BLASTX 7.6.2
Query= UN40569 /QuerySize=782
(781 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P40619|HMGL_IPONI HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1 109 3e-023
sp|P27347|MNB1B_MAIZE DNA-binding protein MNB1B OS=Zea mays GN=M... 108 6e-023
sp|P26585|HMGL_SOYBN HMG1/2-like protein OS=Glycine max PE=2 SV=1 104 1e-021
sp|P40620|HMGL_VICFA HMG1/2-like protein OS=Vicia faba PE=2 SV=1 102 4e-021
sp|P40621|HMGL_WHEAT HMG1/2-like protein OS=Triticum aestivum PE... 99 4e-020
sp|Q32L31|HMGB3_BOVIN High mobility group protein B3 OS=Bos taur... 73 2e-012
sp|O54879|HMGB3_MOUSE High mobility group protein B3 OS=Mus musc... 72 5e-012
sp|O15347|HMGB3_HUMAN High mobility group protein B3 OS=Homo sap... 70 1e-011
sp|P40618|HMGB3_CHICK High mobility group protein B3 OS=Gallus g... 70 1e-011
sp|P36194|HMGB1_CHICK High mobility group protein B1 OS=Gallus g... 69 4e-011
sp|P41848|SSP1A_CAEEL FACT complex subunit SSRP1-A OS=Caenorhabd... 68 5e-011
sp|O01683|SSP1B_CAEEL FACT complex subunit ssrp1-B OS=Caenorhabd... 68 7e-011
sp|P10103|HMGB1_BOVIN High mobility group protein B1 OS=Bos taur... 66 2e-010
sp|B0CM99|HMGB1_CALJA High mobility group protein B1 OS=Callithr... 66 2e-010
sp|B1MTB0|HMGB1_CALMO High mobility group protein B1 OS=Calliceb... 66 2e-010
sp|Q6YKA4|HMGB1_CANFA High mobility group protein B1 OS=Canis fa... 66 2e-010
sp|P07156|HMGB1_CRIGR High mobility group protein B1 (Fragment) ... 66 2e-010
sp|Q08IE6|HMGB1_HORSE High mobility group protein B1 OS=Equus ca... 66 2e-010
sp|P09429|HMGB1_HUMAN High mobility group protein B1 OS=Homo sap... 66 2e-010
sp|P0C6E5|HMG3M_HUMAN Putative high mobility group protein B3-li... 65 5e-010
>sp|P40619|HMGL_IPONI HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1
Length = 144
Score = 109 bits (271), Expect = 3e-023
Identities = 53/94 (56%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
Frame = -1
Query: 673 MKGGETKAQA--KSTDERLKTRGKKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPN 500
MKGG++KA++ K ++ KK K VKDPNKPKRPPSAFFVF+E FRK + +PN
Sbjct: 1 MKGGKSKAKSDNKLAVKKQAADTKKTKKAVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPN 60
Query: 499 NKSVGAVGKAAGAKWKSMTADDKAPYVEKAETKR 398
NKSV VGKA G KWK +TA +KAP++ KAE ++
Sbjct: 61 NKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRK 94
>sp|P27347|MNB1B_MAIZE DNA-binding protein MNB1B OS=Zea mays GN=MNB1B PE=1 SV=1
Length = 157
Score = 108 bits (268), Expect = 6e-023
Identities = 58/101 (57%), Positives = 68/101 (67%), Gaps = 9/101 (8%)
Frame = -1
Query: 673 MKGGETKAQAKSTDERLKTRGKKA--------GKKVKDPNKPKRPPSAFFVFLEGFRKEF 518
MKG ++K AK+ D +L + K A GK KDPNKPKR PSAFFVF+E FRKEF
Sbjct: 1 MKGAKSKGAAKA-DAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEF 59
Query: 517 NLANPNNKSVGAVGKAAGAKWKSMTADDKAPYVEKAETKRL 395
NP NKSV AVGKAAG +WKS++ DKAPYV KA +L
Sbjct: 60 KEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKL 100
>sp|P26585|HMGL_SOYBN HMG1/2-like protein OS=Glycine max PE=2 SV=1
Length = 152
Score = 104 bits (257), Expect = 1e-021
Identities = 50/76 (65%), Positives = 60/76 (78%), Gaps = 2/76 (2%)
Frame = -1
Query: 622 KTRGKKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNKSVGAVGKAAGAKWKSMT 443
K GK GK KDPNKPKRPPSAFFVF+E FRK FN +P NK+V AVGKAAGAKWK+M+
