BLASTX 7.6.2
Query= UN40587 /QuerySize=1013
(1012 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G06634.1 | Symbols: | zinc finger (C2H2 type)... 374 5e-104
TAIR9_protein||AT4G06634.2 | Symbols: | zinc finger (C2H2 type)... 280 9e-076
TAIR9_protein||AT3G48430.1 | Symbols: REF6 | REF6 (RELATIVE OF E... 59 4e-009
>TAIR9_protein||AT4G06634.1 | Symbols: | zinc finger (C2H2 type) family protein
| chr4:3764499-3766439 REVERSE
Length = 388
Score = 374 bits (960), Expect = 5e-104
Identities = 170/194 (87%), Positives = 181/194 (93%), Gaps = 2/194 (1%)
Frame = +3
Query: 192 EQYPYQNPFERRPIVKSKAPAVKWIKEWVPQDIVATGGKCYLHKWVTEETVKRLKETEKE 371
+ Y YQNPFERRPI+KSKAPAVKWIKEWVPQDIVATGGKC+LHKWVTE+T RLKE EKE
Sbjct: 4 QNYQYQNPFERRPILKSKAPAVKWIKEWVPQDIVATGGKCHLHKWVTEDTFSRLKEKEKE 63
Query: 372 PTTDVPDPEPEPTSEILFLCSYEGCGKMFFDVSALRKHSHIHGERQYVCDYPGCDKKFLD 551
P DVP+PEPEPT+EILFLCSY+GCGK FFDVSALRKHSHIHGERQYVCD GC KKFLD
Sbjct: 64 P--DVPEPEPEPTTEILFLCSYDGCGKTFFDVSALRKHSHIHGERQYVCDQEGCGKKFLD 121
Query: 552 SSKLKRHWLIHTGARDFVCTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYSGCGKRYAH 731
SSKLKRH+LIHTG R+++CTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYSGC KRYAH
Sbjct: 122 SSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYSGCVKRYAH 181
Query: 732 EYKLKNHVAAYHEK 773
EYKLKNHVAAYHEK
Sbjct: 182 EYKLKNHVAAYHEK 195
Score = 88 bits (217), Expect = 7e-018
Identities = 39/99 (39%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Frame = +3
Query: 510 YVCDYPGCDKKFLDSSKLKRHWLIHTGARDFVCTYEGCGKAFSLDFNLRSHMKTHSQENY 689
++C Y GC K F D S L++H IH G R +VC EGCGK F L+ H H+ E
Sbjct: 79 FLCSYDGCGKTFFDVSALRKHSHIH-GERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERN 137
Query: 690 HICPYSGCGKRYAHEYKLKNHVAAYHEKVFHILFLQICV 806
+IC Y GCGK ++ ++ L++H+ + ++ +HI CV
Sbjct: 138 YICTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYSGCV 176
>TAIR9_protein||AT4G06634.2 | Symbols: | zinc finger (C2H2 type) family protein
| chr4:3764499-3766177 REVERSE
Length = 350
Score = 280 bits (716), Expect = 9e-076
Identities = 128/147 (87%), Positives = 136/147 (92%), Gaps = 2/147 (1%)
Frame = +3
Query: 333 EETVKRLKETEKEPTTDVPDPEPEPTSEILFLCSYEGCGKMFFDVSALRKHSHIHGERQY 512
E+T RLKE EKEP DVP+PEPEPT+EILFLCSY+GCGK FFDVSALRKHSHIHGERQY
Sbjct: 13 EDTFSRLKEKEKEP--DVPEPEPEPTTEILFLCSYDGCGKTFFDVSALRKHSHIHGERQY 70
Query: 513 VCDYPGCDKKFLDSSKLKRHWLIHTGARDFVCTYEGCGKAFSLDFNLRSHMKTHSQENYH 692
VCD GC KKFLDSSKLKRH+LIHTG R+++CTYEGCGKAFSLDFNLRSHMKTHSQENYH
Sbjct: 71 VCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQENYH 130
Query: 693 ICPYSGCGKRYAHEYKLKNHVAAYHEK 773
ICPYSGC KRYAHEYKLKNHVAAYHEK
Sbjct: 131 ICPYSGCVKRYAHEYKLKNHVAAYHEK 157
Score = 88 bits (217), Expect = 7e-018
Identities = 39/99 (39%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Frame = +3
Query: 510 YVCDYPGCDKKFLDSSKLKRHWLIHTGARDFVCTYEGCGKAFSLDFNLRSHMKTHSQENY 689
++C Y GC K F D S L++H IH G R +VC EGCGK F L+ H H+ E
Sbjct: 41 FLCSYDGCGKTFFDVSALRKHSHIH-GERQYVCDQEGCGKKFLDSSKLKRHYLIHTGERN 99
Query: 690 HICPYSGCGKRYAHEYKLKNHVAAYHEKVFHILFLQICV 806
+IC Y GCGK ++ ++ L++H+ + ++ +HI CV
Sbjct: 100 YICTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYSGCV 138
>TAIR9_protein||AT3G48430.1 | Symbols: REF6 | REF6 (RELATIVE OF EARLY FLOWERING
6); nucleic acid binding / transcription factor/ zinc ion binding |
chr3:17935609-17940456 FORWARD
Length = 1361
Score = 59 bits (141), Expect = 4e-009
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = +3
Query: 426 LCSYEGCGKMFFDVSALRKHSHIHG-ERQYVCDYPGCDKKFLDSSKLKRHWLIHTGARDF 602
+C +GCGK FF L +H +H +R C + GC F + H +HTGAR +
Sbjct: 1267 ICPIKGCGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVHTGARPY 1326
Query: 603 VCTYEGCGKAFSL--DFNLRSHMKTHS 677
VC CG+ F DF+ HS
Sbjct: 1327 VCAEPDCGQTFRFVSDFSRHKRKTGHS 1353
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,203,102,505
Number of Sequences: 33410
Number of Extensions: 20203102505
Number of Successful Extensions: 647739631
Number of sequences better than 0.0: 0
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