BLASTX 7.6.2
Query= UN40651 /QuerySize=1037
(1036 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|30688577|ref|NP_851056.1| histone deacetylase HDT2 [Arabidops... 268 1e-069
gi|145358319|ref|NP_197657.3| histone deacetylase HDT2 [Arabidop... 267 4e-069
gi|297815600|ref|XP_002875683.1| hypothetical protein ARALYDRAFT... 206 8e-051
gi|269969912|gb|ACZ54945.1| type 2 histone deacetylase a [Nicoti... 192 9e-047
gi|224104989|ref|XP_002313645.1| histone deacetylase [Populus tr... 192 1e-046
gi|118482036|gb|ABK92949.1| unknown [Populus trichocarpa] 191 3e-046
gi|269969916|gb|ACZ54947.1| type 2 histone deacetylase c [Nicoti... 186 5e-045
gi|73919938|sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacety... 185 1e-044
gi|269969914|gb|ACZ54946.1| type 2 histone deacetylase b [Nicoti... 184 2e-044
gi|118481941|gb|ABK92903.1| unknown [Populus trichocarpa] 183 4e-044
gi|118482528|gb|ABK93186.1| unknown [Populus trichocarpa] 183 4e-044
gi|224131666|ref|XP_002328078.1| histone deacetylase [Populus tr... 183 7e-044
gi|297808263|ref|XP_002872015.1| predicted protein [Arabidopsis ... 176 7e-042
gi|18407844|ref|NP_566872.1| histone deacetylase HDT1 [Arabidops... 173 7e-041
gi|2392769|gb|AAB70032.1| putative histone deacetylase [Arabidop... 173 7e-041
gi|73919943|sp|Q9M4U4.1|HDT3_MAIZE RecName: Full=Histone deacety... 172 1e-040
gi|242091217|ref|XP_002441441.1| hypothetical protein SORBIDRAFT... 171 2e-040
gi|195606718|gb|ACG25189.1| histone deacetylase 2b [Zea mays] 170 4e-040
gi|81074563|gb|ABB55369.1| histone deacetylase 2a-like [Solanum ... 155 1e-035
gi|255573038|ref|XP_002527449.1| Histone deacetylase 2a, putativ... 149 1e-033
>gi|30688577|ref|NP_851056.1| histone deacetylase HDT2 [Arabidopsis thaliana]
Length = 306
Score = 268 bits (684), Expect = 1e-069
Identities = 157/295 (53%), Positives = 188/295 (63%), Gaps = 35/295 (11%)
Frame = +1
Query: 70 MEFWGVEVKAGMPLKVRPQVDHVIHLSQAAVD--AKKGESGLLYVTIDWKKYVIGTLSQD 243
MEFWGV V KV P+ D ++H+SQA++D K GES +L VT+ K VIGTLSQD
Sbjct: 1 MEFWGVAVTPKNATKVTPEEDSLVHISQASLDCTVKSGESVVLSVTVGGAKLVIGTLSQD 60
Query: 244 HIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEEVV--PATST 417
PQ++FDLVF++EFELSHS +VHF+GY+SPNI+Q++ SD E+ E V PA +
Sbjct: 61 KFPQISFDLVFDKEFELSHSGTKANVHFIGYKSPNIEQDDFTSSDDEDVPEAVPAPAPTA 120
Query: 418 VTSVGNAAAASKAAGSKPKAKPAEVKP---------ESESDDDDESEEEKDEE------- 549
VT+ GNA AA A +KPKAKPAEVKP E ESDD+DESEE+ D E
Sbjct: 121 VTANGNAGAAVVKADTKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDDDSEKGMDVDE 180
Query: 550 ---DDSEEED--EEEEEETPKQPLEPSNKKRATASASKTPVPAKKTKTAVAP--TQNTEE 708
DD EEED +EEEEETPK+P EP NKKR S SKTPV KK K A AP T E
Sbjct: 181 DDSDDDEEEDSEDEEEEETPKKP-EPINKKRPNESVSKTPVSGKKAKPAAAPASTPQKTE 239
Query: 709 KKKKGGHTATQHPAKKGGKSPNQSPGQSSNGNKKQFNSGKQSGSNNKGKGKGKGR 873
+KKKGGHTAT HPAKKGGKSP N N+ + G+ SG NN K G+
Sbjct: 240 EKKKGGHTATPHPAKKGGKSP-------VNANQSPKSGGQSSGGNNNKKPFNSGK 287
>gi|145358319|ref|NP_197657.3| histone deacetylase HDT2 [Arabidopsis thaliana]
Length = 305
Score = 267 bits (680), Expect = 4e-069
Identities = 155/294 (52%), Positives = 188/294 (63%), Gaps = 34/294 (11%)