Sbjct: 30 KPAGK--GKAAKDPNKPKRPPSAFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMS 87
Query: 442 ADDKAPYVEKAETKRL 395
+KAPYV K+E +++
Sbjct: 88 DAEKAPYVAKSEKRKV 103
>sp|P40620|HMGL_VICFA HMG1/2-like protein OS=Vicia faba PE=2 SV=1
Length = 149
Score = 102 bits (252), Expect = 4e-021
Identities = 50/95 (52%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
Frame = -1
Query: 676 EMKGGETKAQAKSTDERLKTRGKK--AGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANP 503
E K ETK GKK GK+ KDPNKPKRPPSAFFVF+ FR+++ +P
Sbjct: 9 ESKKAETKLAVNKKGAAATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMADFREQYKKDHP 68
Query: 502 NNKSVGAVGKAAGAKWKSMTADDKAPYVEKAETKR 398
NNKSV AVGKA G +WKS++ ++KAPYV++A K+
Sbjct: 69 NNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKK 103
>sp|P40621|HMGL_WHEAT HMG1/2-like protein OS=Triticum aestivum PE=2 SV=1
Length = 161
Score = 99 bits (244), Expect = 4e-020
Identities = 53/90 (58%), Positives = 61/90 (67%), Gaps = 6/90 (6%)
Frame = -1
Query: 664 GETKAQAK-----STDERLKTRGKKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPN 500
G KA AK E+ +GKK GK KDPNKPKR PSAFFVF+ FR+EF NP
Sbjct: 8 GAAKADAKLAVKSKGAEKPAAKGKK-GKAGKDPNKPKRAPSAFFVFMGEFREEFKQKNPK 66
Query: 499 NKSVGAVGKAAGAKWKSMTADDKAPYVEKA 410
NKSV AVGKAAG +WKS++ +KAPYV KA
Sbjct: 67 NKSVAAVGKAAGERWKSLSESEKAPYVAKA 96
>sp|Q32L31|HMGB3_BOVIN High mobility group protein B3 OS=Bos taurus GN=HMGB3
PE=2 SV=2
Length = 200
Score = 73 bits (177), Expect = 2e-012
Identities = 38/83 (45%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Frame = -1
Query: 655 KAQAKSTDERLKTRG-KKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNKSVGAV 479
KA D +K G K GKK KDPN PKRPPS FF+F FR + ANP S+G V
Sbjct: 65 KADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSANP-GISIGDV 123
Query: 478 GKAAGAKWKSMTADDKAPYVEKA 410
K G W +++ +K PY+ KA
Sbjct: 124 AKKLGEMWNNLSDSEKQPYINKA 146
>sp|O54879|HMGB3_MOUSE High mobility group protein B3 OS=Mus musculus GN=Hmgb3
PE=2 SV=3
Length = 200
Score = 72 bits (174), Expect = 5e-012
Identities = 38/83 (45%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Frame = -1
Query: 655 KAQAKSTDERLKTRG-KKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNKSVGAV 479
KA D +K G K GKK KDPN PKRPPS FF+F FR + NP S+G V
Sbjct: 65 KADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDV 123
Query: 478 GKAAGAKWKSMTADDKAPYVEKA 410
K G W +++ ++K PYV KA
Sbjct: 124 AKKLGEMWNNLSDNEKQPYVTKA 146
>sp|O15347|HMGB3_HUMAN High mobility group protein B3 OS=Homo sapiens GN=HMGB3
PE=1 SV=4
Length = 200
Score = 70 bits (171), Expect = 1e-011
Identities = 37/83 (44%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = -1
Query: 655 KAQAKSTDERLKTRG-KKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNKSVGAV 479
KA D +K G K GKK KDPN PKRPPS FF+F FR + NP S+G V
Sbjct: 65 KADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDV 123
Query: 478 GKAAGAKWKSMTADDKAPYVEKA 410
K G W ++ +K PY+ KA
Sbjct: 124 AKKLGEMWNNLNDSEKQPYITKA 146
>sp|P40618|HMGB3_CHICK High mobility group protein B3 OS=Gallus gallus GN=HMGB3
PE=2 SV=2
Length = 202
Score = 70 bits (170), Expect = 1e-011
Identities = 38/83 (45%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Frame = -1
Query: 655 KAQAKSTDERLKTRG-KKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNKSVGAV 479
