BLASTX 7.6.2
Query= UN40569 /QuerySize=782
(781 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G17560.1 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 155 4e-038
TAIR9_protein||AT2G17560.2 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 155 4e-038
TAIR9_protein||AT2G17560.3 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 155 4e-038
TAIR9_protein||AT4G35570.1 | Symbols: HMGB5, NFD5, HMGD, NFD05 |... 136 1e-032
TAIR9_protein||AT1G20696.2 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 113 1e-025
TAIR9_protein||AT1G20693.1 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 101 5e-022
TAIR9_protein||AT1G20693.2 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 101 5e-022
TAIR9_protein||AT1G20693.3 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 101 5e-022
TAIR9_protein||AT1G20696.1 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 101 9e-022
TAIR9_protein||AT1G20696.3 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 101 9e-022
TAIR9_protein||AT3G51880.1 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 98 6e-021
TAIR9_protein||AT3G51880.2 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 98 6e-021
TAIR9_protein||AT3G51880.3 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 98 6e-021
TAIR9_protein||AT3G28730.1 | Symbols: ATHMG, SSRP1, NFD | ATHMG ... 61 6e-010
>TAIR9_protein||AT2G17560.1 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 139
Score = 155 bits (390), Expect = 4e-038
Identities = 74/93 (79%), Positives = 85/93 (91%), Gaps = 1/93 (1%)
Frame = -1
Query: 673 MKGGETKAQAKSTDERLKTRGKKAGKKV-KDPNKPKRPPSAFFVFLEGFRKEFNLANPNN 497
MKGGE+KA+A STD+RLKTRG+KAGKK KDPN+PKRPPSAFFVFLE FRKEFNLANPNN
Sbjct: 1 MKGGESKAEATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNN 60
Query: 496 KSVGAVGKAAGAKWKSMTADDKAPYVEKAETKR 398
KSV VGKAAGA+WK+MT +DKAPYV KAE+++
Sbjct: 61 KSVATVGKAAGARWKAMTDEDKAPYVAKAESRK 93
Score = 54 bits (129), Expect = 7e-008
Identities = 29/53 (54%), Positives = 40/53 (75%), Gaps = 4/53 (7%)
Frame = -3
Query: 416 KG*DQKTEYAKTMQKYNMKLANGTSTAGDDDSDKSKSEVNDENDAASDEEEDD 258
K +KTEY K +Q+YN+KLA+GT+ +DDSDKSKSEV ++A S+EE +D
Sbjct: 88 KAESRKTEYIKNVQQYNLKLASGTNRE-EDDSDKSKSEV---DEAVSEEEAED 136
>TAIR9_protein||AT2G17560.2 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 139
Score = 155 bits (390), Expect = 4e-038
Identities = 74/93 (79%), Positives = 85/93 (91%), Gaps = 1/93 (1%)
Frame = -1
Query: 673 MKGGETKAQAKSTDERLKTRGKKAGKKV-KDPNKPKRPPSAFFVFLEGFRKEFNLANPNN 497
MKGGE+KA+A STD+RLKTRG+KAGKK KDPN+PKRPPSAFFVFLE FRKEFNLANPNN
Sbjct: 1 MKGGESKAEATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNN 60
Query: 496 KSVGAVGKAAGAKWKSMTADDKAPYVEKAETKR 398
KSV VGKAAGA+WK+MT +DKAPYV KAE+++
Sbjct: 61 KSVATVGKAAGARWKAMTDEDKAPYVAKAESRK 93
Score = 54 bits (129), Expect = 7e-008
Identities = 29/53 (54%), Positives = 40/53 (75%), Gaps = 4/53 (7%)
Frame = -3
Query: 416 KG*DQKTEYAKTMQKYNMKLANGTSTAGDDDSDKSKSEVNDENDAASDEEEDD 258
