BLASTX 7.6.2
Query= UN40668 /QuerySize=1279
(1278 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q5HHM8|CLFA_STAAC Clumping factor A OS=Staphylococcus aureus ... 59 9e-008
sp|Q53653|CLFA_STAAE Clumping factor A OS=Staphylococcus aureus ... 59 9e-008
sp|Q6GB45|CLFA_STAAS Clumping factor A OS=Staphylococcus aureus ... 57 2e-007
sp|Q8NXJ1|CLFA_STAAW Clumping factor A OS=Staphylococcus aureus ... 57 2e-007
sp|Q5HCR7|CLFB_STAAC Clumping factor B OS=Staphylococcus aureus ... 54 2e-006
sp|O86476|CLFB_STAAE Clumping factor B OS=Staphylococcus aureus ... 54 2e-006
sp|Q6GDH2|CLFB_STAAR Clumping factor B OS=Staphylococcus aureus ... 54 3e-006
sp|Q2FUY2|CLFB_STAA8 Clumping factor B OS=Staphylococcus aureus ... 53 4e-006
sp|Q6GIK4|CLFA_STAAR Clumping factor A OS=Staphylococcus aureus ... 53 5e-006
>sp|Q5HHM8|CLFA_STAAC Clumping factor A OS=Staphylococcus aureus (strain COL)
GN=clfA PE=3 SV=1
Length = 933
Score = 59 bits (140), Expect = 9e-008
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Frame = +1
Query: 73 SSSDDDEVVDSSAGEEEEHEDDDDASSSEEEEEDQPKPPSSSAVTIPGKTSDSGSETETD 252
S SD D DS + + E + D ++ S + + D S + + SDSGS++++
Sbjct: 791 SDSDSDSDSDSDSDSDSESDSDSESDSDSDSDSDSDSDSDSDSDSDSASDSDSGSDSDSS 850
Query: 253 SDSDTEQPPNQRSGKGILAKDKSPPPLPKSGTKRPSEETSRETNSKREKKTGED 414
SDSD+E N S G + PP PK+GT ++ ++++ ED
Sbjct: 851 SDSDSESDSNSDSESG-SNNNVVPPNSPKNGTNASNKNEAKDSKEPLPDTGSED 903
>sp|Q53653|CLFA_STAAE Clumping factor A OS=Staphylococcus aureus (strain Newman)
GN=clfA PE=1 SV=1
Length = 933
Score = 59 bits (140), Expect = 9e-008
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Frame = +1
Query: 73 SSSDDDEVVDSSAGEEEEHEDDDDASSSEEEEEDQPKPPSSSAVTIPGKTSDSGSETETD 252
S SD D DS + + E + D ++ S + + D S + + SDSGS++++
Sbjct: 791 SDSDSDSDSDSDSDSDSESDSDSESDSDSDSDSDSDSDSDSDSDSDSASDSDSGSDSDSS 850
Query: 253 SDSDTEQPPNQRSGKGILAKDKSPPPLPKSGTKRPSEETSRETNSKREKKTGED 414
SDSD+E N S G + PP PK+GT ++ ++++ ED
Sbjct: 851 SDSDSESDSNSDSESG-SNNNVVPPNSPKNGTNASNKNEAKDSKEPLPDTGSED 903
>sp|Q6GB45|CLFA_STAAS Clumping factor A OS=Staphylococcus aureus (strain
MSSA476) GN=clfA PE=3 SV=1
Length = 928
Score = 57 bits (137), Expect = 2e-007
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Frame = +1
Query: 73 SSSDDDEVVDSSAGEEEEHEDDDDASSSEEEEEDQPKPPSSSAVTIPGKTSDSGSETETD 252
S SD D DS + + + + + D+ S + + D S + + SDSGS++++
Sbjct: 786 SDSDSDSDSDSDSDSDSDSDSESDSDSESDSDSDSDSDSDSDSDSDSASDSDSGSDSDSS 845
