Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN40440


BLASTX 7.6.2

Query= UN40440 /QuerySize=991
        (990 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|297833258|ref|XP_002884511.1| predicted protein [Arabidopsis ...    248   1e-063
gi|297833262|ref|XP_002884513.1| predicted protein [Arabidopsis ...    205   9e-051
gi|297796199|ref|XP_002865984.1| hypothetical protein ARALYDRAFT...    134   3e-029
gi|297808537|ref|XP_002872152.1| hypothetical protein ARALYDRAFT...    132   8e-029
gi|7596766|gb|AAF64537.1| hypothetical protein [Arabidopsis thal...    105   1e-020
gi|240255286|ref|NP_187196.4| uncharacterized protein [Arabidops...    104   3e-020
gi|297789193|ref|XP_002862588.1| hypothetical protein ARALYDRAFT...     97   4e-018
gi|297847194|ref|XP_002891478.1| hypothetical protein ARALYDRAFT...     83   7e-014

>gi|297833258|ref|XP_002884511.1| predicted protein [Arabidopsis lyrata subsp.
        lyrata]

          Length = 473

 Score =  248 bits (632), Expect = 1e-063
 Identities = 134/238 (56%), Positives = 167/238 (70%), Gaps = 16/238 (6%)
 Frame = +3

Query:  87 SSDGEKKEESSIE---TEPMETSTGVDTSLLGKLKLEETQDQESSGEEEVDGDEEEDEVE 257
           SS G+ K+ SS +   TE ME STG ++S+LGK K+E T  ++ +   E +GD E  + E
Sbjct: 237 SSAGDTKDGSSSKTQSTESMEISTGDESSMLGKRKVETTNLEDLN---ENEGDVEGVDEE 293

Query: 258 EEEEEGSDFYWEKDSFDGREYHSSDD-SEYSDEDLGEKARYYYRTVIETKGFFESSNKLP 434
           E  E  SD  W+KDSFDG EY SSDD  EY D+DL ++AR+Y RTVIETKGFFE++++ P
Sbjct: 294 ENSESDSDSEWDKDSFDGLEYRSSDDQKEYIDKDLEKRARFYKRTVIETKGFFEATDEFP 353

Query: 435 MYLWSGIGVVSKRDLD-----TSREFIGNMVSECVEKHNRRNNKNVRFEHLLRANFDPGA 599
            YLW+GI  V   D D     T R+F+ NM S C++K+N+R   NV+ EH+LRANF+PG 
Sbjct: 354 PYLWAGIATVPGLDDDLEEGLTVRQFLANMTSLCLDKYNKRKGFNVKLEHVLRANFNPGG 413

Query: 600 KTKYYITFAAKESDSPDAPLVEYQAKVVWSAGVTYPIFCRPAPPPKQG*GNVYSFQLS 773
           +T YYITFAA+ESDSPDAPLVEYQAKV WSAG TYPI CRP  PPK G     SF LS
Sbjct: 414 RTTYYITFAARESDSPDAPLVEYQAKVDWSAGKTYPILCRPTSPPKLG----NSFHLS 467


 Score =  191 bits (485), Expect = 1e-046
 Identities = 115/231 (49%), Positives = 147/231 (63%), Gaps = 22/231 (9%)
 Frame = +3

Query:  75 MDTKSSDGEKKEESSIET---EPMETSTGVDTSLLGKLKLEETQDQESSGEEEVDGDEEE 245
           M  K S+ E K+ SS ET   E ME STG D+SLLGK K+E T + E  GE E   D+E+
Sbjct:   1 MAPKPSESETKDGSSSETQSAEAMEISTGDDSSLLGKRKVEAT-NLEDPGENEEGVDDED 59

Query: 246 DEVEEEEEEGSDFYWEKDSFDGREYHSSDDS-EYSDEDLGEKARYYYRTVIETKGFFESS 422
              EE+++  SD  W+KDSFDGREYHSSDD  EY D+DL ++AR+Y RTVIETKGFFE+S
Sbjct:  60 VIDEEDKDSDSDPEWDKDSFDGREYHSSDDEREYIDKDLEKRARFYKRTVIETKGFFETS 119

