BLASTX 7.6.2
Query= UN40936 /QuerySize=1032
(1031 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G46280.1 | Symbols: TRIP-1, TIF3I1 | TRIP-1 (T... 119 5e-027
TAIR9_protein||AT2G46280.2 | Symbols: TRIP-1, TIF3I1 | TRIP-1 (T... 119 5e-027
TAIR9_protein||AT2G46290.1 | Symbols: | eukaryotic translation ... 112 4e-025
TAIR9_protein||AT2G19640.1 | Symbols: ASHR2, SDG39 | ASHR2 (ASH1... 98 9e-021
TAIR9_protein||AT2G19640.2 | Symbols: ASHR2 | ASHR2 (ASH1-RELATE... 98 9e-021
TAIR9_protein||AT2G46280.3 | Symbols: TRIP-1, TIF3I1 | TRIP-1 (T... 87 2e-017
>TAIR9_protein||AT2G46280.1 | Symbols: TRIP-1, TIF3I1 | TRIP-1 (TGF-BETA
RECEPTOR INTERACTING PROTEIN 1); nucleotide binding / protein binding |
chr2:19003656-19005393 REVERSE
Length = 329
Score = 119 bits (296), Expect = 5e-027
Identities = 64/87 (73%), Positives = 68/87 (78%), Gaps = 3/87 (3%)
Frame = +2
Query: 422 HKNTITSLTKAADDSHFITGSLDKTAKLWDMGTLTLLKTYVSGVPVNAVSTS---*PCCA 592
HK ITSL KAADDSHF+TGSLDKTAKLWDM TLTLLKTY + VPVNAVS S
Sbjct: 192 HKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVVPVNAVSLSPLLNHVVL 251
Query: 593 WRW*DAAAVTTTDHRAGKFEAKFYDKV 673
DA+AVTTTDHRAGKFEAKFYDK+
Sbjct: 252 GGGQDASAVTTTDHRAGKFEAKFYDKI 278
Score = 56 bits (134), Expect = 3e-008
Identities = 25/40 (62%), Positives = 35/40 (87%)
Frame = +3
Query: 288 QQLFSFKFGSPARSVDFALGDKVAVITTDPFMERISAITV 407
++LF+FKF +P RSVDFA+GD++AVITTD F++R +AI V
Sbjct: 85 KELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTAAIHV 124
>TAIR9_protein||AT2G46280.2 | Symbols: TRIP-1, TIF3I1 | TRIP-1 (TGF-BETA
RECEPTOR INTERACTING PROTEIN 1); nucleotide binding / protein binding |
chr2:19003656-19005393 REVERSE
Length = 329
Score = 119 bits (296), Expect = 5e-027
Identities = 64/87 (73%), Positives = 68/87 (78%), Gaps = 3/87 (3%)
Frame = +2
Query: 422 HKNTITSLTKAADDSHFITGSLDKTAKLWDMGTLTLLKTYVSGVPVNAVSTS---*PCCA 592
HK ITSL KAADDSHF+TGSLDKTAKLWDM TLTLLKTY + VPVNAVS S
Sbjct: 192 HKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVVPVNAVSLSPLLNHVVL 251
Query: 593 WRW*DAAAVTTTDHRAGKFEAKFYDKV 673
DA+AVTTTDHRAGKFEAKFYDK+
Sbjct: 252 GGGQDASAVTTTDHRAGKFEAKFYDKI 278
Score = 56 bits (134), Expect = 3e-008
Identities = 25/40 (62%), Positives = 35/40 (87%)
Frame = +3
Query: 288 QQLFSFKFGSPARSVDFALGDKVAVITTDPFMERISAITV 407
++LF+FKF +P RSVDFA+GD++AVITTD F++R +AI V
Sbjct: 85 KELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTAAIHV 124
>TAIR9_protein||AT2G46290.1 | Symbols: | eukaryotic translation initiation
factor 3 subunit 2, putative / eIF-3 beta, putative / eIF3i, putative |
chr2:19005910-19007797 REVERSE
Length = 356
