BLASTX 7.6.2
Query= UN40359 /QuerySize=1075
(1074 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G20380.2 | Symbols: LSD1 | zinc finger protein... 307 8e-084
TAIR9_protein||AT4G20380.1 | Symbols: LSD1 | zinc finger protein... 305 3e-083
TAIR9_protein||AT4G20380.7 | Symbols: LSD1 | zinc finger protein... 305 4e-083
TAIR9_protein||AT4G20380.3 | Symbols: LSD1 | zinc finger protein... 303 1e-082
TAIR9_protein||AT4G20380.4 | Symbols: LSD1 | zinc finger protein... 303 1e-082
TAIR9_protein||AT4G20380.5 | Symbols: LSD1 | zinc finger protein... 303 1e-082
TAIR9_protein||AT4G20380.6 | Symbols: LSD1 | zinc finger protein... 303 1e-082
TAIR9_protein||AT4G20380.8 | Symbols: | zinc finger protein (LS... 156 2e-038
>TAIR9_protein||AT4G20380.2 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005012-11006438 FORWARD
Length = 190
Score = 307 bits (786), Expect = 8e-084
Identities = 157/211 (74%), Positives = 169/211 (80%), Gaps = 30/211 (14%)
Frame = +3
Query: 201 KPGEMQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHHAHVGMDMA 380
K +MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMA
Sbjct: 2 KVADMQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH--------DMA 49
Query: 381 HIVCGGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAH--------ISCGNCRT 536
HI+CGGCRTMLMYTRGA+SVRCSCCQT NLV PAH+NQ AH I+CG+CRT
Sbjct: 50 HIICGGCRTMLMYTRGASSVRCSCCQTTNLV----PAHSNQVAHAPSSQVAQINCGHCRT 105
Query: 537 TLMYPYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPGSMPPSTSTQSTPPFQT 716
TLMYPYGA SV+CAVCQFVTNVNM NGRVP PTN PNGT + PPSTST STPP QT
Sbjct: 106 TLMYPYGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGT-----ACPPSTST-STPPSQT 159
Query: 717 QTVVVENPMSVNESGKLVSNVVVGVTTEKK* 809
QTVVVENPMSV+ESGKLVSNVVVGVTT+KK*
Sbjct: 160 QTVVVENPMSVDESGKLVSNVVVGVTTDKK* 190
>TAIR9_protein||AT4G20380.1 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 185
Score = 305 bits (781), Expect = 3e-083
Identities = 156/207 (75%), Positives = 167/207 (80%), Gaps = 30/207 (14%)
Frame = +3
Query: 213 MQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHHAHVGMDMAHIVC 392
MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMAHI+C
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH--------DMAHIIC 48
Query: 393 GGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAH--------ISCGNCRTTLMY 548
GGCRTMLMYTRGA+SVRCSCCQT NLV PAH+NQ AH I+CG+CRTTLMY
Sbjct: 49 GGCRTMLMYTRGASSVRCSCCQTTNLV----PAHSNQVAHAPSSQVAQINCGHCRTTLMY 104
Query: 549 PYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPGSMPPSTSTQSTPPFQTQTVV 728
PYGA SV+CAVCQFVTNVNM NGRVP PTN PNGT + PPSTST STPP QTQTVV
Sbjct: 105 PYGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGT-----ACPPSTST-STPPSQTQTVV 158
Query: 729 VENPMSVNESGKLVSNVVVGVTTEKK* 809
VENPMSV+ESGKLVSNVVVGVTT+KK*
Sbjct: 159 VENPMSVDESGKLVSNVVVGVTTDKK* 185
>TAIR9_protein||AT4G20380.7 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005012-11006438 FORWARD
Length = 190
Score = 305 bits (780), Expect = 4e-083
Identities = 156/209 (74%), Positives = 168/209 (80%), Gaps = 30/209 (14%)
Frame = +3