Frame = +1
Query: 70 MEFWGVEVKAGMPLKVRPQVDHVIHLSQAAVD--AKKGESGLLYVTIDWKKYVIGTLSQD 243
MEFWGV V KV P+ D ++H+SQA++D K GES +L VT+ K VIGTLSQD
Sbjct: 1 MEFWGVAVTPKNATKVTPEEDSLVHISQASLDCTVKSGESVVLSVTVGGAKLVIGTLSQD 60
Query: 244 HIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEEVV--PATST 417
PQ++FDLVF++EFELSHS +VHF+GY+SPNI+Q++ SD E+ E V PA +
Sbjct: 61 KFPQISFDLVFDKEFELSHSGTKANVHFIGYKSPNIEQDDFTSSDDEDVPEAVPAPAPTA 120
Query: 418 VTSVGNAAAASKAAGSKPKAKPAEVKP---------ESESDDDDESEEEKDEE------- 549
VT+ GNA AA A +KPKAKPAEVKP E ESDD+DESEE+ D E
Sbjct: 121 VTANGNAGAAVVKADTKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDDDSEKGMDVDE 180
Query: 550 ---DDSEEED--EEEEEETPKQPLEPSNKKRATASASKTPVPAKKTKTAVAPTQNTEE-K 711
DD EEED +EEEEETPK+P EP NKKR S SKTPV KK K A AP ++ +
Sbjct: 181 DDSDDDEEEDSEDEEEEETPKKP-EPINKKRPNESVSKTPVSGKKAKPAAAPASTPQKTE 239
Query: 712 KKKGGHTATQHPAKKGGKSPNQSPGQSSNGNKKQFNSGKQSGSNNKGKGKGKGR 873
KKKGGHTAT HPAKKGGKSP N N+ + G+ SG NN K G+
Sbjct: 240 KKKGGHTATPHPAKKGGKSP-------VNANQSPKSGGQSSGGNNNKKPFNSGK 286
>gi|297815600|ref|XP_002875683.1| hypothetical protein ARALYDRAFT_484880
[Arabidopsis lyrata subsp. lyrata]
Length = 247
Score = 206 bits (522), Expect = 8e-051
Identities = 123/255 (48%), Positives = 158/255 (61%), Gaps = 25/255 (9%)
Frame = +1
Query: 70 MEFWGVEVKAGMPLKVRPQVDHVIHLSQAAVDA---KKGESGLLYVTIDWKKYVIGTLSQ 240
MEFWG+EVK G P+ V P+ +IH+SQA++ KKGE L+V + + V+GTLS
Sbjct: 1 MEFWGIEVKPGKPVTVTPKEGTLIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 241 DHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEEVVPATSTV 420
++IPQ+ DLVFE+EFELSH+ GSV+FVGY++PNI YP +SEEEEE V
Sbjct: 61 ENIPQLFCDLVFEKEFELSHTWGKGSVYFVGYKTPNI----KYPLNSEEEEEEVEE---- 112
Query: 421 TSVGNAAAASKAAGSKPKAKPAEVKPESESDDDDESEEEKDEEDDSEEEDEEEEEETPKQ 600
GNAA A +KPKAKPAEVKP +++++DD +E DE+D ++D EEEEETP
Sbjct: 113 VPAGNAAKAV----AKPKAKPAEVKPVADAEEDDSDSDEMDEDDSDGDDDSEEEEETPTP 168
Query: 601 PLEPSNKKRATASASKTPVPAKKTKTAVAPTQNTEEKKKKGGHTATQHPAKKGGKSPNQS 780
SNKKRA +A KTPV +KK K AV P +K G T PA + KS +Q
Sbjct: 169 KKPASNKKRANETAPKTPVSSKKAKVAVTP-------QKTGKDINTPKPATQSPKSASQ- 220
Query: 781 PGQSSNGNKKQFNSG 825
S KK FNSG
Sbjct: 221 --VSCGSCKKTFNSG 233
>gi|269969912|gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]
Length = 295
Score = 192 bits (487), Expect = 9e-047
Identities = 121/294 (41%), Positives = 164/294 (55%), Gaps = 37/294 (12%)
Frame = +1
Query: 70 MEFWGVEVKAGMPLKVRPQVDHVIHLSQAA---VDAKKGESGLLYVTIDWKKYVIGTLSQ 240
MEFWG EVK+G PL V+P V+HLSQA+ + K +S L V ID KK V+GTLS
Sbjct: 1 MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKAQSVCLSVNIDGKKLVLGTLSS 60
Query: 241 DHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPN-IDQEEDYPSDSEEEEEVVPAT-- 411
D +PQ FDLVF+++FELSH+ +SGSV+F GY++ N ++EED D EE +E +P T
Sbjct: 61 DKVPQQQFDLVFDRDFELSHNWKSGSVYFFGYKATNPFEEEEDDEDDEEESDEDIPLTIA 120
Query: 412 ------STVTSVGNAAAASKAAGSKPKAKPAEVKPESESDDDDESEEEK----------- 540
+ V + A +A K K K E ++++DD+DES +E
Sbjct: 121 NNGKPEAKVKEAEKSNVAKDSASGKQKVKIVEPSKDAKADDEDESTDEDEMSEDEDSDMG 180
Query: 541 --DEEDDSEEEDEEEEEETPKQPLEPSNKKRATASASKTPVPAKKTKTAVAPTQNTEEKK 714
