BLASTX 7.6.2
Query= UN40952 /QuerySize=1086
(1085 letters)
Database: UniProt/TrEMBL;
11,397,958 sequences; 3,661,877,547 total letters
Score E
Sequences producing significant alignments: (bits) Value
tr|Q9LTK0|Q9LTK0_ARATH AT5g52200/F17P19_10 OS=Arabidopsis thalia... 120 3e-025
tr|Q8LCY0|Q8LCY0_ARATH Putative HMG protein OS=Arabidopsis thali... 94 3e-017
tr|B9DG70|B9DG70_ARATH AT2G17560 protein OS=Arabidopsis thaliana... 93 4e-017
tr|Q42344|Q42344_ARATH HMG1-like protein OS=Arabidopsis thaliana... 93 4e-017
tr|Q94K96|Q94K96_ARATH Putative HMG protein OS=Arabidopsis thali... 93 4e-017
tr|O49598|O49598_ARATH HMG protein OS=Arabidopsis thaliana GN=HM... 91 3e-016
tr|O49597|O49597_ARATH AT4G35570 protein OS=Arabidopsis thaliana... 77 4e-012
tr|Q40094|Q40094_IPONI High mobility group protein 2 HMG2 OS=Ipo... 69 1e-009
tr|D4P597|D4P597_GOSHI High mobility group box 3 protein OS=Goss... 68 2e-009
tr|Q41026|Q41026_PEA HMG 1 protein OS=Pisum sativum PE=2 SV=1 67 2e-009
tr|A9NY59|A9NY59_PICSI Putative uncharacterized protein OS=Picea... 67 3e-009
tr|B9HSP8|B9HSP8_POPTR High mobility group family OS=Populus tri... 66 7e-009
tr|O04692|O04692_TOBAC DNA-binding protein OS=Nicotiana tabacum ... 66 7e-009
tr|C6SVP1|C6SVP1_SOYBN Putative uncharacterized protein OS=Glyci... 65 9e-009
tr|Q676W2|Q676W2_HYAOR HMG transcription factor (Fragment) OS=Hy... 65 9e-009
tr|Q1EMR5|Q1EMR5_PLAMJ HMG-protein (Fragment) OS=Plantago major ... 65 1e-008
>tr|Q9LTK0|Q9LTK0_ARATH AT5g52200/F17P19_10 OS=Arabidopsis thaliana GN=At5g52200
PE=1 SV=1
Length = 191
Score = 120 bits (300), Expect = 3e-025
Identities = 74/128 (57%), Positives = 88/128 (68%), Gaps = 4/128 (3%)
Frame = +1
Query: 502 DMQRAAELRIVLNQPAAALSSRHTNLGSGSGGWSSS-*EKDEVDPMDQDDEDGDGEKNAR 678
DMQRA ELR VLN AAA SSR+++ GSG GGWSSS E++E DPMDQD+E KN R
Sbjct: 59 DMQRAEELRNVLND-AAASSSRNSSQGSGGGGWSSSDEEEEEADPMDQDEEGSGSGKNER 117
Query: 679 FNEHRRVHYNEFW*VKELRSSG*QSRSM*KKRKKMMAKGSKSEATTSRHTTKDVNK*LNA 858
FN HR+ HY+EF VKELRSSG S ++ + AKGSKSE TT+ TK NK L+A
Sbjct: 118 FNAHRKAHYDEFRKVKELRSSG--SFYEEEEEEDDGAKGSKSETTTNSRHTKGGNKELDA 175
Query: 859 TTRVSSSS 882
T VS +S
Sbjct: 176 TKTVSGTS 183
>tr|Q8LCY0|Q8LCY0_ARATH Putative HMG protein OS=Arabidopsis thaliana PE=2 SV=1
Length = 138
Score = 94 bits (231), Expect = 3e-017
Identities = 47/64 (73%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Frame = +2
Query: 92 GETKFEATSTNQRLKTRGRKKKTKTTTKDPNKPKRPPSAFFVFLDDFRREFNEVNPNTKL 271
GE+K EATST+QRLKTRGRK K T KDPN+PKRPPSAFFVFL+DFR+EFN NPN K
Sbjct: 4 GESKAEATSTDQRLKTRGRKAGNK-TKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKS 62
