BLASTX 7.6.2
Query= UN40563 /QuerySize=1621
(1620 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9ZT42|RHF2A_ARATH E3 ubiquitin-protein ligase RHF2A OS=Arabi... 599 3e-170
sp|Q4TU14|RHF1A_ARATH E3 ubiquitin-protein ligase RHF1A OS=Arabi... 119 7e-026
sp|Q9VE61|RN181_DROME E3 ubiquitin-protein ligase CG7694 OS=Dros... 58 2e-007
sp|Q68DV7|RNF43_HUMAN RING finger protein 43 OS=Homo sapiens GN=... 54 2e-006
>sp|Q9ZT42|RHF2A_ARATH E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana
GN=RHF2A PE=2 SV=1
Length = 375
Score = 599 bits (1542), Expect = 3e-170
Identities = 318/387 (82%), Positives = 334/387 (86%), Gaps = 25/387 (6%)
Frame = +2
Query: 185 MEGVEDTTSSEGHMISAAAFVQGGIQDACDDACSICLESFCESEPSTLTSCKHEYHLQCI 364
MEG +TT+SEGH+ SAAAFV+GGIQDACDDACSICLESFCES+PSTLTSCKHEYHLQCI
Sbjct: 1 MEGAGETTTSEGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCI 60
Query: 365 LEWCQRSSQCPMCWQSISLKDPTSQELLEAVVQERNFRINPPRNATIFRHPTLGDFELQH 544
LEWCQRSSQCPMCWQSISLKDPTSQELLEAV QERNFR NP RNATIFRHPTLGDFELQH
Sbjct: 61 LEWCQRSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFELQH 120
Query: 545 LPVGVDNAEIEERIIQHL--AAAMGRVRHGARREGHRSRSSTQGGHPQYMVYSQHP---P 709
LPVGVDNAEIEERIIQHL AAAMGR RHG RREGHRSRSS+Q GH Q+MV+S P
Sbjct: 121 LPVGVDNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQ-GHQQFMVFSSQPNASS 179
Query: 710 PPPPPPMPSSPSQRDEGDIATNLPHNATFGEGS----LQPPASSHPRQVSP----SNGRY 865
PPP PPMPSSPSQRDE D +NLPHNA GEGS QPP SSHPRQVSP SN R
Sbjct: 180 PPPHPPMPSSPSQRDESDTVSNLPHNA-LGEGSHQSNTQPPTSSHPRQVSPSASDSNSRP 238
Query: 866 LNQSSPSDQDRAGPSELQSFSESLKSRLSAVSTRYKESISKNTRNWKDRFFSRNTSMAEL 1045
LNQSSPS+QDRAGPSELQSFSESLKSRL+AVSTRYKESISKNTRNWKDR FSRNTSMA+L
Sbjct: 239 LNQSSPSEQDRAGPSELQSFSESLKSRLNAVSTRYKESISKNTRNWKDRLFSRNTSMADL 298
Query: 1046 GSEVKREVSAGIATVSRMMERLETRENSSSSTSSRPGTASVSSNGSENQNTPVEANNEHN 1225
GSEVKREVSAGIATVSRMMERLETREN SRP TASV S+ SEN +TP E NNEHN
Sbjct: 299 GSEVKREVSAGIATVSRMMERLETREN------SRPSTASV-SDVSEN-HTP-ETNNEHN 349
Query: 1226 RRSEAGDEHSLNERGVKGTCATGPGSS 1306
R+ AGDEHS+NERGVK TCATG GSS
Sbjct: 350 -RAAAGDEHSVNERGVKETCATGSGSS 375
>sp|Q4TU14|RHF1A_ARATH E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana
GN=RHF1A PE=1 SV=1
Length = 371
Score = 119 bits (297), Expect = 7e-026
Identities = 66/151 (43%), Positives = 86/151 (56%), Gaps = 3/151 (1%)
Frame = +2
Query: 230 SAAAFVQGGIQDACDDACSICLESFCESEPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQ 409
S+A V + DDACSICLE F +PST+TSCKHEYHLQCI+EW QRS +CP+CWQ
Sbjct: 29 SSALVVASDDDNNTDDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICWQ 88
Query: 410 SISLKDPTSQELLEAVVQERNFRI-NPPRNATIFRHPTLGDFELQHLPVGVDNAEIEERI 586
L+DP SQELL AV +ER + N ++ I H + DF + + +E+
Sbjct: 89 LFVLRDPASQELLAAVEKERLLKTRNISSSSPISIHHSHDDFHSEE--EESQFSSFDEQF 146
Query: 587 IQHLAAAMGRVRHGARREGHRSRSSTQGGHP 679
++HL A R RR+G S S P
Sbjct: 147 LRHLTEAAHRRCLLRRRDGQISSSLVSSSDP 177
Score = 84 bits (205), Expect = 3e-015
Identities = 56/157 (35%), Positives = 86/157 (54%), Gaps = 5/157 (3%)
Frame = +2
Query: 803 GSLQP-PASSHPRQVSPSN--GRYLNQSSPSDQDRAGPS-ELQSFSESLKSRLSAVSTRY 970
GS+ P P S H + SN R SPS ++ S E S E++KS+L+A S +Y
Sbjct: 209 GSMTPSPVSGHSSIPADSNNGSRISPGPSPSRSSQSPKSPEASSLPEAIKSKLAAASAKY 268
Query: 971 KESISKNTRNWKDRFFSRNTSMAELGSEVKREVSAGIATVSRMMERLE-TRENSSSSTSS 1147
KESISK+ + K++ +RN S+ EL V+RE++AGIA V+RM+ER++ + + S
Sbjct: 269 KESISKSKQGLKEKLLARNNSVKELSKGVQREMNAGIAGVARMIERMDFSSKRFGGSAHV 328
Query: 1148 RPGTASVSSNGSENQNTPVEANNEHNRRSEAGDEHSL 1258
TA+ S + VEAN++ N + + L
Sbjct: 329 STSTATASGFNFSFKGKRVEANSKSNNNGDKTEPQKL 365
>sp|Q9VE61|RN181_DROME E3 ubiquitin-protein ligase CG7694 OS=Drosophila
melanogaster GN=CG7694 PE=2 SV=1
Length = 147
Score = 58 bits (139), Expect = 2e-007
Identities = 25/69 (36%), Positives = 37/69 (53%)
Frame = +2
Query: 272 DDACSICLESFCESEPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSISLKDPTSQELLE 451
D CS+C E E + + CKHE+H +CIL W ++++ CP+C + DP +EL
Sbjct: 67 DLECSVCKEPAEEGQKYRILPCKHEFHEECILLWLKKTNSCPLCRYELETDDPVYEELRR 126
Query: 452 AVVQERNFR 478
E N R
Sbjct: 127 FRQDEANRR 135
>sp|Q68DV7|RNF43_HUMAN RING finger protein 43 OS=Homo sapiens GN=RNF43 PE=1
SV=1
Length = 783
Score = 54 bits (129), Expect = 2e-006
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 266 ACDDA--CSICLESFCESEPSTLTSCKHEYHLQCILEWCQRSSQCPMCWQSISLKDPTSQ 439
+C A C+ICLE F E + + SC HE+H C+ W + CP+C +I+ D SQ
Sbjct: 265 SCSSAPVCAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNITEGDSFSQ 324
Query: 440 EL 445
L
Sbjct: 325 SL 326
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155,740,548,379
Number of Sequences: 518415
Number of Extensions: 155740548379
Number of Successful Extensions: 952083542
Number of sequences better than 0.0: 0
|