++E D ++E +E EEETPK+ EP KKR SA+KTPVP KK K T + K
Sbjct: 181 EGEDESDGDDESDEGEEETPKK-AEP-GKKRKADSATKTPVPDKKAKFV---TPQKTDGK 235
Query: 715 KKGGHTATQHPAKKGGKSPNQSPGQSSNGNKKQFNSGKQSGSNNKGKGKGKGRA 876
K GH AT HP+K+ GKSP +N N++ SG +G G A
Sbjct: 236 KGSGHVATPHPSKQAGKSP-------ANKNQQTPKSGGAHLCKTCNRGFGSENA 282
>gi|224104989|ref|XP_002313645.1| histone deacetylase [Populus trichocarpa]
Length = 275
Score = 192 bits (486), Expect = 1e-046
Identities = 124/283 (43%), Positives = 163/283 (57%), Gaps = 26/283 (9%)
Frame = +1
Query: 64 STMEFWGVEVKAGMPLKVRPQVDHVIHLSQAAV-DAKKG-ESGLLYVTIDWKKYVIGTLS 237
S+MEFWGVEVKAG PLKV P+ +IHLSQAA+ ++KKG ES L+V D KK V+GTLS
Sbjct: 2 SSMEFWGVEVKAGEPLKVEPKDFCMIHLSQAALGESKKGNESVPLFVKFDEKKLVLGTLS 61
Query: 238 QDHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEEVVPATST 417
++IPQ++FDLVFE+EFELSH+ + GSV F GY+ D D+ D E+ E
Sbjct: 62 PENIPQLSFDLVFEKEFELSHNWKKGSVFFCGYQVIPDDDASDFSGDEEDFE------FA 115
Query: 418 VTSVGNAAAASKAAGSKPKAKPAEVKPESESDDDDESEEEKDEEDDSEE----------E 567
+ AA A A K K V+P + D+DD E++ DE+ DSEE E
Sbjct: 116 KADIMKAATAKDKAAKPEKPKATLVEPSIDDDEDDSDEDDSDEDGDSEEGMSLDEDSDDE 175
Query: 568 DEEEEEETPKQPLEPSNKKRATASASKTPVPAKKTKTAVAPTQNTEEKKKKGGHTATQHP 747
+ E+EETPK+ ++KKRAT SA+KTPV +KK KTA Q T+ KK T HP
Sbjct: 176 SDSEDEETPKK--AETSKKRATDSATKTPVSSKKAKTAT--PQKTDAKK---AGQVTPHP 228
Query: 748 AK-KGGKSPNQSPGQSSNGNKKQFNSGKQSGSNNKGKGKGKGR 873
AK K + N S S GN + K G++ K + +
Sbjct: 229 AKGKAAANGNSSKSPKSGGNFSCKSCDKAFGTDGALKSHSQAK 271
>gi|118482036|gb|ABK92949.1| unknown [Populus trichocarpa]
Length = 275
Score = 191 bits (483), Expect = 3e-046
Identities = 124/283 (43%), Positives = 163/283 (57%), Gaps = 26/283 (9%)
Frame = +1
Query: 64 STMEFWGVEVKAGMPLKVRPQVDHVIHLSQAAV-DAKKG-ESGLLYVTIDWKKYVIGTLS 237
S+MEFWGVEVKAG PLKV P+ +IHLSQAA+ ++KKG ES L+V D KK V+GTLS
Sbjct: 2 SSMEFWGVEVKAGEPLKVEPKDFCMIHLSQAALGESKKGNESVPLFVKFDEKKLVLGTLS 61
Query: 238 QDHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEEVVPATST 417
++IPQ++FDLVFE+EFELSH+ + GSV F GY+ D D+ D E+ E
Sbjct: 62 PENIPQLSFDLVFEKEFELSHNWKKGSVFFCGYQVIPDDDASDFSGDEEDFE------FA 115
Query: 418 VTSVGNAAAASKAAGSKPKAKPAEVKPESESDDDDESEEEKDEEDDSEE----------E 567
+ AA A A K K V+P + D+DD E++ DE+ DSEE E
Sbjct: 116 KADIMKAATAKDKAAKPEKPKATLVEPSIDDDEDDSDEDDSDEDGDSEEGMSLDEDSDDE 175
Query: 568 DEEEEEETPKQPLEPSNKKRATASASKTPVPAKKTKTAVAPTQNTEEKKKKGGHTATQHP 747
+ E+EETPK+ ++KKRAT SA+KTPV +KK KTA T + KK G T HP
Sbjct: 176 SDSEDEETPKK--AETSKKRATDSATKTPVSSKKAKTA---TPLKTDAKKAG--QVTPHP 228
Query: 748 AK-KGGKSPNQSPGQSSNGNKKQFNSGKQSGSNNKGKGKGKGR 873
AK K + N S S GN + K G++ K + +
Sbjct: 229 AKGKAAANGNSSKSPKSGGNFSCKSCDKAFGTDGALKSHSQAK 271
>gi|269969916|gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]
Length = 282
Score = 186 bits (472), Expect = 5e-045
Identities = 111/256 (43%), Positives = 157/256 (61%), Gaps = 23/256 (8%)
Frame = +1
Query: 70 MEFWGVEVKAGMPLKVRPQVDHVIHLSQAAVDAKKGESG----LLYVTIDWKKYVIGTLS 237
MEFWG EVK+G PL V+P D V+HLSQA++ K + G L V +D KK +GTL+
Sbjct: 1 MEFWGAEVKSGQPLTVQPGDDMVLHLSQASLGEAKKDKGSEPVCLSVNVDGKKLALGTLN 60
Query: 238 QDHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEEVVPATST 417