Query: 272 VRLV 283
V V
Sbjct: 63 VATV 66
Score = 69 bits (167), Expect = 8e-010
Identities = 29/42 (69%), Positives = 38/42 (90%)
Frame = +1
Query: 268 VGKAGGAKWESMTEEEKAPYASKAEGRKSEYAKSMQQYNMKL 393
VGKA GA+W+SMT+E+KAPY +KAE RK+EY K++QQYN+KL
Sbjct: 66 VGKAAGARWKSMTDEDKAPYVAKAESRKTEYIKNVQQYNLKL 107
>tr|B9DG70|B9DG70_ARATH AT2G17560 protein OS=Arabidopsis thaliana GN=At2g17560
PE=2 SV=1
Length = 134
Score = 93 bits (230), Expect = 4e-017
Identities = 47/64 (73%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Frame = +2
Query: 92 GETKFEATSTNQRLKTRGRKKKTKTTTKDPNKPKRPPSAFFVFLDDFRREFNEVNPNTKL 271
GE+K EATST+QRLKTRGR K K T KDPN+PKRPPSAFFVFL+DFR+EFN NPN K
Sbjct: 4 GESKAEATSTDQRLKTRGR-KAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKS 62
Query: 272 VRLV 283
V V
Sbjct: 63 VATV 66
Score = 68 bits (164), Expect = 2e-009
Identities = 28/42 (66%), Positives = 38/42 (90%)
Frame = +1
Query: 268 VGKAGGAKWESMTEEEKAPYASKAEGRKSEYAKSMQQYNMKL 393
VGKA GA+W++MT+E+KAPY +KAE RK+EY K++QQYN+KL
Sbjct: 66 VGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKL 107
>tr|Q42344|Q42344_ARATH HMG1-like protein OS=Arabidopsis thaliana GN=At2g17560
PE=2 SV=1
Length = 138
Score = 93 bits (230), Expect = 4e-017
Identities = 47/64 (73%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Frame = +2
Query: 92 GETKFEATSTNQRLKTRGRKKKTKTTTKDPNKPKRPPSAFFVFLDDFRREFNEVNPNTKL 271
GE+K EATST+QRLKTRGR K K T KDPN+PKRPPSAFFVFL+DFR+EFN NPN K
Sbjct: 4 GESKAEATSTDQRLKTRGR-KAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKS 62
Query: 272 VRLV 283
V V
Sbjct: 63 VATV 66
Score = 68 bits (164), Expect = 2e-009
Identities = 28/42 (66%), Positives = 38/42 (90%)
Frame = +1
Query: 268 VGKAGGAKWESMTEEEKAPYASKAEGRKSEYAKSMQQYNMKL 393
VGKA GA+W++MT+E+KAPY +KAE RK+EY K++QQYN+KL
Sbjct: 66 VGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKL 107
>tr|Q94K96|Q94K96_ARATH Putative HMG protein OS=Arabidopsis thaliana
GN=At2g17560 PE=1 SV=1
Length = 138
Score = 93 bits (230), Expect = 4e-017
Identities = 47/64 (73%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Frame = +2
Query: 92 GETKFEATSTNQRLKTRGRKKKTKTTTKDPNKPKRPPSAFFVFLDDFRREFNEVNPNTKL 271
GE+K EATST+QRLKTRGR K K T KDPN+PKRPPSAFFVFL+DFR+EFN NPN K
Sbjct: 4 GESKAEATSTDQRLKTRGR-KAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKS 62
Query: 272 VRLV 283
V V
Sbjct: 63 VATV 66
>tr|O49598|O49598_ARATH HMG protein OS=Arabidopsis thaliana GN=HMGgamma PE=2
SV=1
Length = 138
Score = 91 bits (223), Expect = 3e-016
