BLASTX 7.6.2
Query= UN40713 /QuerySize=1543
(1542 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G04880.1 | Symbols: | high mobility group (HM... 416 3e-116
TAIR9_protein||AT1G76110.1 | Symbols: | high mobility group (HM... 119 6e-027
TAIR9_protein||AT1G55650.1 | Symbols: | high mobility group (HM... 106 4e-023
TAIR9_protein||AT3G13350.1 | Symbols: | high mobility group (HM... 100 3e-021
TAIR9_protein||AT4G02810.1 | Symbols: | unknown protein | chr4:... 56 5e-008
TAIR9_protein||AT5G03710.1 | Symbols: | unknown protein | chr5:... 56 6e-008
>TAIR9_protein||AT1G04880.1 | Symbols: | high mobility group (HMG1/2) family
protein / ARID/BRIGHT DNA-binding domain-containing protein |
chr1:1376106-1378264 REVERSE
Length = 449
Score = 416 bits (1067), Expect = 3e-116
Identities = 223/309 (72%), Positives = 250/309 (80%), Gaps = 26/309 (8%)
Frame = +2
Query: 629 RGGIRPPQELQALAFTPQPRIN----IGGVLNGASVIGVVDGKFEDGYLVTVTMGSEKLK 796
+G IRP QELQAL FTPQP+IN +GG L G++V+GV+DGKFE GYLVTVT+GSE+LK
Sbjct: 143 QGAIRPSQELQALTFTPQPKINTAEFLGGSLAGSNVVGVIDGKFESGYLVTVTIGSEQLK 202
Query: 797 GVLCQLVPENTVAAHQTPQQSHHGGFPNTWNNNGPYPQGVVTGGVRKRRRIRKKSEIKRR 976
GVL QL+P+NTV ++QTPQQS HG PNT N + PQG V GGV KRRR RKKSEIKRR
Sbjct: 203 GVLYQLLPQNTV-SYQTPQQS-HGVLPNTLNISA-NPQG-VAGGVTKRRRRRKKSEIKRR 258
Query: 977 DPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLNEQERLVYQGKAMED 1156
DP HPKPNRSGYNFFFAEQHARLKPLHPGKDR+ISRMIGELWNKLNE E+L+YQGKAMED
Sbjct: 259 DPDHPKPNRSGYNFFFAEQHARLKPLHPGKDRDISRMIGELWNKLNEDEKLIYQGKAMED 318
Query: 1157 KERYRTEMEDYREKLRTGQLISNAVPLQQRLPEQNVEIAEVPMEEAEEEEDEEEEEEEEE 1336
KERYRTEMEDYREK + GQLISNAVPLQQRLPEQNV++AE + +E E
Sbjct: 319 KERYRTEMEDYREKKKNGQLISNAVPLQQRLPEQNVDMAEADL-----------PIDEVE 367
Query: 1337 EEEEEGDSSGDSGESEPH------SDAEMEEPFLTPSGLNLNPNPSEIVVAPKEKASDVV 1498
E++EEGDSSG SGESEPH +D E+EEP L PSG NLNPNP+EIVVAPKEK D V
Sbjct: 368 EDDEEGDSSGSSGESEPHDDQSIETDPELEEPSLNPSGPNLNPNPTEIVVAPKEKNGD-V 426
Query: 1499 VMETSPGKK 1525
VMETSP KK
Sbjct: 427 VMETSPLKK 435
Score = 253 bits (645), Expect = 3e-067
Identities = 126/148 (85%), Positives = 134/148 (90%)
Frame = +1
Query: 205 ASSSCLKQGSVPMDNIRVTPEATYEAVVADPKLFMGSLERLHSRLGTKFMVPIIGGRDLD 384
ASSSCLKQGSVPM+N+ VTPEATYEAVVADP+LFM SLERLHS LGTKFMVPIIGGRDLD
Sbjct: 2 ASSSCLKQGSVPMNNVCVTPEATYEAVVADPRLFMTSLERLHSLLGTKFMVPIIGGRDLD 61
Query: 385 LHKLFVEVTSRGGINKILHERRCKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFF 564
LHKLFVEVTSRGGINKIL+ERR KEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFF
Sbjct: 62 LHKLFVEVTSRGGINKILNERRWKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFF 121
Query: 565 RSNSHIPPDSLHTPSGAPGLMQGGHKTS 648