D +PQ FDLVF+++FELSH+ ++GSV+F GY++ N ++E+ D +E +E +P T
Sbjct: 61 LDKLPQQQFDLVFDRDFELSHNWKNGSVYFFGYKAANPYEQEE---DEDESDEEIPLTLA 117
Query: 418 VTSVGNA-AAASKAAGSKPKAKPAEVKPESESDDDDESEEE----KDEEDDSEEEDEEE- 579
T A A+A+ +A K K K AE ++++DD+D+S +E +DEED EDE++
Sbjct: 118 NTGKSEAKASANDSASGKQKVKIAEPSKDAKADDEDDSSDEDDTSEDEEDSEMGEDEDDS 177
Query: 580 -----EEETPKQPLEPSNKKRATASASKTPVPAKKTKTAVAPTQNTEEKKKKGGHTATQH 744
+EETPK+ EPS KKR + SA KTP P KK K A T + KK H AT H
Sbjct: 178 DEDQSDEETPKK-AEPS-KKRPSDSAIKTPAPDKKAKFA---TPQKTDGKKGAVHVATPH 232
Query: 745 PAKKGGKSPNQSPGQS 792
P+K+ GK+ Q+
Sbjct: 233 PSKQAGKTSGNKSNQT 248
>gi|73919938|sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1;
AltName: Full=Histone deacetylase 2a; Short=HD2a; AltName: Full=ScHD2a
Length = 269
Score = 185 bits (468), Expect = 1e-044
Identities = 106/269 (39%), Positives = 157/269 (58%), Gaps = 12/269 (4%)
Frame = +1
Query: 70 MEFWGVEVKAGMPLKVRPQVDHVIHLSQAA---VDAKKGESGLLYVTIDWKKYVIGTLSQ 240
MEFWG EVK+G PL V+P V+HLSQA+ + K ES L V ID KK V+GTL+
Sbjct: 1 MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKSESVCLSVNIDGKKLVLGTLNS 60
Query: 241 DHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPN-IDQEEDYPSDSEEEEEVVPATST 417
+ +PQ FDLVF+++FELSH+L+SGSV+F GY++ N ++EED D +E +E +P T
Sbjct: 61 EKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFEEEEDDEDDYDESDEDIPLTLA 120
Query: 418 VTSVGNAAAASKAAGSKPKA---KPAEVKPESESDDDDESEEEKDEEDDSEEEDEEEEEE 588
+ A K+ K A + + ++ D+D+ S+++ + + E++ ++ EEE
Sbjct: 121 NSGKPEPKEAGKSNAGKDSASGKQKVRIVEPTKDDEDESSDDDDSDMGEDEDDSDDSEEE 180
Query: 589 TPKQPLEPSNKKRATASASKTPVPAKKTKTAVAPTQNTEEKKKKGGHTATQHPAKKGGKS 768
TPK+ EP+ K+R SA+KTPV KK K T + KK GGH AT HP+K+ K+
Sbjct: 181 TPKK-AEPA-KRRKADSATKTPVTDKKAKLT---TPQKTDGKKGGGHVATPHPSKQASKT 235
Query: 769 PNQSPGQSSNGNKKQFNSGKQSGSNNKGK 855
P + + F S S++K K
Sbjct: 236 PKSAGSHHCKPCNRSFGSEGALDSHSKAK 264
>gi|269969914|gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum]
Length = 294
Score = 184 bits (466), Expect = 2e-044
Identities = 123/295 (41%), Positives = 168/295 (56%), Gaps = 39/295 (13%)
Frame = +1
Query: 70 MEFWGVEVKAGMPLKVRPQVDHVIHLSQAA---VDAKKGESGLLYVTIDWKKYVIGTLSQ 240
MEFWG EVK+G PL V+P V+HLSQA+ + K +S L V ID KK V+GTL+
Sbjct: 1 MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKVQSVCLSVNIDGKKLVLGTLNS 60
Query: 241 DHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPN-IDQEEDYPSDSEEEEEVVPAT-- 411
D +PQ FDLVF+++FELSH+ ++GSV+F GY++ N ++EED D EE +E +P T
Sbjct: 61 DKVPQQQFDLVFDRDFELSHNWKNGSVYFFGYKATNPFEEEEDDEDDEEESDEDIPLTIA 120
Query: 412 ------STVTSVGNAAAASKAAGSKPKAKPAEVKPESESDDDDESEEE----KDE----- 546
+ V + AA +A K K K E ++++DD+DES +E +DE
Sbjct: 121 NNGKPEAKVKEAEKSNAAKDSASGKQKVKIVEPSKDAKADDEDESTDEDEMSEDEDSDVG 180
Query: 547 --EDDSEEEDE--EEEEETPKQPLEPSNKKRATASASKTPVPAKKTKTAVAPTQNTEEKK 714
ED+S+E+DE E EEETPK+ EP KKR SA+KTP K A T + K
Sbjct: 181 EGEDESDEDDESDESEEETPKK-AEP-GKKRKADSATKTPA----DKKAKFVTPQKTDGK 234
Query: 715 KKGGHTATQHPAKKGGKSP---NQSPGQSSNGN-----KKQFNSGKQSGSNNKGK 855
K GH AT HP+K+ GKSP NQ +S + + F S S++K K
Sbjct: 235 KGSGHVATPHPSKQAGKSPANKNQQTPKSGGAHLCKTCNRGFGSENALESHSKAK 289
