BLASTX 7.6.2
Query= UN40569 /QuerySize=782
(781 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15227862|ref|NP_179347.1| high mobility group B4 protein [Ara... 155 9e-036
gi|145328748|ref|NP_001077909.1| high mobility group B4 protein ... 155 9e-036
gi|2832355|emb|CAA74403.1| HMG protein [Arabidopsis thaliana] 154 1e-035
gi|297836478|ref|XP_002886121.1| hypothetical protein ARALYDRAFT... 154 1e-035
gi|21592453|gb|AAM64404.1| putative HMG protein [Arabidopsis tha... 154 2e-035
gi|13877775|gb|AAK43965.1|AF370150_1 putative HMG protein [Arabi... 153 3e-035
gi|297798364|ref|XP_002867066.1| predicted protein [Arabidopsis ... 141 1e-031
gi|15237040|ref|NP_195282.1| high mobility group B5 protein [Ara... 136 3e-030
gi|309243128|gb|ADD74180.2| high mobility group box 3 protein [G... 119 8e-025
gi|63020536|gb|AAY26151.1| high mobility group protein [Cucumis ... 117 2e-024
gi|339716048|gb|AEJ88271.1| putative HMG DNA-binding protein [Wo... 112 9e-023
gi|1052956|gb|AAC50019.1| high mobility group protein 2 HMG2 [Ip... 110 3e-022
gi|436424|emb|CAA54168.1| HMG 1 protein [Pisum sativum] 110 3e-022
gi|308569658|gb|ADO34794.1| high mobility group box 4 protein [G... 110 3e-022
gi|729736|sp|P40619.1|HMGL_IPONI RecName: Full=HMG1/2-like protein 109 6e-022
gi|116790306|gb|ABK25570.1| unknown [Picea sitchensis] 106 4e-021
gi|295913526|gb|ADG58011.1| transcription factor [Lycoris longit... 104 2e-020
gi|295913700|gb|ADG58091.1| transcription factor [Lycoris longit... 104 2e-020
gi|295913708|gb|ADG58095.1| transcription factor [Lycoris longit... 104 2e-020
gi|148250187|gb|ABQ53545.1| HMG1 protein [Arachis diogoi] 104 2e-020
>gi|15227862|ref|NP_179347.1| high mobility group B4 protein [Arabidopsis
thaliana]
Length = 138
Score = 155 bits (390), Expect = 9e-036
Identities = 74/93 (79%), Positives = 85/93 (91%), Gaps = 1/93 (1%)
Frame = -1
Query: 673 MKGGETKAQAKSTDERLKTRGKKAGKKV-KDPNKPKRPPSAFFVFLEGFRKEFNLANPNN 497
MKGGE+KA+A STD+RLKTRG+KAGKK KDPN+PKRPPSAFFVFLE FRKEFNLANPNN
Sbjct: 1 MKGGESKAEATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNN 60
Query: 496 KSVGAVGKAAGAKWKSMTADDKAPYVEKAETKR 398
KSV VGKAAGA+WK+MT +DKAPYV KAE+++
Sbjct: 61 KSVATVGKAAGARWKAMTDEDKAPYVAKAESRK 93
>gi|145328748|ref|NP_001077909.1| high mobility group B4 protein [Arabidopsis
thaliana]
Length = 134
Score = 155 bits (390), Expect = 9e-036
Identities = 74/93 (79%), Positives = 85/93 (91%), Gaps = 1/93 (1%)
Frame = -1
Query: 673 MKGGETKAQAKSTDERLKTRGKKAGKKV-KDPNKPKRPPSAFFVFLEGFRKEFNLANPNN 497
MKGGE+KA+A STD+RLKTRG+KAGKK KDPN+PKRPPSAFFVFLE FRKEFNLANPNN
Sbjct: 1 MKGGESKAEATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNN 60