Identities = 46/64 (71%), Positives = 51/64 (79%), Gaps = 1/64 (1%)
Frame = +2
Query: 92 GETKFEATSTNQRLKTRGRKKKTKTTTKDPNKPKRPPSAFFVFLDDFRREFNEVNPNTKL 271
GE+K ATST+QRLKTRGR K K T KDPN+PKRPPSAFFVFL+DFR+EFN NPN K
Sbjct: 4 GESKAGATSTDQRLKTRGR-KAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKS 62
Query: 272 VRLV 283
V V
Sbjct: 63 VATV 66
Score = 69 bits (167), Expect = 8e-010
Identities = 29/42 (69%), Positives = 38/42 (90%)
Frame = +1
Query: 268 VGKAGGAKWESMTEEEKAPYASKAEGRKSEYAKSMQQYNMKL 393
VGKA GA+W+SMT+E+KAPY +KAE RK+EY K++QQYN+KL
Sbjct: 66 VGKAAGARWKSMTDEDKAPYVAKAESRKTEYIKNVQQYNLKL 107
>tr|O49597|O49597_ARATH AT4G35570 protein OS=Arabidopsis thaliana GN=HMGdelta
PE=2 SV=1
Length = 125
Score = 77 bits (187), Expect = 4e-012
Identities = 37/60 (61%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
Frame = +2
Query: 95 ETKFEATSTNQRLKTRGRKKKTKTTTKDPNKPKRPPSAFFVFLDDFRREFNEVNPNTKLV 274
+T+ E+ ST+ RLK RG K K TKDPN+PK+PPS FFVFLDDFR+EFN NP+ K V
Sbjct: 5 QTEVESRSTDDRLKVRGNKVGKK--TKDPNRPKKPPSPFFVFLDDFRKEFNLANPDNKSV 62
>tr|Q40094|Q40094_IPONI High mobility group protein 2 HMG2 OS=Ipomoea nil PE=2
SV=1
Length = 146
Score = 69 bits (166), Expect = 1e-009
Identities = 40/78 (51%), Positives = 50/78 (64%), Gaps = 5/78 (6%)
Frame = +2
Query: 101 KFEATSTNQ-RLKTRG-RKKKTKTTTKDPNKPKRPPSAFFVFLDDFRREFNEVNPNTKLV 274
K +A S N+ +K RG KK+K + KDPNKPKRPPSAFFVF++DFR+ + E +PN K V
Sbjct: 5 KSKAKSDNKLAVKKRGCETKKSKKSVKDPNKPKRPPSAFFVFMEDFRKTYKEKHPNNKSV 64
Query: 275 RLVELNGSQ*LRKRKHLT 328
V G K K LT
Sbjct: 65 AAVGKAGGD---KWKQLT 79
>tr|D4P597|D4P597_GOSHI High mobility group box 3 protein OS=Gossypium hirsutum
PE=2 SV=1
Length = 129
Score = 68 bits (164), Expect = 2e-009
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = +1
Query: 268 VGKAGGAKWESMTEEEKAPYASKAEGRKSEYAKSMQQYNMKL 393
VGKAGG KW+SMT+ EKAPY KAE RKSEY K MQ YN+KL
Sbjct: 59 VGKAGGEKWKSMTDAEKAPYVQKAEKRKSEYNKKMQAYNLKL 100
>tr|Q41026|Q41026_PEA HMG 1 protein OS=Pisum sativum PE=2 SV=1
Length = 154
Score = 67 bits (163), Expect = 2e-009
Identities = 31/41 (75%), Positives = 35/41 (85%)
Frame = +1
Query: 268 VGKAGGAKWESMTEEEKAPYASKAEGRKSEYAKSMQQYNMK 390
VGKA GAKW+SMTE EKAPYA+KAE RK+EY KSM+ YN K
Sbjct: 76 VGKAAGAKWKSMTEAEKAPYAAKAEKRKAEYEKSMKSYNKK 116
>tr|A9NY59|A9NY59_PICSI Putative uncharacterized protein OS=Picea sitchensis
PE=2 SV=1
Length = 151
Score = 67 bits (162), Expect = 3e-009
Identities = 30/50 (60%), Positives = 35/50 (70%)
Frame = +2
Query: 152 KKTKTTTKDPNKPKRPPSAFFVFLDDFRREFNEVNPNTKLVRLVELNGSQ 301
KK K KDPNKPKRPPSAFFVFLD+FR+E+ + NPN V V G +
Sbjct: 34 KKEKKAKKDPNKPKRPPSAFFVFLDEFRKEYKQANPNANSVSAVGKAGGE 83