>gi|118481941|gb|ABK92903.1| unknown [Populus trichocarpa]
Length = 279
Score = 183 bits (464), Expect = 4e-044
Identities = 123/289 (42%), Positives = 167/289 (57%), Gaps = 34/289 (11%)
Frame = +1
Query: 64 STMEFWGVEVKAGMPLKVRPQVDHVIHLSQAAV--DAKKG-ESGLLYVTIDWKKYVIGTL 234
S+MEFWGVEVKAG PLKV P+ ++IHLSQAA+ +KKG ES L++ +D KK V+GTL
Sbjct: 2 SSMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSKKGNESVPLFLKLDEKKLVLGTL 61
Query: 235 SQDHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEEVVPATS 414
S D IPQ++FDLVFE+EFELSH+ ++GSV F GY++ + + D+ D +E +P
Sbjct: 62 SPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAIPENDSDFSDDGDE----IP-FE 116
Query: 415 TVTSVGNAAAASKAA-GSKPKAKPAEVKPESESDDDDESEEEKDEED------------D 555
V +V A KAA KPKA P + ESDDDD S+++ DE+D D
Sbjct: 117 KVENVKFATGTDKAAKPEKPKANPVVPSKDDESDDDD-SDDDSDEDDSGDGSEGMSLEED 175
Query: 556 SEEEDEEEEEETPKQPLEPSNKKRATASASKTPVPAKKTKTAVAPTQNTEEKKKKGGHT- 732
++E + E+EETPK+ +KKR + SA KTPV +KK KTA +K GG
Sbjct: 176 LDDESDSEDEETPKK--AEQSKKRTSDSAIKTPVSSKKAKTAT-------PQKTDGGKAG 226
Query: 733 -ATQHPAK-KGGKSPNQSPGQSSNGNKKQFNSGKQSGSNNKGKGKGKGR 873
T HPAK K + N S GN + + GS+ K + +
Sbjct: 227 QVTPHPAKGKAASNGNNPKTPKSGGNFSCKSCERSFGSDGALKSHSQAK 275
>gi|118482528|gb|ABK93186.1| unknown [Populus trichocarpa]
Length = 279
Score = 183 bits (464), Expect = 4e-044
Identities = 123/289 (42%), Positives = 168/289 (58%), Gaps = 34/289 (11%)
Frame = +1
Query: 64 STMEFWGVEVKAGMPLKVRPQVDHVIHLSQAAV--DAKKG-ESGLLYVTIDWKKYVIGTL 234
S+MEFWGVEVKAG PLKV P+ ++IHLSQAA+ +KKG ES L++ +D KK V+GTL
Sbjct: 2 SSMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSKKGNESVPLFLKLDEKKLVLGTL 61
Query: 235 SQDHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEEVVPATS 414
S D IPQ++FDLVFE+EFELSH+ ++GSV F GY++ + + D+ D +E +P
Sbjct: 62 SPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAIPENDSDFSDDGDE----IP-FE 116
Query: 415 TVTSVGNAAAASKAA-GSKPKAKPAEVKPESESDDDDESEEEKDEED------------D 555
V +V A KAA KPKA P + ESDDDD S+++ DE+D D
Sbjct: 117 KVENVKFATGTDKAAKPEKPKANPVVPSKDDESDDDD-SDDDSDEDDSGDGSEGMSLEED 175
Query: 556 SEEEDEEEEEETPKQPLEPSNKKRATASASKTPVPAKKTKTAVAPTQNTEEKKKKGGHT- 732
++E + E+EETPK+ +KKR + SA KTPV +KK KTA +K GG
Sbjct: 176 LDDESDSEDEETPKK--AEQSKKRTSDSAIKTPVSSKKAKTAT-------PQKTDGGKAG 226
Query: 733 -ATQHPAKKGGKSPNQSPGQSSNGNKKQFNSGKQS-GSNNKGKGKGKGR 873
T HPAK S +P +G S ++S GS+ K + +
Sbjct: 227 QVTPHPAKGEAASNGNNPKTPKSGGNFSCKSCERSFGSDGALKSHSQAK 275
>gi|224131666|ref|XP_002328078.1| histone deacetylase [Populus trichocarpa]
Length = 260
Score = 183 bits (462), Expect = 7e-044
Identities = 120/266 (45%), Positives = 159/266 (59%), Gaps = 34/266 (12%)
Frame = +1
Query: 64 STMEFWGVEVKAGMPLKVRPQVDHVIHLSQAAV--DAKKG-ESGLLYVTIDWKKYVIGTL 234
S+MEFWGVEVKAG PLKV P+ ++IHLSQAA+ +KKG ES L++ +D KK V+GTL
Sbjct: 2 SSMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSKKGNESVPLFLKLDEKKLVLGTL 61
Query: 235 SQDHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEEVVPATS 414
S D IPQ++FDLVFE+EFELSH+ ++GSV F GY++ + + D+ D +E +P
Sbjct: 62 SPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAIPENDSDFSDDGDE----IP-FE 116
