BLASTX 7.6.2
Query= UN40832 /QuerySize=986
(985 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297811333|ref|XP_002873550.1| hypothetical protein ARALYDRAFT... 414 1e-113
gi|15239879|ref|NP_196773.1| Ubiquitin-associated/translation el... 408 1e-111
gi|297822273|ref|XP_002879019.1| ubiquitin-associated /TS-N doma... 86 6e-015
gi|255569177|ref|XP_002525557.1| conserved hypothetical protein ... 78 2e-012
gi|224104549|ref|XP_002313475.1| predicted protein [Populus tric... 69 8e-010
gi|15225819|ref|NP_180260.1| Ubiquitin-associated/translation el... 65 1e-008
gi|224058920|ref|XP_002299651.1| predicted protein [Populus tric... 65 1e-008
gi|255564442|ref|XP_002523217.1| conserved hypothetical protein ... 62 2e-007
>gi|297811333|ref|XP_002873550.1| hypothetical protein ARALYDRAFT_488055
[Arabidopsis lyrata subsp. lyrata]
Length = 611
Score = 414 bits (1063), Expect = 1e-113
Identities = 213/293 (72%), Positives = 241/293 (82%), Gaps = 10/293 (3%)
Frame = +2
Query: 2 GESGNQSVNPMDKINMRMELMKMQQNAAIEEKKRMSYQPTPLQRPTEGPHYVAALGDHHF 181
GES NQSVN +++I+M+++ MK+QQNA +EE KR+ YQ TPL R TE HYVAA GD +
Sbjct: 323 GESENQSVNSLERIHMKLQWMKLQQNATVEENKRIPYQQTPLSRSTEETHYVAAQGD-QY 381
Query: 182 KRVQQQEMREPVTVM--QQQHQRSQSAKANVLPVSTINSSFTVAATAAAGGSGWYPANRS 355
KR+QQQ+MREPV VM QQQ QRSQSA NVLPVST+N+SFT A AAA GSGWYPANRS
Sbjct: 382 KRLQQQDMREPVMVMQQQQQQQRSQSANTNVLPVSTMNASFTGA--AAAAGSGWYPANRS 439
Query: 356 EVAQSNGYLPTRTLPPTDLNPNLMYQQQLQYQQYQGQM-NNGHRMAGASSPHTVAPAASL 532
E QSNGYLP+R+LPP DLN NLMY QQLQYQQYQGQ+ NN HRMAGAS+P VAPAASL
Sbjct: 440 EAGQSNGYLPSRSLPPNDLNSNLMY-QQLQYQQYQGQVNNNSHRMAGASAPLAVAPAASL 498
Query: 533 GLFSGYGS---TPSS*LEWSTDGSAAKSDYNNIDWSLDRGLACPRPNQQQYMEASPYETN 703
GLFSG+GS + SS L+W+ DGS DYNNIDWSLD+GLACPRP+QQ +SPYE +
Sbjct: 499 GLFSGFGSLAGSSSSGLDWNADGSLGHLDYNNIDWSLDKGLACPRPSQQYVAASSPYEAH 558
Query: 704 MNGRTRMMGNGNGMSMAMGAQEAALVGNGREWTSPFEGKDLFSLSRQYVPPSL 862
MNGRTR + NGNGM MAMG QEAALVGNGREWTSPFEGKDLFSLSRQYVPPSL
Sbjct: 559 MNGRTRTLANGNGMGMAMGVQEAALVGNGREWTSPFEGKDLFSLSRQYVPPSL 611
>gi|15239879|ref|NP_196773.1| Ubiquitin-associated/translation elongation factor
EF1B protein [Arabidopsis thaliana]
Length = 619
Score = 408 bits (1046), Expect = 1e-111
Identities = 216/302 (71%), Positives = 245/302 (81%), Gaps = 21/302 (6%)
Frame = +2
Query: 2 GESGNQSVNPMDKINMRMELMKMQQNAAIEEKKRMSYQPTPLQRPTEGPHYVAALGDHHF 181
GES NQSVN +++I+M+++ MK+QQNA +EE KR+ YQ TPL R TE HYV ALGD F