>tr|B9HSP8|B9HSP8_POPTR High mobility group family OS=Populus trichocarpa
GN=HMGB910 PE=4 SV=1
Length = 176
Score = 66 bits (159), Expect = 7e-009
Identities = 30/55 (54%), Positives = 39/55 (70%)
Frame = +2
Query: 137 TRGRKKKTKTTTKDPNKPKRPPSAFFVFLDDFRREFNEVNPNTKLVRLVELNGSQ 301
++ R KK K T KDPNKPKRPPSAFFVFL++FR+ + + +PN K V V G +
Sbjct: 39 SKKRVKKEKITKKDPNKPKRPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGE 93
>tr|O04692|O04692_TOBAC DNA-binding protein OS=Nicotiana tabacum GN=T231 PE=2
SV=1
Length = 142
Score = 66 bits (159), Expect = 7e-009
Identities = 35/77 (45%), Positives = 44/77 (57%)
Frame = +2
Query: 83 MNCGETKFEATSTNQRLKTRGRKKKTKTTTKDPNKPKRPPSAFFVFLDDFRREFNEVNPN 262
M G++K A S K KK K KDPNKPKRPPSAFFVF+++FR+ + E +PN
Sbjct: 1 MKGGKSKAGADSKLGVRKKATETKKAKKAAKDPNKPKRPPSAFFVFMEEFRKTYKEKHPN 60
Query: 263 TKLVRLVELNGSQ*LRK 313
K V V G +K
Sbjct: 61 NKSVAAVGKAGGDAWKK 77
>tr|C6SVP1|C6SVP1_SOYBN Putative uncharacterized protein OS=Glycine max PE=2
SV=1
Length = 166
Score = 65 bits (158), Expect = 9e-009
Identities = 30/50 (60%), Positives = 35/50 (70%)
Frame = +2
Query: 152 KKTKTTTKDPNKPKRPPSAFFVFLDDFRREFNEVNPNTKLVRLVELNGSQ 301
KK K KDPNKPKRPPSAFFVFL++FR+ F NPN K V +V G +
Sbjct: 41 KKEKKAKKDPNKPKRPPSAFFVFLEEFRKTFKAENPNVKAVSVVGKAGGE 90
>tr|Q676W2|Q676W2_HYAOR HMG transcription factor (Fragment) OS=Hyacinthus
orientalis PE=2 SV=1
Length = 158
Score = 65 bits (158), Expect = 9e-009
Identities = 30/44 (68%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
Frame = +2
Query: 152 KKTKTTTKDPNKPKRPPSAFFVFLDDFRREFNEVNPNTKLVRLV 283
KK+K KDPNKPKRPPSAFFVF++DFR++F E NPN K V +V
Sbjct: 32 KKSK-AVKDPNKPKRPPSAFFVFMEDFRKQFKEKNPNNKQVSVV 74
>tr|Q1EMR5|Q1EMR5_PLAMJ HMG-protein (Fragment) OS=Plantago major GN=hmg1 PE=2
SV=1
Length = 212
Score = 65 bits (157), Expect = 1e-008
Identities = 34/59 (57%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Frame = +2
Query: 152 KKTKTTTKDPNKPKRPPSAFFVFLDDFRREFNEVNPNTKLVRLVELNGSQ*LRKRKHLT 328
KK K KDPNKPKRPPSAFFVFL++FR+ F + NPN K V V G + K K LT
Sbjct: 87 KKDKKAKKDPNKPKRPPSAFFVFLEEFRQTFKKENPNIKAVSAVGKAGGE---KWKSLT 142
Database: UniProt/TrEMBL
Posted date: Sat Aug 07 14:51:12 2010
Number of letters in database: 3,661,877,547
Number of sequences in database: 11,397,958
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,156,783,971,759
Number of Sequences: 11397958
Number of Extensions: 3156783971759
Number of Successful Extensions: 1086673401
Number of sequences better than 0.0: 0
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