Query: 201 KPGEMQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHHAHVGMDMA 380
K +MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMA
Sbjct: 2 KVADMQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH--------DMA 49
Query: 381 HIVCGGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAH--------ISCGNCRT 536
HI+CGGCRTMLMYTRGA+SVRCSCCQT NLV PAH+NQ AH I+CG+CRT
Sbjct: 50 HIICGGCRTMLMYTRGASSVRCSCCQTTNLV----PAHSNQVAHAPSSQVAQINCGHCRT 105
Query: 537 TLMYPYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPGSMPPSTSTQSTPPFQT 716
TLMYPYGA SV+CAVCQFVTNVNM NGRVP PTN PNGT + PPSTST STPP QT
Sbjct: 106 TLMYPYGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGT-----ACPPSTST-STPPSQT 159
Query: 717 QTVVVENPMSVNESGKLVSNVVVGVTTEK 803
QTVVVENPMSV+ESGKLVSNVVVGVTT+K
Sbjct: 160 QTVVVENPMSVDESGKLVSNVVVGVTTDK 188
>TAIR9_protein||AT4G20380.3 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 185
Score = 303 bits (775), Expect = 1e-082
Identities = 155/205 (75%), Positives = 166/205 (80%), Gaps = 30/205 (14%)
Frame = +3
Query: 213 MQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHHAHVGMDMAHIVC 392
MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMAHI+C
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH--------DMAHIIC 48
Query: 393 GGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAH--------ISCGNCRTTLMY 548
GGCRTMLMYTRGA+SVRCSCCQT NLV PAH+NQ AH I+CG+CRTTLMY
Sbjct: 49 GGCRTMLMYTRGASSVRCSCCQTTNLV----PAHSNQVAHAPSSQVAQINCGHCRTTLMY 104
Query: 549 PYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPGSMPPSTSTQSTPPFQTQTVV 728
PYGA SV+CAVCQFVTNVNM NGRVP PTN PNGT + PPSTST STPP QTQTVV
Sbjct: 105 PYGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGT-----ACPPSTST-STPPSQTQTVV 158
Query: 729 VENPMSVNESGKLVSNVVVGVTTEK 803
VENPMSV+ESGKLVSNVVVGVTT+K
Sbjct: 159 VENPMSVDESGKLVSNVVVGVTTDK 183
>TAIR9_protein||AT4G20380.4 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 185
Score = 303 bits (775), Expect = 1e-082
Identities = 155/205 (75%), Positives = 166/205 (80%), Gaps = 30/205 (14%)
Frame = +3
Query: 213 MQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHHAHVGMDMAHIVC 392
MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMAHI+C
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH--------DMAHIIC 48
Query: 393 GGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAH--------ISCGNCRTTLMY 548
GGCRTMLMYTRGA+SVRCSCCQT NLV PAH+NQ AH I+CG+CRTTLMY
Sbjct: 49 GGCRTMLMYTRGASSVRCSCCQTTNLV----PAHSNQVAHAPSSQVAQINCGHCRTTLMY 104
Query: 549 PYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPGSMPPSTSTQSTPPFQTQTVV 728
PYGA SV+CAVCQFVTNVNM NGRVP PTN PNGT + PPSTST STPP QTQTVV
Sbjct: 105 PYGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGT-----ACPPSTST-STPPSQTQTVV 158
Query: 729 VENPMSVNESGKLVSNVVVGVTTEK 803
VENPMSV+ESGKLVSNVVVGVTT+K
Sbjct: 159 VENPMSVDESGKLVSNVVVGVTTDK 183
>TAIR9_protein||AT4G20380.5 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 185
Score = 303 bits (775), Expect = 1e-082
Identities = 155/205 (75%), Positives = 166/205 (80%), Gaps = 30/205 (14%)
Frame = +3