Sbjct: 324 GESENQSVNSLERIHMKLQWMKLQQNAPLEENKRIPYQQTPLSRSTEETHYVTALGD-QF 382
Query: 182 KRVQQQEMREPVTVM---QQQHQRSQSAKANVLPVSTINSSFTVAATAAAGGSGWYPANR 352
KR+QQQ+MREPV VM QQQ QRSQSA NVLPVST+N+SFT AAA GSGW+PANR
Sbjct: 383 KRLQQQDMREPVMVMQQQQQQQQRSQSANTNVLPVSTMNASFT---GAAAAGSGWHPANR 439
Query: 353 SEVAQSNGYLPTRTLPPTDLNPNLMYQQQLQYQQYQGQM-NNGHRMAGASSPHTVAPAAS 529
SE AQSNGYLP+R+LPP DLN NLMY QQLQYQQYQGQ+ NNGHRMAG+S+P VAPAAS
Sbjct: 440 SEAAQSNGYLPSRSLPPNDLNSNLMY-QQLQYQQYQGQVNNNGHRMAGSSAPPAVAPAAS 498
Query: 530 LGLFSGYGS---TPSS*LEWSTDGSAAKSDYNNIDWSLDRGLACPRPNQQQYMEA----- 685
LGLFSG+GS + SS L+W+TDGS DYNNIDWSLD+GLAC RP+ QQY+ A
Sbjct: 499 LGLFSGFGSLAGSSSSGLDWNTDGSLGHLDYNNIDWSLDKGLACVRPS-QQYVAASSPYS 557
Query: 686 ---SPYETNMNGRTRMMGNGNGMSMAMGAQEAALVGNGREWTSPFEGKDLFSLSRQYVPP 856
SPYE +MNGRTRMM NGNGM +AMG QEAALVGNGREWTSPFEGKDLFSLSRQYVPP
Sbjct: 558 AASSPYEAHMNGRTRMMTNGNGMGVAMGVQEAALVGNGREWTSPFEGKDLFSLSRQYVPP 617
Query: 857 SL 862
SL
Sbjct: 618 SL 619
>gi|297822273|ref|XP_002879019.1| ubiquitin-associated /TS-N domain-containing
protein [Arabidopsis lyrata subsp. lyrata]
Length = 641
Score = 86 bits (212), Expect = 6e-015
Identities = 58/149 (38%), Positives = 78/149 (52%), Gaps = 24/149 (16%)
Frame = +2
Query: 470 NNGHRMAGASSPHTVAPAASLGLFSGYGST----PSS*LEWSTDGSAAKSDYNNIDWSLD 637
N G +S ++ A+SLGLFS GS SS ++W + GS DY +IDWSLD
Sbjct: 499 NGGSWTRNTASSPPISAASSLGLFSAVGSAGTSGASSPVDWISGGSV---DYTSIDWSLD 555
Query: 638 RGLACPRPNQQQYMEASP-YETNM-------------NGRTRMMGNGNGMSMAMGAQEAA 775
+GL+ N +S Y+ NM N + G+S+ + Q+AA
Sbjct: 556 QGLSQNSRNWSGSKSSSHIYDANMSRYSPNGSMGGRVNNSNSVSMENAGLSVVVETQQAA 615
Query: 776 LVGNGREWTSPFEGKDLFSLSRQYVPPSL 862
++WTSPFEGKD+FSLSRQYV PSL
Sbjct: 616 ---TSQDWTSPFEGKDIFSLSRQYVSPSL 641
>gi|255569177|ref|XP_002525557.1| conserved hypothetical protein [Ricinus
communis]
Length = 626
Score = 78 bits (191), Expect = 2e-012
Identities = 51/128 (39%), Positives = 76/128 (59%), Gaps = 9/128 (7%)
Frame = +2
Query: 485 MAGASSPHTVAPAASLGLFSGYGST---PSS*LEWSTDGSAAKSDYNNIDWSLDRGLACP 655
+A SSP AP +SLGLF+G GS+ +S ++W+ GS + DY +IDW+LD L+
Sbjct: 497 IASVSSPSLAAP-SSLGLFTGVGSSGTLGTSHVDWNNGGSMPEFDYTSIDWTLDTNLSSS 555
Query: 656 RPNQQQYMEASPYETNMNG-RTRMMGNG--NGMSMAMGAQEAALVGNGREWTSPFEGKDL 826
+ + ++ S ++ +G R M + +G+ A A+E A REWTSPF GKD+
Sbjct: 556 K--RGLWLGLSSLLSDRSGARMNSMNSSCISGLREAGAAKEMASSVGLREWTSPFAGKDI 613
Query: 827 FSLSRQYV 850
FSL RQ+V
Sbjct: 614 FSLPRQFV 621