K +KTEY K +Q+YN+KLA+GT+ +DDSDKSKSEV ++A S+EE +D
Sbjct: 88 KAESRKTEYIKNVQQYNLKLASGTNRE-EDDSDKSKSEV---DEAVSEEEAED 136
>TAIR9_protein||AT2G17560.3 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 135
Score = 155 bits (390), Expect = 4e-038
Identities = 74/93 (79%), Positives = 85/93 (91%), Gaps = 1/93 (1%)
Frame = -1
Query: 673 MKGGETKAQAKSTDERLKTRGKKAGKKV-KDPNKPKRPPSAFFVFLEGFRKEFNLANPNN 497
MKGGE+KA+A STD+RLKTRG+KAGKK KDPN+PKRPPSAFFVFLE FRKEFNLANPNN
Sbjct: 1 MKGGESKAEATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNN 60
Query: 496 KSVGAVGKAAGAKWKSMTADDKAPYVEKAETKR 398
KSV VGKAAGA+WK+MT +DKAPYV KAE+++
Sbjct: 61 KSVATVGKAAGARWKAMTDEDKAPYVAKAESRK 93
>TAIR9_protein||AT4G35570.1 | Symbols: HMGB5, NFD5, HMGD, NFD05 | HMGB5 (HIGH
MOBILITY GROUP B 5); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor |
chr4:16887363-16888184 REVERSE
Length = 126
Score = 136 bits (342), Expect = 1e-032
Identities = 59/92 (64%), Positives = 79/92 (85%)
Frame = -1
Query: 673 MKGGETKAQAKSTDERLKTRGKKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNK 494
MK +T+ +++STD+RLK RG K GKK KDPN+PK+PPS FFVFL+ FRKEFNLANP+NK
Sbjct: 1 MKDNQTEVESRSTDDRLKVRGNKVGKKTKDPNRPKKPPSPFFVFLDDFRKEFNLANPDNK 60
Query: 493 SVGAVGKAAGAKWKSMTADDKAPYVEKAETKR 398
SVG VG+AAG KWK+MT +++AP+V K+++K+
Sbjct: 61 SVGNVGRAAGKKWKTMTEEERAPFVAKSQSKK 92
>TAIR9_protein||AT1G20696.2 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181193 FORWARD
Length = 148
Score = 113 bits (282), Expect = 1e-025
Identities = 67/145 (46%), Positives = 88/145 (60%), Gaps = 5/145 (3%)
Frame = -1
Query: 673 MKGGETKAQAKSTDERLKTRGKKAGK-KVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNN 497
MKG ++KA+ +ST + + K K KDPNKPKRP SAFFVF+E FR + +P N
Sbjct: 1 MKGAKSKAETRSTKLSVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKN 60
Query: 496 KSVGAVGKAAGAKWKSMTADDKAPYVEKAETKRLNTPRLCKNTT*NWLMEPVQLEMMTLT 317
KSV AVGKA G KWKS++ +KAPYV KA+ +++ + K N + +M LT
Sbjct: 61 KSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMK--AYNKKLVIALRKMRNLT 118
Query: 316 SPSLKSTMRMML--LVMRRKMMTKR 248
S + TMRMML V RRK M K+
Sbjct: 119 SQFQRLTMRMMLRMAVKRRKTMIKK 143
>TAIR9_protein||AT1G20693.1 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 145
Score = 101 bits (251), Expect = 5e-022
Identities = 52/97 (53%), Positives = 67/97 (69%), Gaps = 4/97 (4%)
Frame = -1
Query: 673 MKGGETKAQAKSTDERL-KTRGKKAGK---KVKDPNKPKRPPSAFFVFLEGFRKEFNLAN 506
MKG ++K + +S+ + K K AG+ KDPNKPKRP SAFFVF+E FR+ F N
Sbjct: 1 MKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKEN 60
Query: 505 PNNKSVGAVGKAAGAKWKSMTADDKAPYVEKAETKRL 395
P NKSV VGKAAG KWKS++ +KAPYV KAE +++
Sbjct: 61 PKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKV 97
Score = 54 bits (129), Expect = 7e-008
Identities = 29/53 (54%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
Frame = -3
Query: 404 QKTEYAKTMQKYNMKLANGTSTAGDDDSDKSKSEVNDENDA--ASDEEEDDD* 252
+K EY K ++ YN KL G D++SDKS SEVNDE+DA S+EEEDDD*
Sbjct: 95 RKVEYEKNIKAYNKKLEEGPKE--DEESDKSVSEVNDEDDAEDGSEEEEDDD* 145