Query: 496 KSVGAVGKAAGAKWKSMTADDKAPYVEKAETKR 398
KSV VGKAAGA+WK+MT +DKAPYV KAE+++
Sbjct: 61 KSVATVGKAAGARWKAMTDEDKAPYVAKAESRK 93
>gi|2832355|emb|CAA74403.1| HMG protein [Arabidopsis thaliana]
Length = 138
Score = 154 bits (389), Expect = 1e-035
Identities = 75/93 (80%), Positives = 84/93 (90%), Gaps = 1/93 (1%)
Frame = -1
Query: 673 MKGGETKAQAKSTDERLKTRGKKAGKKV-KDPNKPKRPPSAFFVFLEGFRKEFNLANPNN 497
MKGGE+KA A STD+RLKTRG+KAGKK KDPN+PKRPPSAFFVFLE FRKEFNLANPNN
Sbjct: 1 MKGGESKAGATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNN 60
Query: 496 KSVGAVGKAAGAKWKSMTADDKAPYVEKAETKR 398
KSV VGKAAGA+WKSMT +DKAPYV KAE+++
Sbjct: 61 KSVATVGKAAGARWKSMTDEDKAPYVAKAESRK 93
>gi|297836478|ref|XP_002886121.1| hypothetical protein ARALYDRAFT_480649
[Arabidopsis lyrata subsp. lyrata]
Length = 143
Score = 154 bits (389), Expect = 1e-035
Identities = 74/93 (79%), Positives = 84/93 (90%), Gaps = 1/93 (1%)
Frame = -1
Query: 673 MKGGETKAQAKSTDERLKTRGKKAGKKV-KDPNKPKRPPSAFFVFLEGFRKEFNLANPNN 497
MKGGE+KA+A STD+RLKTRG+K GKK KDPN+PKRPPSAFFVFLE FRKEFNLANPNN
Sbjct: 1 MKGGESKAEATSTDQRLKTRGRKPGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNN 60
Query: 496 KSVGAVGKAAGAKWKSMTADDKAPYVEKAETKR 398
KSV VGKAAGA+WKSMT +DKAPYV KAE+++
Sbjct: 61 KSVATVGKAAGARWKSMTEEDKAPYVAKAESRK 93
>gi|21592453|gb|AAM64404.1| putative HMG protein [Arabidopsis thaliana]
Length = 138
Score = 154 bits (388), Expect = 2e-035
Identities = 74/93 (79%), Positives = 84/93 (90%), Gaps = 1/93 (1%)
Frame = -1
Query: 673 MKGGETKAQAKSTDERLKTRGKKAGKKV-KDPNKPKRPPSAFFVFLEGFRKEFNLANPNN 497
MKGGE+KA+A STD+RLKTRG+KAG K KDPN+PKRPPSAFFVFLE FRKEFNLANPNN
Sbjct: 1 MKGGESKAEATSTDQRLKTRGRKAGNKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNN 60
Query: 496 KSVGAVGKAAGAKWKSMTADDKAPYVEKAETKR 398
KSV VGKAAGA+WKSMT +DKAPYV KAE+++
Sbjct: 61 KSVATVGKAAGARWKSMTDEDKAPYVAKAESRK 93
>gi|13877775|gb|AAK43965.1|AF370150_1 putative HMG protein [Arabidopsis
thaliana]
Length = 138
Score = 153 bits (386), Expect = 3e-035
Identities = 74/91 (81%), Positives = 83/91 (91%), Gaps = 1/91 (1%)
Frame = -1
Query: 673 MKGGETKAQAKSTDERLKTRGKKAGKKV-KDPNKPKRPPSAFFVFLEGFRKEFNLANPNN 497
MKGGE+KA+A STD+RLKTRG+KAGKK KDPN+PKRPPSAFFVFLE FRKEFNLANPNN
Sbjct: 1 MKGGESKAEATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNN 60
Query: 496 KSVGAVGKAAGAKWKSMTADDKAPYVEKAET 404
KSV VGKAAGA+WK+MT +DKAPYV KAE+
Sbjct: 61 KSVATVGKAAGARWKAMTDEDKAPYVAKAES 91
>gi|297798364|ref|XP_002867066.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 125
Score = 141 bits (354), Expect = 1e-031
Identities = 63/92 (68%), Positives = 79/92 (85%)