>gi|224104549|ref|XP_002313475.1| predicted protein [Populus trichocarpa]
Length = 656
Score = 69 bits (168), Expect = 8e-010
Identities = 38/62 (61%), Positives = 46/62 (74%), Gaps = 6/62 (9%)
Frame = +2
Query: 488 AGASSPHTVAPAASLGLFSGYGST----PSS*LEWSTDGSAAKSDYNNIDWSLDRGLACP 655
AGAS ++A A+SLGLFSG GST SS ++WST GS A+ DY +IDWSLDRGL+ P
Sbjct: 504 AGASP--SLAAASSLGLFSGLGSTGSSGASSPVDWSTSGSMAQLDYTSIDWSLDRGLSSP 561
Query: 656 RP 661
RP
Sbjct: 562 RP 563
>gi|15225819|ref|NP_180260.1| Ubiquitin-associated/translation elongation factor
EF1B protein [Arabidopsis thaliana]
Length = 646
Score = 65 bits (158), Expect = 1e-008
Identities = 45/129 (34%), Positives = 62/129 (48%), Gaps = 11/129 (8%)
Frame = +2
Query: 488 AGASSPHTVAPAASLGLFSGYGSTPSS*LEWSTDGSAAKSDYNNIDWSLDRGLACPRPNQ 667
+ S T ++ + SG GS + ++WS D S +++ N +WS GL
Sbjct: 525 SAVGSAGTSGASSPIDWISG-GSVDYTNIDWSLDQSLSQNSRVNGNWS---GLKSSSQIY 580
Query: 668 QQYMEASPYETNMNGRTRMMGNGNGMSMAMGAQ----EAALVGNGREWTSPFEGKDLFSL 835
+ M +M GR + N NG+SM E +WTSPFEGKD+FSL
Sbjct: 581 DENMNRYSLNGSMGGR---LNNSNGVSMENSGAGVIVETQQAATSPDWTSPFEGKDIFSL 637
Query: 836 SRQYVPPSL 862
SRQYV PSL
Sbjct: 638 SRQYVSPSL 646
>gi|224058920|ref|XP_002299651.1| predicted protein [Populus trichocarpa]
Length = 652
Score = 65 bits (157), Expect = 1e-008
Identities = 36/62 (58%), Positives = 45/62 (72%), Gaps = 6/62 (9%)
Frame = +2
Query: 488 AGASSPHTVAPAASLGLFSGYGSTPS----S*LEWSTDGSAAKSDYNNIDWSLDRGLACP 655
AGAS ++A A+SLGLFSG GST S S ++WST GS + DY +IDWSL+RGL+ P
Sbjct: 509 AGASP--SLAAASSLGLFSGLGSTGSSGATSPVDWSTSGSMEQLDYTSIDWSLNRGLSSP 566
Query: 656 RP 661
RP
Sbjct: 567 RP 568
>gi|255564442|ref|XP_002523217.1| conserved hypothetical protein [Ricinus
communis]
Length = 663
Score = 62 bits (148), Expect = 2e-007
Identities = 40/99 (40%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Frame = +2
Query: 509 TVAPAASLGLFSGYG-----STPSS*LEWSTDGSAAKSDYNNIDWSLDRGLACPRPNQQQ 673
T+A A+SLGLFSG G S +S ++WST GS A+ DY +IDWSLDRGL+ P N
Sbjct: 524 TLAAASSLGLFSGLGGLAGSSGATSPVDWSTAGSMAQLDYTSIDWSLDRGLSSPSHNGLW 583
Query: 674 YMEASPYETNMNGRTRMMGNGNGMSMAMGAQEAALVGNG 790
S + T+M + A A GNG
Sbjct: 584 LGSGS-----LKNNTQMYDSSTSALGAKLTMRTAASGNG 617
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,587,916,767,856
Number of Sequences: 15229318
Number of Extensions: 4587916767856
Number of Successful Extensions: 1071853064
Number of sequences better than 0.0: 0
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