>TAIR9_protein||AT1G20693.2 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 143
Score = 101 bits (251), Expect = 5e-022
Identities = 52/97 (53%), Positives = 67/97 (69%), Gaps = 4/97 (4%)
Frame = -1
Query: 673 MKGGETKAQAKSTDERL-KTRGKKAGK---KVKDPNKPKRPPSAFFVFLEGFRKEFNLAN 506
MKG ++K + +S+ + K K AG+ KDPNKPKRP SAFFVF+E FR+ F N
Sbjct: 1 MKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKEN 60
Query: 505 PNNKSVGAVGKAAGAKWKSMTADDKAPYVEKAETKRL 395
P NKSV VGKAAG KWKS++ +KAPYV KAE +++
Sbjct: 61 PKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKV 97
Score = 54 bits (129), Expect = 7e-008
Identities = 27/51 (52%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Frame = -3
Query: 404 QKTEYAKTMQKYNMKLANGTSTAGDDDSDKSKSEVNDENDAASDEEEDDD* 252
+K EY K ++ YN KL G D++SDKS SEVNDE+DA EEDDD*
Sbjct: 95 RKVEYEKNIKAYNKKLEEGPKE--DEESDKSVSEVNDEDDAEDGSEEDDD* 143
>TAIR9_protein||AT1G20693.3 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 144
Score = 101 bits (251), Expect = 5e-022
Identities = 52/97 (53%), Positives = 67/97 (69%), Gaps = 4/97 (4%)
Frame = -1
Query: 673 MKGGETKAQAKSTDERL-KTRGKKAGK---KVKDPNKPKRPPSAFFVFLEGFRKEFNLAN 506
MKG ++K + +S+ + K K AG+ KDPNKPKRP SAFFVF+E FR+ F N
Sbjct: 1 MKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKEN 60
Query: 505 PNNKSVGAVGKAAGAKWKSMTADDKAPYVEKAETKRL 395
P NKSV VGKAAG KWKS++ +KAPYV KAE +++
Sbjct: 61 PKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKV 97
Score = 52 bits (124), Expect = 3e-007
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Frame = -3
Query: 404 QKTEYAKTMQKYNMKLANGTSTAGDDDSDKSKSEVNDENDAASDEEEDDD 255
+K EY K ++ YN KL G D++SDKS SEVNDE+DA EE+DD
Sbjct: 95 RKVEYEKNIKAYNKKLEEGPKE--DEESDKSVSEVNDEDDAEDGSEEEDD 142
>TAIR9_protein||AT1G20696.1 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181174 FORWARD
Length = 142
Score = 101 bits (249), Expect = 9e-022
Identities = 49/94 (52%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
Frame = -1
Query: 673 MKGGETKAQAKSTDERLKTRGKKAGK-KVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNN 497
MKG ++KA+ +ST + + K K KDPNKPKRP SAFFVF+E FR + +P N
Sbjct: 1 MKGAKSKAETRSTKLSVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKN 60
Query: 496 KSVGAVGKAAGAKWKSMTADDKAPYVEKAETKRL 395
KSV AVGKA G KWKS++ +KAPYV KA+ +++
Sbjct: 61 KSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKV 94
Score = 56 bits (133), Expect = 3e-008
Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
Frame = -3
Query: 404 QKTEYAKTMQKYNMKLANGTSTAGDDDSDKSKSEVNDENDA--ASDEEEDDD* 252
+K EY K M+ YN KL G D++SDKS SEVNDE+DA S+EEEDDD*
Sbjct: 92 RKVEYEKNMKAYNKKLEEGPKE--DEESDKSVSEVNDEDDAEDGSEEEEDDD* 142
>TAIR9_protein||AT1G20696.3 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181170 FORWARD
Length = 141
Score = 101 bits (249), Expect = 9e-022
Identities = 49/94 (52%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
Frame = -1
Query: 673 MKGGETKAQAKSTDERLKTRGKKAGK-KVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNN 497