Query: 423 NKLPMYLWSGIGVVSKRDLD-----TSREFIGNM-VSECVEKHNRRNNKNVRFEHLLRAN 584
           +KLP  ++ G+G +   D       T+RE    +  S C++++N    K           
Sbjct: 120 DKLPPCVYYGVGSLGYLDEPAMLGLTTREVCEKLTTSLCLQRYNEEEGKLQTI------- 172

Query: 585 FDPGAKTKYYITFAAKESDSPDAPLVEYQAKVVWS-AGVTYPIFCRPAPPP 734
               + TK+YITFAA+ES+SPDAPLVEYQAK VWS     YPI CRP+P P
Sbjct: 173 ---WSMTKFYITFAARESESPDAPLVEYQAKAVWSVTHKIYPILCRPSPAP 220

>gi|297833262|ref|XP_002884513.1| predicted protein [Arabidopsis lyrata subsp.
        lyrata]

          Length = 427

 Score =  205 bits (521), Expect = 9e-051
 Identities = 113/225 (50%), Positives = 142/225 (63%), Gaps = 15/225 (6%)
 Frame = +3

Query: 105 KEESSIETEPMETSTGVDTSLLGKLKLEETQDQESSGEE-EVDGDEEE--------DEVE 257
           KE  S +   +E    + T  +     +E +D+E   +  EVDGD EE        ++V 
Sbjct: 193 KEFESPDAPLLEYQAKMVTKSIDSHVQDEREDKEGDDDSVEVDGDSEESYTSGVGDEKVH 252

Query: 258 EEEEEGSDFYWEKDSFDGREYHSSDDS-EYSDEDLGEKARYYYRTVIETKGFFESSNKLP 434
           E +E   +  W+KDSFDGREYHSSDD  EY D+D   +AR+Y RTVIETKGFFE++++  
Sbjct: 253 EYQEVTDEPEWDKDSFDGREYHSSDDQREYEDKDFERRARFYRRTVIETKGFFEATDEFL 312

Query: 435 MYLWSGIGVVSKRDLDTSREFIGNMVSECVEKHNRRNNKNVRFEHLLRANFDPGAKTKYY 614
            YLW+GI  V   D D      G  V + +   N  +  NV+ +H+LRANFDPG +T YY
Sbjct: 313 PYLWAGIATVPGLDDDLEE---GLTVRQFLA--NMTSGFNVKLDHVLRANFDPGGRTTYY 367

Query: 615 ITFAAKESDSPDAPLVEYQAKVVWSAGVTYPIFCRPAPPPKQG*G 749
           ITF A+ESDSPDAPLVEYQAKVVWSAG TYPI CRP  PPK G G
Sbjct: 368 ITFVARESDSPDAPLVEYQAKVVWSAGKTYPILCRPTSPPKMGDG 412


 Score =  156 bits (394), Expect = 5e-036
 Identities = 86/192 (44%), Positives = 120/192 (62%), Gaps = 7/192 (3%)
 Frame = +3

Query: 126 TEPME-TSTGVDTSLLGKLKLEETQDQESSGEEEVDGDEEEDEVEEEEEEGSDFYWEKDS 302
           TEPME TS  VD   LG+ K E +  +E    +    D+++   EEE+   S+  W+KDS
Sbjct:  20 TEPMETTSPSVDLWSLGQRKAEISDPEEEDSSDSESEDDDDSSEEEEKNSDSEPEWDKDS 79

Query: 303 FDGREYHSSDDSEYSDEDLGEKARYYYRTVIETKGFFESSNKLPMYLWSGIGVVSKR--- 473
           FDGREYH SD+ E SD++   K R Y R +IETKGFF     +P  L+SGI  ++     
Sbjct:  80 FDGREYH-SDEKELSDKEADLKWRRYERQLIETKGFFVEPENIPPCLYSGIAPLTNLEGP 138