Query: 415 TVTSVGNAAAASKAA-GSKPKAKPAEVKPESESDDDDESEEEKDEED------------D 555
V +V A KAA KPKA P + ESDDDD S+++ DE+D D
Sbjct: 117 KVENVKFATGTDKAAKPEKPKANPVVPSKDDESDDDD-SDDDSDEDDSGDGSEGMSLEED 175
Query: 556 SEEEDEEEEEETPKQPLEPSNKKRATASASKTPVPAKKTKTAVAPTQNTEEKKKKGGHT- 732
++E + E+EETPK+ +KKR + SA KTPV +KK KTA +K GG
Sbjct: 176 LDDESDSEDEETPKK--AEQSKKRTSDSAIKTPVSSKKAKTAT-------PQKTDGGKAG 226
Query: 733 -ATQHPAK-KGGKSPNQSPGQSSNGN 804
T HPAK K + N S GN
Sbjct: 227 QVTPHPAKGKAASNGNNPKTPKSGGN 252
>gi|297808263|ref|XP_002872015.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 307
Score = 176 bits (445), Expect = 7e-042
Identities = 102/263 (38%), Positives = 148/263 (56%), Gaps = 11/263 (4%)
Frame = +1
Query: 76 FWGVEVKAGMPLKVRPQVDHVIHLSQAAVD--AKKGESGLLYVTIDWKKYVIGTLSQDHI 249
+ G+EVK G P KV P+ D ++H+SQA++D K GES +L VT+D K VIGTLSQ+
Sbjct: 9 YLGIEVKPGKPTKVTPEEDSLVHISQASLDCKVKSGESVVLTVTVDGTKLVIGTLSQEKF 68
Query: 250 PQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEEVVPA--TSTVT 423
PQ++FDLVFE+EFE+SH+ G+VHFVGYRSPNID E+ S+ E+ E VPA + V
Sbjct: 69 PQISFDLVFEREFEISHNGTKGTVHFVGYRSPNIDHEDYTSSEEEDVPEAVPAPVPAAVA 128
Query: 424 SVGNAAAASK---AAGSKPKAKPAEVKPESESDDDDESEEEKDEEDDSEEEDEEEEEETP 594
G+A AA+ A SKPKAKPAEVKP + ++ E+ DEED+S ++D+ E+
Sbjct: 129 VNGSAGAAASNVVKADSKPKAKPAEVKPAEVKPESEDDEDSSDEEDESADDDDSEKGMDV 188
Query: 595 KQPLEPSNKKRATASASKTPVPAKKTKTAVAPTQNTEEKKKKGGHTATQHPAKKGGKSPN 774
+ + + +TP K + + E K PA +P
Sbjct: 189 DEDDSDDEEDESEEEEEETP----KKPEPINKKRPNESTSKTPVSGKKAKPAAAPAATPQ 244
Query: 775 QSPGQSSNGNKKQFNSGKQSGSN 843
++ + G+ + K+SG +
Sbjct: 245 KTEEKKKGGHTATPHPAKKSGKS 267
>gi|18407844|ref|NP_566872.1| histone deacetylase HDT1 [Arabidopsis thaliana]
Length = 245
Score = 173 bits (436), Expect = 7e-041
Identities = 101/211 (47%), Positives = 136/211 (64%), Gaps = 21/211 (9%)
Frame = +1
Query: 70 MEFWGVEVKAGMPLKVRPQVDHVIHLSQAAVDA---KKGESGLLYVTIDWKKYVIGTLSQ 240
MEFWG+EVK+G P+ V P+ +IH+SQA++ KKGE L+V + + V+GTLS
Sbjct: 1 MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 241 DHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEEVVPATSTV 420
++IPQ+ DLVF++EFELSH+ GSV+FVGY++PNI + + Y + EEEEE VPA
Sbjct: 61 ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNI-EPQGYSEEEEEEEEEVPA---- 115
Query: 421 TSVGNAAAASKAAGSKPKAKPAEVKPESESDDDDESEEEKDEEDDSEEEDEEEEEETPKQ 600
GNAA A +KPKAKPAEVKP + D++DES+ + +EDDS+ ED EEEE TPK+
Sbjct: 116 ---GNAAKAV----AKPKAKPAEVKP-AVDDEEDESDSDGMDEDDSDGEDSEEEEPTPKK 167
Query: 601 PLEPSNK-----KRATASASKTPVPAKKTKT 678
P + +A SA K V KT
Sbjct: 168 PASSKKRANETTPKAPVSAKKAKVAVTPQKT 198
>gi|2392769|gb|AAB70032.1| putative histone deacetylase [Arabidopsis thaliana]
Length = 257
Score = 173 bits (436), Expect = 7e-041
Identities = 101/211 (47%), Positives = 136/211 (64%), Gaps = 21/211 (9%)
Frame = +1
Query: 70 MEFWGVEVKAGMPLKVRPQVDHVIHLSQAAVDA---KKGESGLLYVTIDWKKYVIGTLSQ 240
MEFWG+EVK+G P+ V P+ +IH+SQA++ KKGE L+V + + V+GTLS
Sbjct: 1 MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 241 DHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEEVVPATSTV 420
++IPQ+ DLVF++EFELSH+ GSV+FVGY++PNI + + Y + EEEEE VPA
