BLASTX 7.6.2

Query= UN40686 /QuerySize=973
        (972 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G18990.1 | Symbols: VRN1, REM39 | VRN1 (REDUCE...    351   4e-097
TAIR9_protein||AT1G49480.1 | Symbols: RTV1 | RTV1 (related to ve...    326   1e-089

>TAIR9_protein||AT3G18990.1 | Symbols: VRN1, REM39 | VRN1 (REDUCED VERNALIZATION
        RESPONSE 1); transcription repressor | chr3:6549077-6551568 REVERSE

          Length = 342

 Score =  351 bits (900), Expect = 4e-097
 Identities = 175/198 (88%), Positives = 186/198 (93%), Gaps = 5/198 (2%)
 Frame = +2

Query:  86 ETTLHANKEHASSAIQSFFTGPVKAEEATPTPTLKVTKKRGRKKKNSDPVNPEEVNSSAP 265
           E+T+ ANK +ASSAIQ+ FTGPVKAEE TPTP  K+ KKRGRKKKN+D   PEE+NSSAP
Sbjct: 146 ESTVPANKGYASSAIQTLFTGPVKAEEPTPTP--KIPKKRGRKKKNAD---PEEINSSAP 200

Query: 266 RDDDSESRSKFYESASARKRTVTAEERERAINASKTYEPTNPFFRVVLRPSYLYRGCIMY 445
           RDDD E+RSKFYESASARKRTVTAEERERAINA+KT+EPTNPFFRVVLRPSYLYRGCIMY
Sbjct: 201 RDDDPENRSKFYESASARKRTVTAEERERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMY 260

Query: 446 LPSGFAEKYLSGISGFIKVQLGEKQWPVRCLYKAGRAKFSQGWYEFTVENNLGEGDVCVF 625
           LPSGFAEKYLSGISGFIKVQL EKQWPVRCLYKAGRAKFSQGWYEFT+ENNLGEGDVCVF
Sbjct: 261 LPSGFAEKYLSGISGFIKVQLAEKQWPVRCLYKAGRAKFSQGWYEFTLENNLGEGDVCVF 320

Query: 626 ELLRTRDFVLKVTAFRVN 679
           ELLRTRDFVLKVTAFRVN
Sbjct: 321 ELLRTRDFVLKVTAFRVN 338


 Score =  52 bits (124), Expect = 4e-007
 Identities = 26/29 (89%), Gaps = 1/29 (3%)
 Frame = +2

Query:   2 HSTGLMDSAAHNHFKRPCLFEDLEDEDAE 88
           HSTGLMDS AHNHFKR  LFEDLEDEDAE
Sbjct: 105 HSTGLMDS-AHNHFKRARLFEDLEDEDAE 132

>TAIR9_protein||AT1G49480.1 | Symbols: RTV1 | RTV1 (related to vernalization1
        1); DNA binding / transcription factor | chr1:18314596-18315460
        REVERSE

          Length = 227

 Score =  326 bits (835), Expect = 1e-089
 Identities = 173/230 (75%), Positives = 188/230 (81%), Gaps = 18/230 (7%)
 Frame = +2

Query:  17 MDSAAHNHFKRPCLFEDLEDEDAETTLHANKEH---------ASSAIQSFFTGPVKAEEA 169
           MDSA +   KR  LFED E +DA+    +N E           S+AIQSFF    K  +A
Sbjct:   3 MDSAQNQFNKRARLFEDPELKDAKVIYPSNPESTEPVNKGYGGSTAIQSFF----KESKA 58

Query: 170 TPTPTLKVTKKRGRKKKNSDPVNPEEVNSSAPRDDDSESRSKFYESASARKRTVTAEERE 349
             TP  KV KKRGRKKKN    NPEEVNSS P  DDSE+RSKFYESASARKRTVTAEERE
Sbjct:  59 EETP--KVLKKRGRKKKNP---NPEEVNSSTPGGDDSENRSKFYESASARKRTVTAEERE 113

Query: 350 RAINASKTYEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLGEKQWPV 529
           RA+NA+KT+EPTNP+FRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIK+QLGEKQWPV
Sbjct: 114 RAVNAAKTFEPTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGEKQWPV 173

Query: 530 RCLYKAGRAKFSQGWYEFTVENNLGEGDVCVFELLRTRDFVLKVTAFRVN 679
           RCLYKAGRAKFSQGWYEFT+ENN+GEGDVCVFELLRTRDFVL+VTAFRVN
Sbjct: 174 RCLYKAGRAKFSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAFRVN 223

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,248,867,085
Number of Sequences: 33410
Number of Extensions: 20248867085
Number of Successful Extensions: 647821861
Number of sequences better than 0.0: 0