Frame = -1
Query: 673 MKGGETKAQAKSTDERLKTRGKKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNK 494
MK +T+ +++STD+RLK RG K GKK KDPNKPK+PPS FFVFL+ FR+EFNLANP+NK
Sbjct: 1 MKDNQTEVESRSTDDRLKVRGNKGGKKTKDPNKPKKPPSPFFVFLDDFRREFNLANPDNK 60
Query: 493 SVGAVGKAAGAKWKSMTADDKAPYVEKAETKR 398
SV +VGKAAG KWKSMT +DKAP+V KA++K+
Sbjct: 61 SVASVGKAAGKKWKSMTEEDKAPFVAKAKSKK 92
>gi|15237040|ref|NP_195282.1| high mobility group B5 protein [Arabidopsis
thaliana]
Length = 125
Score = 136 bits (342), Expect = 3e-030
Identities = 59/92 (64%), Positives = 79/92 (85%)
Frame = -1
Query: 673 MKGGETKAQAKSTDERLKTRGKKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNK 494
MK +T+ +++STD+RLK RG K GKK KDPN+PK+PPS FFVFL+ FRKEFNLANP+NK
Sbjct: 1 MKDNQTEVESRSTDDRLKVRGNKVGKKTKDPNRPKKPPSPFFVFLDDFRKEFNLANPDNK 60
Query: 493 SVGAVGKAAGAKWKSMTADDKAPYVEKAETKR 398
SVG VG+AAG KWK+MT +++AP+V K+++K+
Sbjct: 61 SVGNVGRAAGKKWKTMTEEERAPFVAKSQSKK 92
>gi|309243128|gb|ADD74180.2| high mobility group box 3 protein [Gossypium
hirsutum]
Length = 139
Score = 119 bits (296), Expect = 8e-025
Identities = 57/96 (59%), Positives = 72/96 (75%), Gaps = 4/96 (4%)
Frame = -1
Query: 673 MKGGETKAQAKSTDERLKTRGKKAGKK----VKDPNKPKRPPSAFFVFLEGFRKEFNLAN 506
MKGG+TK+ + +LK +G AGK+ KDPNKPKRP SAFFVF+E FRK++ AN
Sbjct: 1 MKGGQTKSDSMQAGNKLKGKGAGAGKRAKKAAKDPNKPKRPASAFFVFMEEFRKQYKEAN 60
Query: 505 PNNKSVGAVGKAAGAKWKSMTADDKAPYVEKAETKR 398
P+N+SV AVGKA G KWKSMT +KAPYV+KAE ++
Sbjct: 61 PDNRSVSAVGKAGGEKWKSMTDAEKAPYVQKAEKRK 96
>gi|63020536|gb|AAY26151.1| high mobility group protein [Cucumis sativus]
Length = 146
Score = 117 bits (293), Expect = 2e-024
Identities = 56/96 (58%), Positives = 71/96 (73%), Gaps = 4/96 (4%)
Frame = -1
Query: 673 MKGGETKAQAKSTDERLKTR----GKKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLAN 506
MKGG++K K TD +LK++ KK+ K KDPNKPKRP SAFFVF+E FRK++ +
Sbjct: 1 MKGGKSKGAPKKTDTKLKSKSAGASKKSAKAAKDPNKPKRPASAFFVFMEEFRKQYKKEH 60
Query: 505 PNNKSVGAVGKAAGAKWKSMTADDKAPYVEKAETKR 398
PNNKSV AVGKA G KWKSM+ +KAPY+ KAE ++
Sbjct: 61 PNNKSVAAVGKAGGDKWKSMSDAEKAPYINKAEKRK 96
>gi|339716048|gb|AEJ88271.1| putative HMG DNA-binding protein [Wolffia arrhiza]
Length = 148
Score = 112 bits (278), Expect = 9e-023
Identities = 57/99 (57%), Positives = 70/99 (70%), Gaps = 7/99 (7%)
Frame = -1
Query: 673 MKGG-ETKAQAKSTDERLKTRGK------KAGKKVKDPNKPKRPPSAFFVFLEGFRKEFN 515
MKGG ++K++ D RL + K K KK KDPNKPKR PSAFFVFLE FRKE+
Sbjct: 1 MKGGAKSKSEPTKADSRLSVKKKAPARAAKTAKKAKDPNKPKRAPSAFFVFLEEFRKEYK 60
Query: 514 LANPNNKSVGAVGKAAGAKWKSMTADDKAPYVEKAETKR 398
+P+NKSV AVGKAAGAKW+SM+ DKAPYV K+ ++
Sbjct: 61 EKHPDNKSVAAVGKAAGAKWRSMSDSDKAPYVNKSNKRK 99
