPEGKPFVVKA 182
RNKF+CPIVNLDKLWSLVPEDVK K+TKD VP+IDVTQHGFFKVLGKGHLPE KPFVVKA
Sbjct: 65 RNKFFCPIVNLDKLWSLVPEDVKAKSTKDNVPLIDVTQHGFFKVLGKGHLPENKPFVVKA 124
Query: 183 KLISKTAEKKIKEAGGAVVLTA* 251
KLISKTAEKKIKEAGGAVVLTA*
Sbjct: 125 KLISKTAEKKIKEAGGAVVLTA* 147
>TAIR9_protein||AT1G23290.1 | Symbols: RPL27A, RPL27AB | RPL27AB; structural
constituent of ribosome | chr1:8263007-8263447 FORWARD
Length = 147
Score = 157 bits (396), Expect = 3e-039
Identities = 75/83 (90%), Positives = 79/83 (95%)
Frame = +3
Query: 3 RNKFYCPIVNLDKLWSLVPEDVKGKATKDKVPMIDVTQHGFFKVLGKGHLPEGKPFVVKA 182
RNKF+CPIVNLDKLWSLVPEDVK K++KD VP+IDVTQHGFFKVLGKGHLPE KPFVVKA
Sbjct: 65 RNKFFCPIVNLDKLWSLVPEDVKAKSSKDNVPLIDVTQHGFFKVLGKGHLPENKPFVVKA 124
Query: 183 KLISKTAEKKIKEAGGAVVLTA* 251
KLISKTAEKKIKEAGGAVVLTA*
Sbjct: 125 KLISKTAEKKIKEAGGAVVLTA* 147
>TAIR9_protein||AT1G12960.1 | Symbols: | 60S ribosomal protein L27A (RPL27aA) |
chr1:4422707-4423155 REVERSE
Length = 105
Score = 61 bits (147), Expect = 2e-010
Identities = 31/38 (81%), Positives = 32/38 (84%)
Frame = +3
Query: 132 VLGKGHLPEGKPFVVKAKLISKTAEKKIKEAGGAVVLT 245
VLGKG LPE KP VVKAKL+S T EKKIKEAG AVVLT
Sbjct: 63 VLGKGFLPENKPVVVKAKLVSNTDEKKIKEAGSAVVLT 100
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,020,007,257
Number of Sequences: 33410
Number of Extensions: 20020007257
Number of Successful Extensions: 642117560
Number of sequences better than 0.0: 0
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