KA D +K G K GKK KDPN PKRPPSAFF+F FR + NP S+G V
Sbjct: 65 KADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSAFFLFCSEFRPKIKSTNP-GISIGDV 123
Query: 478 GKAAGAKWKSMTADDKAPYVEKA 410
K G W +++ +K PY KA
Sbjct: 124 AKKLGEMWNNLSDGEKQPYNNKA 146
>sp|P36194|HMGB1_CHICK High mobility group protein B1 OS=Gallus gallus GN=HMGB1
PE=2 SV=2
Length = 201
Score = 69 bits (166), Expect = 4e-011
Identities = 37/83 (44%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = -1
Query: 655 KAQAKSTDERLKTRG-KKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNKSVGAV 479
KA D +K G K GKK KDPN PKRPPS FF+F FR + NP S+G V
Sbjct: 64 KADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDV 122
Query: 478 GKAAGAKWKSMTADDKAPYVEKA 410
K G W +++ +K PY KA
Sbjct: 123 AKKLGEMWNNLSDGEKQPYNNKA 145
>sp|P41848|SSP1A_CAEEL FACT complex subunit SSRP1-A OS=Caenorhabditis elegans
GN=hmg-4 PE=2 SV=1
Length = 697
Score = 68 bits (165), Expect = 5e-011
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Frame = -1
Query: 664 GETKAQAKSTDERLKTRGKKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNKSVG 485
GE K + + ++R K GKK GKK KDPN PKR SA +++ F N + SV
Sbjct: 527 GEPKEKREKKEKREKKEGKK-GKKDKDPNAPKRATSA---YMQWFLASRNELKEDGDSVA 582
Query: 484 AVGKAAGAKWKSMTADDKAPYVEKAE 407
V K GAKWK+M++DDK + EKAE
Sbjct: 583 DVAKKGGAKWKTMSSDDKKKWEEKAE 608
>sp|O01683|SSP1B_CAEEL FACT complex subunit ssrp1-B OS=Caenorhabditis elegans
GN=hmg-3 PE=2 SV=1
Length = 689
Score = 68 bits (164), Expect = 7e-011
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Frame = -1
Query: 679 REMKGGETKAQAKSTDERLKTRGKKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPN 500
++ + E K + + ++ +K + K GKK KDPN+PKR +A+ ++ F N +
Sbjct: 526 KKKESKEKKNKREKKEKPVKEKAVKKGKKTKDPNEPKRATTAYIIW---FNANRNSMKED 582
Query: 499 NKSVGAVGKAAGAKWKSMTADDKAPYVEKA 410
++G V K AGAKWKSM+ADDK + +KA
Sbjct: 583 GDTLGDVAKKAGAKWKSMSADDKKEWNDKA 612
>sp|P10103|HMGB1_BOVIN High mobility group protein B1 OS=Bos taurus GN=HMGB1
PE=1 SV=3
Length = 215
Score = 66 bits (160), Expect = 2e-010
Identities = 37/85 (43%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = -1
Query: 655 KAQAKSTDERLKTRGKKAG---KKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNKSVG 485
KA + +KT G KK KDPN PKRPPSAFF+F +R + +P S+G
Sbjct: 65 KADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIG 123
Query: 484 AVGKAAGAKWKSMTADDKAPYVEKA 410
V K G W + ADDK PY +KA
Sbjct: 124 DVAKKLGEMWNNTAADDKQPYEKKA 148
>sp|B0CM99|HMGB1_CALJA High mobility group protein B1 OS=Callithrix jacchus
GN=HMGB1 PE=3 SV=1
Length = 215
Score = 66 bits (160), Expect = 2e-010
Identities = 37/85 (43%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = -1
Query: 655 KAQAKSTDERLKTRGKKAG---KKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNKSVG 485
KA + +KT G KK KDPN PKRPPSAFF+F +R + +P S+G
Sbjct: 65 KADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIG 123
Query: 484 AVGKAAGAKWKSMTADDKAPYVEKA 410
V K G W + ADDK PY +KA
Sbjct: 124 DVAKKLGEMWNNTAADDKQPYEKKA 148
>sp|B1MTB0|HMGB1_CALMO High mobility group protein B1 OS=Callicebus moloch
GN=HMGB1 PE=3 SV=1
Length = 215
Score = 66 bits (160), Expect = 2e-010
Identities = 37/85 (43%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = -1
Query: 655 KAQAKSTDERLKTRGKKAG---KKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNKSVG 485