Query: 253 SDSDTEQPPNQRSGKGILAKDKSPPPLPKSGTKRPSEETSRETNSKREKKTGED 414
SDSD+E N S G + PP PK+GT ++ ++++ ED
Sbjct: 846 SDSDSESDSNSDSESG-SNNNVVPPNSPKNGTNASNKNEAKDSKEPLPDTGSED 898
>sp|Q8NXJ1|CLFA_STAAW Clumping factor A OS=Staphylococcus aureus (strain MW2)
GN=clfA PE=3 SV=1
Length = 946
Score = 57 bits (137), Expect = 2e-007
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Frame = +1
Query: 73 SSSDDDEVVDSSAGEEEEHEDDDDASSSEEEEEDQPKPPSSSAVTIPGKTSDSGSETETD 252
S SD D DS + + + + + D+ S + + D S + + SDSGS++++
Sbjct: 804 SDSDSDSDSDSDSDSDSDSDSESDSDSESDSDSDSDSDSDSDSDSDSASDSDSGSDSDSS 863
Query: 253 SDSDTEQPPNQRSGKGILAKDKSPPPLPKSGTKRPSEETSRETNSKREKKTGED 414
SDSD+E N S G + PP PK+GT ++ ++++ ED
Sbjct: 864 SDSDSESDSNSDSESG-SNNNVVPPNSPKNGTNASNKNEAKDSKEPLPDTGSED 916
>sp|Q5HCR7|CLFB_STAAC Clumping factor B OS=Staphylococcus aureus (strain COL)
GN=clfB PE=3 SV=1
Length = 913
Score = 54 bits (129), Expect = 2e-006
Identities = 29/123 (23%), Positives = 54/123 (43%)
Frame = +1
Query: 49 PLENPPAASSSDDDEVVDSSAGEEEEHEDDDDASSSEEEEEDQPKPPSSSAVTIPGKTSD 228
P +P S SD D DS +G + + E D D+ S + + D S + + SD
Sbjct: 578 PSPDPDPDSDSDSDSGSDSDSGSDSDSESDSDSDSDSDSDSDSDSESDSDSESDSDSDSD 637
Query: 229 SGSETETDSDSDTEQPPNQRSGKGILAKDKSPPPLPKSGTKRPSEETSRETNSKREKKTG 408
S S++++DSDSD++ + S ++ S ++ +++S + +
Sbjct: 638 SDSDSDSDSDSDSDSDSDSDSDSDSDSESDSDSESDSESDSDSDSDSDSDSDSDSDSDSD 697
Query: 409 EDS 417
DS
Sbjct: 698 SDS 700
>sp|O86476|CLFB_STAAE Clumping factor B OS=Staphylococcus aureus (strain Newman)
GN=clfB PE=1 SV=2
Length = 913
Score = 54 bits (129), Expect = 2e-006
Identities = 29/123 (23%), Positives = 54/123 (43%)
Frame = +1
Query: 49 PLENPPAASSSDDDEVVDSSAGEEEEHEDDDDASSSEEEEEDQPKPPSSSAVTIPGKTSD 228
P +P S SD D DS +G + + E D D+ S + + D S + + SD
Sbjct: 578 PSPDPDPDSDSDSDSGSDSDSGSDSDSESDSDSDSDSDSDSDSDSESDSDSESDSDSDSD 637
Query: 229 SGSETETDSDSDTEQPPNQRSGKGILAKDKSPPPLPKSGTKRPSEETSRETNSKREKKTG 408
S S++++DSDSD++ + S ++ S ++ +++S + +
Sbjct: 638 SDSDSDSDSDSDSDSDSDSDSDSDSDSESDSDSESDSESDSDSDSDSDSDSDSDSDSDSD 697
Query: 409 EDS 417
DS
Sbjct: 698 SDS 700
>sp|Q6GDH2|CLFB_STAAR Clumping factor B OS=Staphylococcus aureus (strain
MRSA252) GN=clfB PE=3 SV=1
Length = 873
Score = 54 bits (127), Expect = 3e-006
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Frame = +1
Query: 73 SSSDDDEVVDSSAGEEEEHEDDDDASSSEEEEEDQPKPPSSSAVTIPGKTSDSGSETETD 252
S SD D DS + + + E D ++ S + E D P S + + SDS S+++++
Sbjct: 720 SDSDSDSDSDSDSDSDSDSESDSESDSDSDSESDSDSDPDSESDSDSDSDSDSDSDSDSE 779