>gi|1052956|gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil]
Length = 146
Score = 110 bits (273), Expect = 3e-022
Identities = 57/97 (58%), Positives = 72/97 (74%), Gaps = 8/97 (8%)
Frame = -1
Query: 673 MKGGETKAQAKSTDERL--KTRG---KKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLA 509
MKGG++KA+ +D +L K RG KK+ K VKDPNKPKRPPSAFFVF+E FRK +
Sbjct: 1 MKGGKSKAK---SDNKLAVKKRGCETKKSKKSVKDPNKPKRPPSAFFVFMEDFRKTYKEK 57
Query: 508 NPNNKSVGAVGKAAGAKWKSMTADDKAPYVEKAETKR 398
+PNNKSV AVGKA G KWK +T +KAP++ KAE ++
Sbjct: 58 HPNNKSVAAVGKAGGDKWKQLTDAEKAPFIAKAEKRK 94
>gi|436424|emb|CAA54168.1| HMG 1 protein [Pisum sativum]
Length = 154
Score = 110 bits (273), Expect = 3e-022
Identities = 57/104 (54%), Positives = 67/104 (64%), Gaps = 2/104 (1%)
Frame = -1
Query: 676 EMKGGETKAQAKSTDERLKTRGKK--AGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANP 503
E K ETK GKK GK+ KDPNKPKRPPSAFFVF+E FRK+F N
Sbjct: 9 ESKKAETKLAVNKKGAPATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMEDFRKQFKKGNA 68
Query: 502 NNKSVGAVGKAAGAKWKSMTADDKAPYVEKAETKRLNTPRLCKN 371
+NK+V AVGKAAGAKWKSMT +KAPY KAE ++ + K+
Sbjct: 69 DNKAVSAVGKAAGAKWKSMTEAEKAPYAAKAEKRKAEYEKSMKS 112
>gi|308569658|gb|ADO34794.1| high mobility group box 4 protein [Gossypium
hirsutum]
Length = 148
Score = 110 bits (273), Expect = 3e-022
Identities = 54/108 (50%), Positives = 74/108 (68%), Gaps = 5/108 (4%)
Frame = -1
Query: 673 MKGGETKAQAKSTDERLKTR-----GKKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLA 509
MKGG++K+ KS+ + + GKK+GK KDPNKPKRP SAFFVF+E FR+++
Sbjct: 1 MKGGKSKSDTKSSRLAVNKKSSAKAGKKSGKAAKDPNKPKRPASAFFVFMEEFREQYKKE 60
Query: 508 NPNNKSVGAVGKAAGAKWKSMTADDKAPYVEKAETKRLNTPRLCKNTT 365
+P NKSV AVGKA G KWKS++ +KAPY+ KAE +++ + K T
Sbjct: 61 HPKNKSVAAVGKAGGEKWKSLSDAEKAPYIAKAEKRKVEYEKNMKAYT 108
>gi|729736|sp|P40619.1|HMGL_IPONI RecName: Full=HMG1/2-like protein
Length = 144
Score = 109 bits (271), Expect = 6e-022
Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
Frame = -1
Query: 673 MKGGETKAQA--KSTDERLKTRGKKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPN 500
MKGG++KA++ K ++ KK K VKDPNKPKRPPSAFFVF+E FRK + +PN
Sbjct: 1 MKGGKSKAKSDNKLAVKKQAADTKKTKKAVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPN 60
Query: 499 NKSVGAVGKAAGAKWKSMTADDKAPYVEKAETKR 398
NKSV VGKA G KWK +TA +KAP++ KAE ++
Sbjct: 61 NKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRK 94
>gi|116790306|gb|ABK25570.1| unknown [Picea sitchensis]
Length = 151
Score = 106 bits (264), Expect = 4e-021
Identities = 51/88 (57%), Positives = 65/88 (73%)
Frame = -1
Query: 661 ETKAQAKSTDERLKTRGKKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNKSVGA 482
