BLASTX 7.6.2
Query= UN40940 /QuerySize=542
(541 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G07070.1 | Symbols: | 60S ribosomal protein L... 223 5e-059
TAIR9_protein||AT1G74270.1 | Symbols: | 60S ribosomal protein L... 221 2e-058
TAIR9_protein||AT1G41880.1 | Symbols: | 60S ribosomal protein L... 216 1e-056
TAIR9_protein||AT3G55750.1 | Symbols: | 60S ribosomal protein L... 215 1e-056
>TAIR9_protein||AT1G07070.1 | Symbols: | 60S ribosomal protein L35a (RPL35aA) |
chr1:2168652-2169703 FORWARD
Length = 113
Score = 223 bits (568), Expect = 5e-059
Identities = 106/113 (93%), Positives = 109/113 (96%)
Frame = +2
Query: 47 MVKGRQGERVRLYVRGTILGYKRWKSNQYPNTSLIQIEGVNTTEEVTWYKGKRMAYIYKA 226
MVKGRQGERVRLYVRGTILGYKR KSNQYPNTSL+Q+EGVNTTEEV+WYKGKRMAYIYKA
Sbjct: 1 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKA 60
Query: 227 KTKKNGSLYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGMRVRVFMYPSNI* 385
KTKKNGS YRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMG RVRVFMYPSNI*
Sbjct: 61 KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI* 113
>TAIR9_protein||AT1G74270.1 | Symbols: | 60S ribosomal protein L35a (RPL35aC) |
chr1:27928415-27929466 REVERSE
Length = 113
Score = 221 bits (562), Expect = 2e-058
Identities = 106/113 (93%), Positives = 107/113 (94%)
Frame = +2
Query: 47 MVKGRQGERVRLYVRGTILGYKRWKSNQYPNTSLIQIEGVNTTEEVTWYKGKRMAYIYKA 226
MVKGRQGERVRLYVRGTILGYKR KSNQYPNTSL+QIEGVNT EEV WYKGKRMAYIYKA
Sbjct: 1 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKA 60
Query: 227 KTKKNGSLYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGMRVRVFMYPSNI* 385
KTKKNGS YRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMG RVRVFMYPSNI*
Sbjct: 61 KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI* 113
>TAIR9_protein||AT1G41880.1 | Symbols: | 60S ribosomal protein L35a (RPL35aB) |
chr1:15651585-15652427 REVERSE
Length = 112
Score = 216 bits (548), Expect = 1e-056
Identities = 102/112 (91%), Positives = 106/112 (94%)
Frame = +2
Query: 50 VKGRQGERVRLYVRGTILGYKRWKSNQYPNTSLIQIEGVNTTEEVTWYKGKRMAYIYKAK 229
+KGRQGERVRLYVRGT+LGYKR KSNQYPNTSLIQIEGVNT EEV WYKGKR+AYIYKAK
Sbjct: 1 MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAK 60
Query: 230 TKKNGSLYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGMRVRVFMYPSNI* 385
TKKNGS YRCIWGKVTRPHGNSGVVR+KFTSNLPPKSMG RVRVFMYPSNI*
Sbjct: 61 TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI* 112
>TAIR9_protein||AT3G55750.1 | Symbols: | 60S ribosomal protein L35a (RPL35aD) |
chr3:20698641-20699553 FORWARD
Length = 112
Score = 215 bits (547), Expect = 1e-056
Identities = 101/112 (90%), Positives = 106/112 (94%)
Frame = +2
Query: 50 VKGRQGERVRLYVRGTILGYKRWKSNQYPNTSLIQIEGVNTTEEVTWYKGKRMAYIYKAK 229
+KGRQGERVRLYVRGT+LGYKR KSNQYPNTSL+QIEGVNT EEV WYKGKR+AYIYKAK
Sbjct: 1 MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAK 60
Query: 230 TKKNGSLYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGMRVRVFMYPSNI* 385
TKKNGS YRCIWGKVTRPHGNSGVVR+KFTSNLPPKSMG RVRVFMYPSNI*
Sbjct: 61 TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI* 112
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,337,905,103
Number of Sequences: 33410
Number of Extensions: 20337905103
Number of Successful Extensions: 647909322
Number of sequences better than 0.0: 0
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