KA + +KT G KK KDPN PKRPPSAFF+F +R + +P S+G
Sbjct: 65 KADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIG 123
Query: 484 AVGKAAGAKWKSMTADDKAPYVEKA 410
V K G W + ADDK PY +KA
Sbjct: 124 DVAKKLGEMWNNTAADDKQPYEKKA 148
>sp|Q6YKA4|HMGB1_CANFA High mobility group protein B1 OS=Canis familiaris
GN=HMGB1 PE=2 SV=3
Length = 215
Score = 66 bits (160), Expect = 2e-010
Identities = 37/85 (43%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = -1
Query: 655 KAQAKSTDERLKTRGKKAG---KKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNKSVG 485
KA + +KT G KK KDPN PKRPPSAFF+F +R + +P S+G
Sbjct: 65 KADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIG 123
Query: 484 AVGKAAGAKWKSMTADDKAPYVEKA 410
V K G W + ADDK PY +KA
Sbjct: 124 DVAKKLGEMWNNTAADDKQPYEKKA 148
>sp|P07156|HMGB1_CRIGR High mobility group protein B1 (Fragment) OS=Cricetulus
griseus GN=HMGB1 PE=1 SV=1
Length = 180
Score = 66 bits (160), Expect = 2e-010
Identities = 37/85 (43%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = -1
Query: 655 KAQAKSTDERLKTRGKKAG---KKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNKSVG 485
KA + +KT G KK KDPN PKRPPSAFF+F +R + +P S+G
Sbjct: 30 KADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIG 88
Query: 484 AVGKAAGAKWKSMTADDKAPYVEKA 410
V K G W + ADDK PY +KA
Sbjct: 89 DVAKKLGEMWNNTAADDKQPYEKKA 113
>sp|Q08IE6|HMGB1_HORSE High mobility group protein B1 OS=Equus caballus GN=HMGB1
PE=2 SV=3
Length = 215
Score = 66 bits (160), Expect = 2e-010
Identities = 37/85 (43%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = -1
Query: 655 KAQAKSTDERLKTRGKKAG---KKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNKSVG 485
KA + +KT G KK KDPN PKRPPSAFF+F +R + +P S+G
Sbjct: 65 KADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIG 123
Query: 484 AVGKAAGAKWKSMTADDKAPYVEKA 410
V K G W + ADDK PY +KA
Sbjct: 124 DVAKKLGEMWNNTAADDKQPYEKKA 148
>sp|P09429|HMGB1_HUMAN High mobility group protein B1 OS=Homo sapiens GN=HMGB1
PE=1 SV=3
Length = 215
Score = 66 bits (160), Expect = 2e-010
Identities = 37/85 (43%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Frame = -1
Query: 655 KAQAKSTDERLKTRGKKAG---KKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNKSVG 485
KA + +KT G KK KDPN PKRPPSAFF+F +R + +P S+G
Sbjct: 65 KADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHP-GLSIG 123
Query: 484 AVGKAAGAKWKSMTADDKAPYVEKA 410
V K G W + ADDK PY +KA
Sbjct: 124 DVAKKLGEMWNNTAADDKQPYEKKA 148
>sp|P0C6E5|HMG3M_HUMAN Putative high mobility group protein B3-like protein
OS=Homo sapiens PE=5 SV=1
Length = 187
Score = 65 bits (157), Expect = 5e-010
Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = -1
Query: 655 KAQAKSTDERLKTRGKKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNKSVGAVG 476
KA D+ +K G G K KDPN PKRPPS FF+F F + NP +G V
Sbjct: 65 KADKVHYDQEIKDYGPAKGGKKKDPNAPKRPPSGFFLFCSEFCPKSKSTNP-GIPIGDVA 123
Query: 475 KAAGAKWKSMTADDKAPYVEKA 410
K G WK++ +K PY+ +A
Sbjct: 124 KKLGEMWKNLNDSEKQPYITQA 145
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155,740,548,379
Number of Sequences: 518415
Number of Extensions: 155740548379
Number of Successful Extensions: 952083542
Number of sequences better than 0.0: 0
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