+T + +TD ++K + KK K KDPNKPKRPPSAFFVFL+ FRKE+ ANPN SV A
Sbjct: 17 KTGKRKPATDTQVKRQIKKEKKAKKDPNKPKRPPSAFFVFLDEFRKEYKQANPNANSVSA 76
Query: 481 VGKAAGAKWKSMTADDKAPYVEKAETKR 398
VGKA G KW++++ +KAPYV KAE K+
Sbjct: 77 VGKAGGEKWRALSDAEKAPYVAKAEKKK 104
>gi|295913526|gb|ADG58011.1| transcription factor [Lycoris longituba]
Length = 171
Score = 104 bits (258), Expect = 2e-020
Identities = 49/82 (59%), Positives = 60/82 (73%)
Frame = -1
Query: 643 KSTDERLKTRGKKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNKSVGAVGKAAG 464
K+ ++ +K K K+ KDPNKPKRPPSAFFVF+E FRK+F NPNNK V VGKAAG
Sbjct: 36 KAAEKPVKKPAVKKAKEGKDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAG 95
Query: 463 AKWKSMTADDKAPYVEKAETKR 398
KWKSM+A +KAPY KA ++
Sbjct: 96 DKWKSMSATEKAPYEAKAAKRK 117
>gi|295913700|gb|ADG58091.1| transcription factor [Lycoris longituba]
Length = 162
Score = 104 bits (258), Expect = 2e-020
Identities = 49/82 (59%), Positives = 60/82 (73%)
Frame = -1
Query: 643 KSTDERLKTRGKKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNKSVGAVGKAAG 464
K+ ++ +K K K+ KDPNKPKRPPSAFFVF+E FRK+F NPNNK V VGKAAG
Sbjct: 23 KAAEKPVKKPAVKKAKEGKDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAG 82
Query: 463 AKWKSMTADDKAPYVEKAETKR 398
KWKSM+A +KAPY KA ++
Sbjct: 83 DKWKSMSATEKAPYEAKAAKRK 104
>gi|295913708|gb|ADG58095.1| transcription factor [Lycoris longituba]
Length = 190
Score = 104 bits (258), Expect = 2e-020
Identities = 49/82 (59%), Positives = 60/82 (73%)
Frame = -1
Query: 643 KSTDERLKTRGKKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNKSVGAVGKAAG 464
K+ ++ +K K K+ KDPNKPKRPPSAFFVF+E FRK+F NPNNK V VGKAAG
Sbjct: 51 KAAEKPVKKPAVKKAKEGKDPNKPKRPPSAFFVFMEEFRKQFKEKNPNNKQVSVVGKAAG 110
Query: 463 AKWKSMTADDKAPYVEKAETKR 398
KWKSM+A +KAPY KA ++
Sbjct: 111 DKWKSMSATEKAPYEAKAAKRK 132
>gi|148250187|gb|ABQ53545.1| HMG1 protein [Arachis diogoi]
Length = 141
Score = 104 bits (258), Expect = 2e-020
Identities = 51/91 (56%), Positives = 62/91 (68%), Gaps = 2/91 (2%)
Frame = -1
Query: 664 GETKAQAKSTDERLKTRGKKA--GKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNKS 491
G+ K G+K GK KDPNKPKRPPSAFFVF+E FRK+FN +P NK+
Sbjct: 1 GDAKLAVNKKGTPAAKGGRKTGKGKAAKDPNKPKRPPSAFFVFMEEFRKQFNKDHPENKA 60
Query: 490 VGAVGKAAGAKWKSMTADDKAPYVEKAETKR 398
V AVGKAAGAKWK M+ +KAPYV K+E ++
Sbjct: 61 VSAVGKAAGAKWKQMSDAEKAPYVAKSEKRK 91
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,486,047,059,872
Number of Sequences: 15229318
Number of Extensions: 4486047059872
Number of Successful Extensions: 1052332685
Number of sequences better than 0.0: 0
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