Query: 474 --DLDTSREFIGNMVSECVEKHNRRNNKNVRFEHLLRANFDPGAKTKYYITFAAKESDSP 647
             D  T+REF  ++ + C++K N++   NV+FE +L  NF  G++  Y+ITF AKE +SP
Sbjct: 139 SVDGLTTREFCTDLATACLDKLNQQQGSNVKFEDVLWVNFRGGSRPVYFITFVAKEFESP 198

Query: 648 DAPLVEYQAKVV 683
           DAPL+EYQAK+V
Sbjct: 199 DAPLLEYQAKMV 210

>gi|297796199|ref|XP_002865984.1| hypothetical protein ARALYDRAFT_357611
        [Arabidopsis lyrata subsp. lyrata]

          Length = 225

 Score =  134 bits (336), Expect = 3e-029
 Identities = 61/98 (62%), Positives = 75/98 (76%)
 Frame = +3

Query: 483 TSREFIGNMVSECVEKHNRRNNKNVRFEHLLRANFDPGAKTKYYITFAAKESDSPDAPLV 662
           T R+F+ NM S C++K+N+R   NV+ EH+LRANF+PG +T YYITFAA+ESDSPDAPLV
Sbjct: 116 TVRQFLANMTSLCLDKYNKRKGFNVKLEHVLRANFNPGGRTTYYITFAARESDSPDAPLV 175

Query: 663 EYQAKVVWSAGVTYPIFCRPAPPPKQG*GNVYSFQLSL 776
           EYQ KV WSAG TYPI CRP  PPK    N+Y  ++ L
Sbjct: 176 EYQVKVDWSAGNTYPILCRPTSPPKLVEDNMYEIRMVL 213

>gi|297808537|ref|XP_002872152.1| hypothetical protein ARALYDRAFT_351540
        [Arabidopsis lyrata subsp. lyrata]

          Length = 226

 Score =  132 bits (332), Expect = 8e-029
 Identities = 60/98 (61%), Positives = 75/98 (76%)
 Frame = +3

Query: 483 TSREFIGNMVSECVEKHNRRNNKNVRFEHLLRANFDPGAKTKYYITFAAKESDSPDAPLV 662
           T R+F+ NM S C++K+N+R   NV+ EH+LRANF+PG +T YYITFAA+ESDSPDAPLV
Sbjct: 116 TVRQFLANMTSLCLDKYNKRKGFNVKLEHVLRANFNPGGRTTYYITFAARESDSPDAPLV 175

Query: 663 EYQAKVVWSAGVTYPIFCRPAPPPKQG*GNVYSFQLSL 776
           EYQ KV WSAG TYPI CRP  PP+    N+Y  ++ L
Sbjct: 176 EYQVKVDWSAGNTYPILCRPTSPPQLVEDNMYEIRMVL 213

>gi|7596766|gb|AAF64537.1| hypothetical protein [Arabidopsis thaliana]

          Length = 433

 Score =  105 bits (261), Expect = 1e-020
 Identities = 49/70 (70%), Positives = 57/70 (81%), Gaps = 3/70 (4%)
 Frame = +3

Query: 552 NVRFEHLLRANFDPGAKTKYYITFAAKESDSPDAPLVEYQAKVVWSAGVTYPIFCRPAPP 731
           NV+ +H+LRANF+PG +T YYITFAA+ESDSPDAPLVEYQAKV WSAG TYPI CRP  P
Sbjct: 361 NVKLDHVLRANFNPGGRTTYYITFAARESDSPDAPLVEYQAKVDWSAGKTYPILCRPTSP 420

Query: 732 PKQG*GNVYS 761
                GN++S
Sbjct: 421 KL---GNLFS 427


 Score =  91 bits (225), Expect = 2e-016
 Identities = 41/59 (69%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
 Frame = +3

Query: 552 NVRFEHLLRANFDPGAKTKYYITFAAKESDSPDAPLVEYQAKVVWSAG-VTYPIFCRPA 725
           NV+ EH+LRAN++PG+ +K+YITFAA+ESDSPDAP  EYQAK  WSA   TYPIFCRP+
Sbjct: 142 NVKLEHILRANYNPGSMSKFYITFAARESDSPDAPSEEYQAKAAWSAAEKTYPIFCRPS 200