RSN IPPDS+ +PS P +QG + S
Sbjct: 122 RSNGQIPPDSMQSPSARPCFIQGAIRPS 149
>TAIR9_protein||AT1G76110.1 | Symbols: | high mobility group (HMG1/2) family
protein / ARID/BRIGHT DNA-binding domain-containing protein |
chr1:28555287-28557465 REVERSE
Length = 339
Score = 119 bits (297), Expect = 6e-027
Identities = 59/111 (53%), Positives = 80/111 (72%), Gaps = 4/111 (3%)
Frame = +2
Query: 875 PNTWNNNGPYPQGVVTGGVRKRRRIRKKSEIKRR-DPAHPKPNRSGYNFFFAEQHARLKP 1051
P NN P V TG R+RRR+ K+ +RR DP +PKPNRSGYNFFFAE+H +LK
Sbjct: 219 PTAVLNNAVVPY-VETG--RRRRRLGKRRRSRRREDPNYPKPNRSGYNFFFAEKHCKLKS 275
Query: 1052 LHPGKDREISRMIGELWNKLNEQERLVYQGKAMEDKERYRTEMEDYREKLR 1204
L+P K+RE +++IGE W+ L+ +ER+VYQ ++DKERY+ E+ +YRE LR
Sbjct: 276 LYPNKEREFTKLIGESWSNLSTEERMVYQDIGLKDKERYQRELNEYRETLR 326
Score = 112 bits (279), Expect = 7e-025
Identities = 52/101 (51%), Positives = 73/101 (72%)
Frame = +1
Query: 262 PEATYEAVVADPKLFMGSLERLHSRLGTKFMVPIIGGRDLDLHKLFVEVTSRGGINKILH 441
P A +E VV D +F +L R HS + TKFM+P+IGG++LDLH L+VEVT RGG K++
Sbjct: 30 PLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGYEKVVV 89
Query: 442 ERRCKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFF 564
E++ +EV F F T T+AS+VLRK+Y +LL +YEQ++ F
Sbjct: 90 EKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLF 130
>TAIR9_protein||AT1G55650.1 | Symbols: | high mobility group (HMG1/2) family
protein / ARID/BRIGHT DNA-binding domain-containing protein |
chr1:20796340-20798481 FORWARD
Length = 338
Score = 106 bits (264), Expect = 4e-023
Identities = 47/99 (47%), Positives = 68/99 (68%)
Frame = +1
Query: 274 YEAVVADPKLFMGSLERLHSRLGTKFMVPIIGGRDLDLHKLFVEVTSRGGINKILHERRC 453
Y+ +V +P+LF L H KF +PI+GG+ LDLH+LF EVTSRGG+ K++ +RRC
Sbjct: 30 YQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRRC 89
Query: 454 KEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFFRS 570
KEV F F T TN+++VLRK Y +L +E +Y+F++
Sbjct: 90 KEVIDAFNFKTTITNSAFVLRKSYLKMLFEFEHLYYFQA 128
Score = 65 bits (157), Expect = 1e-010
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Frame = +2
Query: 941 RRIRKKSEIKRRDP-AHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLNE 1117
+R +KK++ + D PK R+GYNFF AEQ R+K + G+ + G +W L+E
Sbjct: 198 KRGKKKAKSSQGDSHKPPKRQRTGYNFFVAEQSVRIKAENAGQKVSSPKNFGNMWTNLSE 257
Query: 1118 QERLVYQGKAMEDKERYRTEMEDYREKLRT 1207
+R VY K+ ED +RY+ E+ YR + +
Sbjct: 258 SDRKVYYEKSREDGKRYKMEILQYRSLMES 287
>TAIR9_protein||AT3G13350.1 | Symbols: | high mobility group (HMG1/2) family
protein / ARID/BRIGHT DNA-binding domain-containing protein |
chr3:4335721-4337804 REVERSE
Length = 320
Score = 100 bits (248), Expect = 3e-021