Score = 112 bits (279), Expect = 4e-025
Identities = 60/87 (68%), Positives = 66/87 (75%), Gaps = 3/87 (3%)
Frame = +2
Query: 422 HKNTITSLTKAADDSHFITGSLDKTAKLWDMGTLTLLKTYVSGVPVNAVSTS---*PCCA 592
HK ITSL KAADDSHF+TGS DKTAKLWDM TLTL+KTY + VPVNAV+ S
Sbjct: 219 HKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTYTTVVPVNAVAMSPLLNHVVL 278
Query: 593 WRW*DAAAVTTTDHRAGKFEAKFYDKV 673
DA+AVTTTDHRAGKFEAKFYD +
Sbjct: 279 GGGQDASAVTTTDHRAGKFEAKFYDTI 305
Score = 55 bits (130), Expect = 8e-008
Identities = 26/40 (65%), Positives = 34/40 (85%)
Frame = +3
Query: 288 QQLFSFKFGSPARSVDFALGDKVAVITTDPFMERISAITV 407
++LF+FKFG+PARSVDF++GD +AVITTD F+ SAI V
Sbjct: 112 KELFTFKFGAPARSVDFSVGDHLAVITTDHFVGTSSAIHV 151
>TAIR9_protein||AT2G19640.1 | Symbols: ASHR2, SDG39 | ASHR2 (ASH1-RELATED
PROTEIN 2) | chr2:8491401-8492502 FORWARD
Length = 342
Score = 98 bits (242), Expect = 9e-021
Identities = 45/54 (83%), Positives = 49/54 (90%), Gaps = 1/54 (1%)
Frame = +1
Query: 136 YCDHYFRLLSQSS-QRCQSCSLVSFCSPNCISSHTPWLCESLRRLHQSSSSANS 294
YCDH FRLL+ S+ Q+CQSCSLVSFCSPNC +SHTPWLCESLRRLHQSSSSA S
Sbjct: 59 YCDHCFRLLASSAHQKCQSCSLVSFCSPNCFASHTPWLCESLRRLHQSSSSAFS 112
>TAIR9_protein||AT2G19640.2 | Symbols: ASHR2 | ASHR2 (ASH1-RELATED PROTEIN 2) |
chr2:8491401-8492597 FORWARD
Length = 399
Score = 98 bits (242), Expect = 9e-021
Identities = 45/54 (83%), Positives = 49/54 (90%), Gaps = 1/54 (1%)
Frame = +1
Query: 136 YCDHYFRLLSQSS-QRCQSCSLVSFCSPNCISSHTPWLCESLRRLHQSSSSANS 294
YCDH FRLL+ S+ Q+CQSCSLVSFCSPNC +SHTPWLCESLRRLHQSSSSA S
Sbjct: 59 YCDHCFRLLASSAHQKCQSCSLVSFCSPNCFASHTPWLCESLRRLHQSSSSAFS 112
>TAIR9_protein||AT2G46280.3 | Symbols: TRIP-1, TIF3I1 | TRIP-1 (TGF-BETA
RECEPTOR INTERACTING PROTEIN 1); nucleotide binding / protein binding |
chr2:19004179-19005393 REVERSE
Length = 255
Score = 87 bits (214), Expect = 2e-017
Identities = 43/52 (82%), Positives = 45/52 (86%)
Frame = +2
Query: 422 HKNTITSLTKAADDSHFITGSLDKTAKLWDMGTLTLLKTYVSGVPVNAVSTS 577
HK ITSL KAADDSHF+TGSLDKTAKLWDM TLTLLKTY + VPVNAVS S
Sbjct: 192 HKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYTTVVPVNAVSLS 243
Score = 56 bits (134), Expect = 3e-008
Identities = 25/40 (62%), Positives = 35/40 (87%)
Frame = +3
Query: 288 QQLFSFKFGSPARSVDFALGDKVAVITTDPFMERISAITV 407
++LF+FKF +P RSVDFA+GD++AVITTD F++R +AI V
Sbjct: 85 KELFTFKFNAPTRSVDFAVGDRLAVITTDHFVDRTAAIHV 124
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,337,905,103
Number of Sequences: 33410
Number of Extensions: 20337905103
Number of Successful Extensions: 647909322
Number of sequences better than 0.0: 0
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