Query: 213 MQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHHAHVGMDMAHIVC 392
MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMAHI+C
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH--------DMAHIIC 48
Query: 393 GGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAH--------ISCGNCRTTLMY 548
GGCRTMLMYTRGA+SVRCSCCQT NLV PAH+NQ AH I+CG+CRTTLMY
Sbjct: 49 GGCRTMLMYTRGASSVRCSCCQTTNLV----PAHSNQVAHAPSSQVAQINCGHCRTTLMY 104
Query: 549 PYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPGSMPPSTSTQSTPPFQTQTVV 728
PYGA SV+CAVCQFVTNVNM NGRVP PTN PNGT + PPSTST STPP QTQTVV
Sbjct: 105 PYGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGT-----ACPPSTST-STPPSQTQTVV 158
Query: 729 VENPMSVNESGKLVSNVVVGVTTEK 803
VENPMSV+ESGKLVSNVVVGVTT+K
Sbjct: 159 VENPMSVDESGKLVSNVVVGVTTDK 183
>TAIR9_protein||AT4G20380.6 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 185
Score = 303 bits (775), Expect = 1e-082
Identities = 155/205 (75%), Positives = 166/205 (80%), Gaps = 30/205 (14%)
Frame = +3
Query: 213 MQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHHAHVGMDMAHIVC 392
MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMAHI+C
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH--------DMAHIIC 48
Query: 393 GGCRTMLMYTRGANSVRCSCCQTVNLVPATPPAHANQPAH--------ISCGNCRTTLMY 548
GGCRTMLMYTRGA+SVRCSCCQT NLV PAH+NQ AH I+CG+CRTTLMY
Sbjct: 49 GGCRTMLMYTRGASSVRCSCCQTTNLV----PAHSNQVAHAPSSQVAQINCGHCRTTLMY 104
Query: 549 PYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPGSMPPSTSTQSTPPFQTQTVV 728
PYGA SV+CAVCQFVTNVNM NGRVP PTN PNGT + PPSTST STPP QTQTVV
Sbjct: 105 PYGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGT-----ACPPSTST-STPPSQTQTVV 158
Query: 729 VENPMSVNESGKLVSNVVVGVTTEK 803
VENPMSV+ESGKLVSNVVVGVTT+K
Sbjct: 159 VENPMSVDESGKLVSNVVVGVTTDK 183
>TAIR9_protein||AT4G20380.8 | Symbols: | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 211
Score = 156 bits (394), Expect = 2e-038
Identities = 80/102 (78%), Positives = 87/102 (85%), Gaps = 6/102 (5%)
Frame = +3
Query: 489 AHANQPAHISCGNCRTTLMYPYGAPSVRCAVCQFVTNVNMGNGRVPFPTNLPNGTTAAPG 668
A ++Q A I+CG+CRTTLMYPYGA SV+CAVCQFVTNVNM NGRVP PTN PNGT
Sbjct: 111 APSSQVAQINCGHCRTTLMYPYGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGT----- 165
Query: 669 SMPPSTSTQSTPPFQTQTVVVENPMSVNESGKLVSNVVVGVT 794
+ PPSTST STPP QTQTVVVENPMSV+ESGKLVSNVVVGVT
Sbjct: 166 ACPPSTST-STPPSQTQTVVVENPMSVDESGKLVSNVVVGVT 206
Score = 151 bits (380), Expect = 9e-037
Identities = 70/88 (79%), Positives = 74/88 (84%), Gaps = 12/88 (13%)
Frame = +3
Query: 213 MQDQLVCHGCRNTLVYPRGATNVRCALCNTINMVPLHPHPPPPPHHHHAHVGMDMAHIVC 392
MQDQLVCHGCRN L+YPRGA+NVRCALCNTINMVP PPPPPH DMAHI+C
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP----PPPPPH--------DMAHIIC 48
Query: 393 GGCRTMLMYTRGANSVRCSCCQTVNLVP 476
GGCRTMLMYTRGA+SVRCSCCQT NLVP
Sbjct: 49 GGCRTMLMYTRGASSVRCSCCQTTNLVP 76
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,064,290,501
Number of Sequences: 33410
Number of Extensions: 20064290501
Number of Successful Extensions: 642127729
Number of sequences better than 0.0: 0
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