Query: 253 SDSDTEQPPNQRSGKGILAKDKSPPPLPKSGTKRPSEETSRETNSKREKKTGEDSKKP 426
SDSD+E + S + + P P + K PS +S + K + P
Sbjct: 780 SDSDSESDSDSDSDSDSDSDSRVTP--PNNEQKAPSNPKGEVNHSNKASKQHQTDALP 835
Score = 53 bits (125), Expect = 5e-006
Identities = 29/124 (23%), Positives = 52/124 (41%)
Frame = +1
Query: 49 PLENPPAASSSDDDEVVDSSAGEEEEHEDDDDASSSEEEEEDQPKPPSSSAVTIPGKTSD 228
P P S SD D DS +G + + + D D+ S + D S + + SD
Sbjct: 580 PSPEPDPDSDSDSDSGSDSDSGSDSDSDSDSDSDSDSDSNSDSESDSDSDSDSDSDSDSD 639
Query: 229 SGSETETDSDSDTEQPPNQRSGKGILAKDKSPPPLPKSGTKRPSEETSRETNSKREKKTG 408
S S++++DSDSD+E + S + S ++ +++S + +
Sbjct: 640 SDSDSDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSDSNSDSDSDSDSDSDSDSDSDSD 699
Query: 409 EDSK 420
DS+
Sbjct: 700 SDSE 703
>sp|Q2FUY2|CLFB_STAA8 Clumping factor B OS=Staphylococcus aureus (strain NCTC
8325) GN=clfB PE=1 SV=1
Length = 877
Score = 53 bits (126), Expect = 4e-006
Identities = 29/123 (23%), Positives = 53/123 (43%)
Frame = +1
Query: 49 PLENPPAASSSDDDEVVDSSAGEEEEHEDDDDASSSEEEEEDQPKPPSSSAVTIPGKTSD 228
P +P S SD D DS +G + + E D D+ S + + D S + + SD
Sbjct: 578 PSPDPDPDSDSDSDSGSDSDSGSDSDSESDSDSDSDSDSDSDSDSESDSDSESDSESDSD 637
Query: 229 SGSETETDSDSDTEQPPNQRSGKGILAKDKSPPPLPKSGTKRPSEETSRETNSKREKKTG 408
S S++++DSDSD++ + S + S ++ +++S + +
Sbjct: 638 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 697
Query: 409 EDS 417
DS
Sbjct: 698 SDS 700
>sp|Q6GIK4|CLFA_STAAR Clumping factor A OS=Staphylococcus aureus (strain
MRSA252) GN=clfA PE=3 SV=1
Length = 1029
Score = 53 bits (125), Expect = 5e-006
Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 1/155 (0%)
Frame = +1
Query: 73 SSSDDDEVVDSSAGEEEEHEDDDDASSSEEEEEDQPKPPSSSAVTIPGKTSDSGSETETD 252
S SD D DS + + E + D D+ S + + D S + + SDS S++++D
Sbjct: 799 SDSDSDSDSDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSDSDSDLDSDSDSDSDSDSD 858
Query: 253 SDSDTEQPPNQRSGKGILAKDKSPPPLPKSGTKRPSEETSRETNSKREKKTGEDSKKPAA 432
SDSD++ + S + + S ++ +++S E + DS +
Sbjct: 859 SDSDSDSDSDSDSDSDLDSDSDSDSDSDSDSDSASDSDSDSDSDSDSESDSDSDSDSDSD 918
Query: 433 FQRLWTED-DEISVLQGMIDFKNDTGNSPYDDTNA 534
D D S D +DTG+ D+ +
Sbjct: 919 SDSASDSDSDSDSASDSDSDSTSDTGSDNDSDSES 953
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 156,274,146,103
Number of Sequences: 518415
Number of Extensions: 156274146103
Number of Successful Extensions: 960041085
Number of sequences better than 0.0: 0
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