>gi|240255286|ref|NP_187196.4| uncharacterized protein [Arabidopsis thaliana]

          Length = 440

 Score =  104 bits (258), Expect = 3e-020
 Identities = 46/60 (76%), Positives = 52/60 (86%)
 Frame = +3

Query: 552 NVRFEHLLRANFDPGAKTKYYITFAAKESDSPDAPLVEYQAKVVWSAGVTYPIFCRPAPP 731
           NV+ +H+LRANF+PG +T YYITFAA+ESDSPDAPLVEYQAKV WSAG TYPI CRP  P
Sbjct: 361 NVKLDHVLRANFNPGGRTTYYITFAARESDSPDAPLVEYQAKVDWSAGKTYPILCRPTSP 420


 Score =  91 bits (225), Expect = 2e-016
 Identities = 41/59 (69%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
 Frame = +3

Query: 552 NVRFEHLLRANFDPGAKTKYYITFAAKESDSPDAPLVEYQAKVVWSAG-VTYPIFCRPA 725
           NV+ EH+LRAN++PG+ +K+YITFAA+ESDSPDAP  EYQAK  WSA   TYPIFCRP+
Sbjct: 142 NVKLEHILRANYNPGSMSKFYITFAARESDSPDAPSEEYQAKAAWSAAEKTYPIFCRPS 200

>gi|297789193|ref|XP_002862588.1| hypothetical protein ARALYDRAFT_920513
        [Arabidopsis lyrata subsp. lyrata]

          Length = 256

 Score =  97 bits (240), Expect = 4e-018
 Identities = 44/66 (66%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
 Frame = +3

Query: 540 RNNKNVRFEHLLRANFDPGAKTKYYITFAAKESDSPDAPLVEYQAKVVWS-AGVTYPIFC 716
           R  KNV+ EH+LRAN++PG+ TK+YITFAA+E +SPDAPLVEYQAK VWS     YPI C
Sbjct: 117 REEKNVKMEHILRANYNPGSMTKFYITFAAREFESPDAPLVEYQAKAVWSVTHKIYPILC 176

Query: 717 RPAPPP 734
           RP+P P
Sbjct: 177 RPSPAP 182


 Score =  64 bits (153), Expect = 4e-008
 Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
 Frame = +3

Query: 294 KDSFDGREYHSSDDSEYSDEDLGEKARYYYRTVIETKGFFESSNKLPMYLWSGIGVVSKR 473
           +  F+GRE  S++  EYSD++  E+ R+Y R +IETKGFFE+S+K P Y++S  GV S  
Sbjct:  47 ESDFEGREDDSANLREYSDKEFEEQCRHYKRKLIETKGFFETSDKFPPYVYS--GVASLG 104

Query: 474 DLD 482
           DLD
Sbjct: 105 DLD 107

>gi|297847194|ref|XP_002891478.1| hypothetical protein ARALYDRAFT_337039
        [Arabidopsis lyrata subsp. lyrata]

          Length = 127

 Score =  83 bits (203), Expect = 7e-014
 Identities = 42/80 (52%), Positives = 57/80 (71%), Gaps = 2/80 (2%)
 Frame = +3

Query: 228 DGDEEEDEVEEEEEEGSDFYWEKDSFDGREYHSSDD-SEYSDEDLGEKARYYYRTVIETK 404
           D  E E ++E  +++ SD  W+KDSFDG EYHS DD  EY D+   ++AR+Y RTVIETK
Sbjct:  47 DLSENEGDIEGVDDD-SDSEWDKDSFDGLEYHSWDDQKEYIDKYFEKRARFYKRTVIETK 105

Query: 405 GFFESSNKLPMYLWSGIGVV 464
           GFFE++++ P YL +GI  V
Sbjct: 106 GFFEATDEFPPYLLAGIATV 125

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,486,047,059,872
Number of Sequences: 15229318
Number of Extensions: 4486047059872
Number of Successful Extensions: 1052332685
Number of sequences better than 0.0: 0