Sbjct: 61 ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNI-EPQGYSEEEEEEEEEVPA---- 115
Query: 421 TSVGNAAAASKAAGSKPKAKPAEVKPESESDDDDESEEEKDEEDDSEEEDEEEEEETPKQ 600
GNAA A +KPKAKPAEVKP + D++DES+ + +EDDS+ ED EEEE TPK+
Sbjct: 116 ---GNAAKAV----AKPKAKPAEVKP-AVDDEEDESDSDGMDEDDSDGEDSEEEEPTPKK 167
Query: 601 PLEPSNK-----KRATASASKTPVPAKKTKT 678
P + +A SA K V KT
Sbjct: 168 PASSKKRANETTPKAPVSAKKAKVAVTPQKT 198
>gi|73919943|sp|Q9M4U4.1|HDT3_MAIZE RecName: Full=Histone deacetylase HDT3;
AltName: Full=Histone deacetylase 2c; Short=HD2c; AltName:
Full=Zm-HD2c
Length = 300
Score = 172 bits (434), Expect = 1e-040
Identities = 108/256 (42%), Positives = 147/256 (57%), Gaps = 32/256 (12%)
Frame = +1
Query: 70 MEFWGVEVKAGMPLKVRPQVDHVIHLSQAAV-DAKKGESGLLYVTIDWKKYVIGTLSQDH 246
MEFWG+EVK G +K P V+HLSQAA+ ++KK ++ L+YV ID +K IGTLS D
Sbjct: 1 MEFWGLEVKPGSTVKCEPGYGFVLHLSQAALGESKKSDNALMYVKIDDQKLAIGTLSVDK 60
Query: 247 IPQMTFDLVFEQEFELSHSLESGSVHFVGYR--SPNIDQEEDYPSDSEEEEEVVPATSTV 420
P + FDL+F++EFELSH+ ++ SV F GY+ P + E D S+ E+EE VPA V
Sbjct: 61 NPHIQFDLIFDKEFELSHTSKTTSVFFTGYKVEQPFEEDEMDLDSEDEDEELNVPA---V 117
Query: 421 TSVGNAAAASKAAGSKPKAKPAEVKPES-ESDDDDESEE------EKDEEDDSEE----- 564
G A + + K A P++ P+S +S DDD+S+E ++DE DDS+E
Sbjct: 118 KENGKADEKKQKSQEKAVAAPSKSSPDSKKSKDDDDSDEDETDDSDEDETDDSDEGLSPE 177
Query: 565 -------------EDEEEEEETPKQPLEPSNKKRATASASKTPVPAKKTKTAVAPTQNTE 705
+DEEE+ TPK+P E K+ A +S KTP+ KK K A +Q T
Sbjct: 178 EGDDDSSDEDDTSDDEEEDTPTPKKP-EVGKKRAAESSVLKTPLSDKKAKVATPSSQKTG 236
Query: 706 EKKKKGGHTATQHPAK 753
KK H AT HPAK
Sbjct: 237 GKKGAAVHVATPHPAK 252
>gi|242091217|ref|XP_002441441.1| hypothetical protein SORBIDRAFT_09g026730
[Sorghum bicolor]
Length = 299
Score = 171 bits (433), Expect = 2e-040
Identities = 113/282 (40%), Positives = 155/282 (54%), Gaps = 35/282 (12%)
Frame = +1
Query: 70 MEFWGVEVKAGMPLKVRPQVDHVIHLSQAAV-DAKKGESGLLYVTIDWKKYVIGTLSQDH 246
MEFWG+EVK G +K P ++HLSQAA+ ++KK ++ L+YV +D +K IGTLS D
Sbjct: 1 MEFWGLEVKPGSTVKCEPGHGFILHLSQAALGESKKSDNALMYVKVDDQKLAIGTLSIDK 60
Query: 247 IPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEEV-VPATSTVT 423
PQ+ FDLVF++EFELSH+ ++ SV F GY+ +E++ DSE+EEE+ VP
Sbjct: 61 FPQVQFDLVFDKEFELSHTSKTTSVFFSGYKVEQPMEEDEMDLDSEDEEELDVPVIKENG 120
Query: 424 SVGN---------AAAASKAAGSKPKAKPAEVKPESESDDDDE------------SEEEK 540
AAASK++ K+K + E E+DD D S EE
Sbjct: 121 KADGKEQKSQEKAVAAASKSSLVSKKSKDDDDSDEDETDDSDSDDTDDSDEGEGLSPEEG 180
Query: 541 DEEDDSEEED--EEEEEETPKQPLEPSNKKRATASASKTPVPAKKTKTAVAPTQNTEEKK 714
D++D S+E+D ++EEEETP +P K+ A S TP+ KK K A Q T K
Sbjct: 181 DDDDSSDEDDTSDDEEEETPTPKKKPEAGKKRPAENSLTPLSDKKAKVATPSAQKT-GGK 239
Query: 715 KKGGHTATQHPAKKGGKSPNQSPGQSSNGNKKQFNSGKQSGS 840
K H AT HPAK GK+P +N +K + S K GS
Sbjct: 240 KGAVHVATPHPAK--GKTP-------ANNDKSKEKSPKSGGS 272
>gi|195606718|gb|ACG25189.1| histone deacetylase 2b [Zea mays]
Length = 300
Score = 170 bits (430), Expect = 4e-040
Identities = 104/254 (40%), Positives = 146/254 (57%), Gaps = 28/254 (11%)
Frame = +1
Query: 70 MEFWGVEVKAGMPLKVRPQVDHVIHLSQAAV-DAKKGESGLLYVTIDWKKYVIGTLSQDH 246
MEFWG+EVK G +K P V+HLSQAA+ ++KK ++ L+YV ID +K IGTLS D