MKG ++KA+ +ST + + K K KDPNKPKRP SAFFVF+E FR + +P N
Sbjct: 1 MKGAKSKAETRSTKLSVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKN 60
Query: 496 KSVGAVGKAAGAKWKSMTADDKAPYVEKAETKRL 395
KSV AVGKA G KWKS++ +KAPYV KA+ +++
Sbjct: 61 KSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKV 94
>TAIR9_protein||AT3G51880.1 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 179
Score = 98 bits (242), Expect = 6e-021
Identities = 53/93 (56%), Positives = 64/93 (68%), Gaps = 3/93 (3%)
Frame = -1
Query: 676 EMKGGETKAQAKSTDERLKTRGKKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNN 497
+ K G+ KA A+ +R +TR +K K KDPNKPKR PSAFFVFLE FR F NPN
Sbjct: 22 DRKVGKRKAPAEKPTKR-ETRKEKKAK--KDPNKPKRAPSAFFVFLEDFRVTFKKENPNV 78
Query: 496 KSVGAVGKAAGAKWKSMTADDKAPYVEKAETKR 398
K+V AVGKA G KWKSM+ +KAPY EKA ++
Sbjct: 79 KAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRK 111
>TAIR9_protein||AT3G51880.2 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 186
Score = 98 bits (242), Expect = 6e-021
Identities = 53/93 (56%), Positives = 64/93 (68%), Gaps = 3/93 (3%)
Frame = -1
Query: 676 EMKGGETKAQAKSTDERLKTRGKKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNN 497
+ K G+ KA A+ +R +TR +K K KDPNKPKR PSAFFVFLE FR F NPN
Sbjct: 22 DRKVGKRKAPAEKPTKR-ETRKEKKAK--KDPNKPKRAPSAFFVFLEDFRVTFKKENPNV 78
Query: 496 KSVGAVGKAAGAKWKSMTADDKAPYVEKAETKR 398
K+V AVGKA G KWKSM+ +KAPY EKA ++
Sbjct: 79 KAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRK 111
>TAIR9_protein||AT3G51880.3 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 179
Score = 98 bits (242), Expect = 6e-021
Identities = 53/93 (56%), Positives = 64/93 (68%), Gaps = 3/93 (3%)
Frame = -1
Query: 676 EMKGGETKAQAKSTDERLKTRGKKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNN 497
+ K G+ KA A+ +R +TR +K K KDPNKPKR PSAFFVFLE FR F NPN
Sbjct: 22 DRKVGKRKAPAEKPTKR-ETRKEKKAK--KDPNKPKRAPSAFFVFLEDFRVTFKKENPNV 78
Query: 496 KSVGAVGKAAGAKWKSMTADDKAPYVEKAETKR 398
K+V AVGKA G KWKSM+ +KAPY EKA ++
Sbjct: 79 KAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRK 111
>TAIR9_protein||AT3G28730.1 | Symbols: ATHMG, SSRP1, NFD | ATHMG (ARABIDOPSIS
THALIANA HIGH MOBILITY GROUP); transcription factor |
chr3:10784954-10788498 FORWARD
Length = 647
Score = 61 bits (147), Expect = 6e-010
Identities = 37/91 (40%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = -1
Query: 670 KGGETKAQAKSTDERLKTRGKKAGKKVKDPNKPKRPPSAFFVFLEGFRKEFNLANPNNKS 491
KG K + + DE R K KK KDPN PKR S F F + R +P +
Sbjct: 532 KGLPPKRKTVAADEGSSKR--KKPKKKKDPNAPKRAMSGFMFFSQMERDNIKKEHP-GIA 588
Query: 490 VGAVGKAAGAKWKSMTADDKAPYVEKAETKR 398
G VGK G KW+ M+ADDK PY KA+ +
Sbjct: 589 FGEVGKVLGDKWRQMSADDKEPYEAKAQVDK 619
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,203,102,505
Number of Sequences: 33410
Number of Extensions: 20203102505
Number of Successful Extensions: 647739631
Number of sequences better than 0.0: 0
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