Identities = 48/95 (50%), Positives = 66/95 (69%)
Frame = +2
Query: 938 RRRIRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLHPGKDREISRMIGELWNKLNE 1117
+RR RKKS++ D PK +RSGYNFFFAEQ+ARLKP + G++R I++ IG +W+ L E
Sbjct: 221 QRRHRKKSKLAVVDTQKPKCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMWSNLTE 280
Query: 1118 QERLVYQGKAMEDKERYRTEMEDYREKLRTGQLIS 1222
E+ VYQ K ++D ERYR EM +Y+ +G S
Sbjct: 281 SEKQVYQDKGVKDVERYRIEMLEYKSSHESGATAS 315
Score = 93 bits (229), Expect = 5e-019
Identities = 48/111 (43%), Positives = 64/111 (57%), Gaps = 3/111 (2%)
Frame = +1
Query: 238 PMDNIRV---TPEATYEAVVADPKLFMGSLERLHSRLGTKFMVPIIGGRDLDLHKLFVEV 408
P DN R + A Y+ +V + LF L VP +GG LDLH+LF+EV
Sbjct: 21 PSDNKRCDDSSVPAKYDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEV 80
Query: 409 TSRGGINKILHERRCKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYF 561
TSRGGI +++ +R+ KEV F FP T T+AS+VLRKYY L E +Y+
Sbjct: 81 TSRGGIERVVKDRKWKEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYY 131
>TAIR9_protein||AT4G02810.1 | Symbols: | unknown protein | chr4:1256253-1257068
FORWARD
Length = 272
Score = 56 bits (134), Expect = 5e-008
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Frame = +2
Query: 1019 FFAEQHARLKPLHPGKDREISRMIGELWNKLNEQERLVYQG-KAMEDKERYRTEMEDYRE 1195
F +++ PL+ SRM+ E RLV Q + + +E + R
Sbjct: 109 FMTRENSFPPPLNSVNGFNNSRMV----KSYKEDGRLVVQAIRVCSPPRCFVSERREGRL 164
Query: 1196 KLRTGQLISNAVPLQQRLPEQNVE---IAEVPMEEAEEEEDEEEEEEEEEEEEEEGDSSG 1366
+L Q N+ ++ E++ + AE EE EEEE+EEEEEEEEEEEEEE D G
Sbjct: 165 RLCLSQNSLNSQDAEEEFEEEDEDDQYDAEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEG 224
Query: 1367 DSGESE 1384
G +E
Sbjct: 225 IVGNNE 230
>TAIR9_protein||AT5G03710.1 | Symbols: | unknown protein | chr5:971107-971627
FORWARD
Length = 82
Score = 56 bits (133), Expect = 6e-008
Identities = 29/53 (54%), Positives = 33/53 (62%)
Frame = +2
Query: 1253 EQNVEIAEVPMEEAEEEEDEEEEEEEEEEEEEEGDSSGDSGESEPHSDAEMEE 1411
E+ E E EE EEEE+EEEEEEEEEEEEEE + + E E D E EE
Sbjct: 20 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDREREE 72
Score = 54 bits (128), Expect = 2e-007
Identities = 28/53 (52%), Positives = 33/53 (62%)
Frame = +2
Query: 1253 EQNVEIAEVPMEEAEEEEDEEEEEEEEEEEEEEGDSSGDSGESEPHSDAEMEE 1411
E+ E E EE EEEE+EEEEEEEEEEEEEE + + E E + E EE
Sbjct: 6 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 58
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,248,867,085
Number of Sequences: 33410
Number of Extensions: 20248867085
Number of Successful Extensions: 647821861
Number of sequences better than 0.0: 0
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