Sbjct: 1 MEFWGLEVKPGSTVKCEPGYGFVLHLSQAALGESKKSDNALMYVKIDDQKLAIGTLSVDK 60
Query: 247 IPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEEVVPATSTVTS 426
P + FDL+F++EFELSH+ ++ SV F GY+ +E++ DSE+E+E + V
Sbjct: 61 NPHIQFDLIFDKEFELSHTSKTTSVFFTGYKVEQPFEEDEMDLDSEDEDEEL-NVPVVKE 119
Query: 427 VGNAAAASKAAGSKPKAKPAEVKPES-ESDDDDESEE------EKDEEDDSEE------- 564
G A + + K A P++ P+S +S DDD+S+E ++DE DDS+E
Sbjct: 120 NGKADEKKQKSQEKAVAAPSKSSPDSKKSKDDDDSDEDETDDSDEDETDDSDEGLSPEEG 179
Query: 565 -----------EDEEEEEETPKQPLEPSNKKRATASASKTPVPAKKTKTAVAPTQNTEEK 711
+DEEE+ TPK+P E K+ A +S KTP+ KK K A +Q T K
Sbjct: 180 DDDSSDEDDTSDDEEEDTPTPKKP-EVGKKRAAESSVLKTPLSDKKAKVATPSSQKTGGK 238
Query: 712 KKKGGHTATQHPAK 753
K H AT HPAK
Sbjct: 239 KGAAVHVATPHPAK 252
>gi|81074563|gb|ABB55369.1| histone deacetylase 2a-like [Solanum tuberosum]
Length = 203
Score = 155 bits (391), Expect = 1e-035
Identities = 87/203 (42%), Positives = 128/203 (63%), Gaps = 9/203 (4%)
Frame = +1
Query: 70 MEFWGVEVKAGMPLKVRPQVDHVIHLSQAA---VDAKKGESGLLYVTIDWKKYVIGTLSQ 240
MEFWG EVK+G PL V+P V+HLSQA+ + K ES L V ID KK V+GTL+
Sbjct: 1 MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKSESVCLSVNIDGKKLVLGTLNS 60
Query: 241 DHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPN-IDQEEDYPSDSEEEEEVVPATST 417
+ +PQ FDLVF+++FELSH+L+SGSV+F GY++ N ++EED D +E +E +P T
Sbjct: 61 EKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFEEEEDDEDDYDESDEDIPLTLA 120
Query: 418 VTSVGNAAAASKAAGSKPKA---KPAEVKPESESDDDDESEEEKDEEDDSEEEDEEEEEE 588
+ A K+ K A + + ++ D+D+ S+++ E + E++ ++ EEE
Sbjct: 121 NSGKPEPKEAGKSNAGKDSASGKQKVRIVEPTKDDEDESSDDDDSELGEDEDDSDDSEEE 180
Query: 589 TPKQPLEPSNKKRATASASKTPV 657
TPK+ EP+ KKR SA+KTPV
Sbjct: 181 TPKK-AEPA-KKRKADSATKTPV 201
>gi|255573038|ref|XP_002527449.1| Histone deacetylase 2a, putative [Ricinus
communis]
Length = 310
Score = 149 bits (374), Expect = 1e-033
Identities = 83/270 (30%), Positives = 149/270 (55%), Gaps = 7/270 (2%)
Frame = +1
Query: 70 MEFWGVEVKAGMPLKVRPQVDHVIHLSQAAVDAKKGESG----LLYVTIDWKKYVIGTLS 237
MEFWGVE+KAG LKV P + +IHLSQAA+ K E G LYV +D KK ++GTLS
Sbjct: 1 MEFWGVEIKAGETLKVEPNPESLIHLSQAALGESKKEKGNESVPLYVKVDNKKIILGTLS 60
Query: 238 QDHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEEVVPATST 417
Q++ PQ+ FD+VFE+E ELSH+ ++GSV+ GY++P ++++ + + ++EE +P +
Sbjct: 61 QENFPQIAFDIVFEKEVELSHNWKNGSVYLSGYQTPLPEEDDMFSEEESDDEEPLPLVNA 120
Query: 418 VTSVGNAAAASKAAGSKPKAKP-AEVKPESESDDDDESEEEKDEEDDSEEEDEEEEEETP 594
A KAA AKP + K +++ ++EE D++D+S+++D++E+++
Sbjct: 121 DNGGIQLAGTQKAAAKSNIAKPESSTKQKAKPVQPSKAEEASDDDDESDDDDDDEDDDED 180
Query: 595 KQPLEPSNKKRATASASKTPVPAKKTKTAVAPTQNTEEKKKKGGHTATQHPAKKGGKSPN 774
+ E +++ + +++ P + ++ KK+ +A + P K+
Sbjct: 181 ESDDEDESEEGMSVDEDSDDEGDSESEDEETP-KKADKGKKRQNDSAVKTPV-SSKKAKL 238
Query: 775 QSPGQSSNGNKKQFNSGKQSGSNNKGKGKG 864
+P ++++G K + K G
Sbjct: 239 ITPQKTADGKKGGHTATPHPAKGAKASANG 268
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,486,047,059,872
Number of Sequences: 15229318
Number of Extensions: 4486047059872
Number of Successful Extensions: 1052332685
Number of sequences better than 0.0: 0
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