BLASTX 7.6.2

Query= UN40705 /QuerySize=933
        (932 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT1G33980.1 | Symbols: ATUPF3, UPF3 | Smg-4/UPF3 ...    216   1e-056
TAIR9_protein||AT1G33980.2 | Symbols: ATUPF3, UPF3 | Smg-4/UPF3 ...    216   1e-056
TAIR9_protein||AT4G13340.1 | Symbols:  | leucine-rich repeat fam...     48   9e-006

>TAIR9_protein||AT1G33980.1 | Symbols: ATUPF3, UPF3 | Smg-4/UPF3 family protein
        | chr1:12351719-12354401 FORWARD

          Length = 483

 Score =  216 bits (550), Expect = 1e-056
 Identities = 116/161 (72%), Positives = 123/161 (76%), Gaps = 13/161 (8%)
 Frame = -3

Query: 930 ESRVEPLEAENSKRSPRPGNTRAGKDYQVSGTNSEKQERRPRNKERPDRVVWTPRRSDGS 751
           E RVEP EAEN KR  RP NTRAGKDY  SGT SEKQERR RNK+RPDRV+W PRR DG 
Sbjct: 336 EQRVEPSEAENYKRPSRPANTRAGKDYHTSGTISEKQERRTRNKDRPDRVMWAPRR-DG- 393

Query: 750 SISEDQLSSSIANNGEVKERMLLQRSGEVVNSSGGHSLENGSTRHSGRRVGARNRKEEGF 571
             SEDQ  SS  NNGEVK+RM  QRSGEVVNSSGGH+LENGS RHS RRVG RNRKEE  
Sbjct: 394 --SEDQPLSSAGNNGEVKDRMFSQRSGEVVNSSGGHTLENGSARHSSRRVGGRNRKEE-- 449

Query: 570 AMTGEGKSSRRGGGGGGGGGGGGPNSHEKQMWIQKSSSGT* 448
            + GEGK+SRR       G GGGP+SHEKQMWIQK SSGT*
Sbjct: 450 VVIGEGKTSRR-------GSGGGPSSHEKQMWIQKPSSGT* 483

>TAIR9_protein||AT1G33980.2 | Symbols: ATUPF3, UPF3 | Smg-4/UPF3 family protein
        | chr1:12351719-12354401 FORWARD

          Length = 485

 Score =  216 bits (550), Expect = 1e-056
 Identities = 116/161 (72%), Positives = 123/161 (76%), Gaps = 13/161 (8%)
 Frame = -3

Query: 930 ESRVEPLEAENSKRSPRPGNTRAGKDYQVSGTNSEKQERRPRNKERPDRVVWTPRRSDGS 751
           E RVEP EAEN KR  RP NTRAGKDY  SGT SEKQERR RNK+RPDRV+W PRR DG 
Sbjct: 338 EQRVEPSEAENYKRPSRPANTRAGKDYHTSGTISEKQERRTRNKDRPDRVMWAPRR-DG- 395

Query: 750 SISEDQLSSSIANNGEVKERMLLQRSGEVVNSSGGHSLENGSTRHSGRRVGARNRKEEGF 571
             SEDQ  SS  NNGEVK+RM  QRSGEVVNSSGGH+LENGS RHS RRVG RNRKEE  
Sbjct: 396 --SEDQPLSSAGNNGEVKDRMFSQRSGEVVNSSGGHTLENGSARHSSRRVGGRNRKEE-- 451

Query: 570 AMTGEGKSSRRGGGGGGGGGGGGPNSHEKQMWIQKSSSGT* 448
            + GEGK+SRR       G GGGP+SHEKQMWIQK SSGT*
Sbjct: 452 VVIGEGKTSRR-------GSGGGPSSHEKQMWIQKPSSGT* 485

>TAIR9_protein||AT4G13340.1 | Symbols:  | leucine-rich repeat family protein /
        extensin family protein | chr4:7758610-7760892 FORWARD

          Length = 761

 Score =  48 bits (112), Expect = 9e-006
 Identities = 26/61 (42%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
 Frame = +2

Query: 503 PPPPPPPPPPPPLRDDLPSPVIAKPSSFLLRAPT----RRPECLVEPFSRECPPEEFTTS 670
           PPPPPPPPPPPP+    P PV + P      APT     RP     P     PP +F+  
Sbjct: 497 PPPPPPPPPPPPVYSPPPPPVYSSPPPPPSPAPTPVYCTRPP---PPPPHSPPPPQFSPP 553

Query: 671 P 673
           P
Sbjct: 554 P 554

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,248,867,085
Number of Sequences: 33410
Number of Extensions: 20248867085
Number of Successful Extensions: 647821861
Number of sequences better than 0.0: 0