BLASTX 7.6.2
Query= UN40982 /QuerySize=1114
(1113 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G22920.1 | Symbols: ATNYE1, NYE1 | NYE1 (NON-Y... 464 5e-131
TAIR9_protein||AT4G11911.1 | Symbols: | FUNCTIONS IN: molecular... 365 3e-101
TAIR9_protein||AT4G11910.1 | Symbols: | INVOLVED IN: biological... 363 1e-100
TAIR9_protein||AT1G44000.1 | Symbols: | unknown protein | chr1:... 173 2e-043
>TAIR9_protein||AT4G22920.1 | Symbols: ATNYE1, NYE1 | NYE1 (NON-YELLOWING 1) |
chr4:12016776-12017969 REVERSE
Length = 269
Score = 464 bits (1193), Expect = 5e-131
Identities = 219/269 (81%), Positives = 239/269 (88%)
Frame = +3
Query: 150 MCSLSANMLLPTKLKPAYSDKQSYCTTNSLLVSNTRPKRKKNQSTVPMARLFGPAIFESS 329
MCSLSA MLLPTKLKPAYSDK+S +++S L N R +KKNQS VP+ARLFGPAIFESS
Sbjct: 1 MCSLSAIMLLPTKLKPAYSDKRSNSSSSSSLFFNNRRSKKKNQSIVPVARLFGPAIFESS 60
Query: 330 KLKVLFLGVDDKKHPPTLPRTYTLTHSDITAKLTLAISHSINNSQLQGWANRIYIDEVVA 509
KLKVLFLGVD+KKHP TLPRTYTLTHSDITAKLTLAIS SINNSQLQGWANR+Y DEVVA
Sbjct: 61 KLKVLFLGVDEKKHPSTLPRTYTLTHSDITAKLTLAISQSINNSQLQGWANRLYRDEVVA 120
Query: 510 EWKKVKGNMSLHVHCHISGAHFLLDLFPKFRYYIFSKELPVVLNAIVHGDGNLLNSYPEL 689
EWKKVKG MSLHVHCHISG HFLLDLF KFRY+IF KELPVVL A VHGDGNLLN+YPEL
Sbjct: 121 EWKKVKGKMSLHVHCHISGGHFLLDLFAKFRYFIFCKELPVVLKAFVHGDGNLLNNYPEL 180
Query: 690 QEALVWVYFHSNVDEFNRVECWGPLWEATSHDGHRTQTLPETLCKEECGCCFPTVSSIPW 869
QEALVWVYFHSNV+EFN+VECWGPLWEA S DGH+T+TLPE C +EC CCFPTVSSIPW
Sbjct: 181 QEALVWVYFHSNVNEFNKVECWGPLWEAVSPDGHKTETLPEARCADECSCCFPTVSSIPW 240
Query: 870 SHSLTNEGVTDYPGTQAEGMSTPSPEKI* 956
SHSL+NEGV Y GTQ EG++TP+PEK+*
Sbjct: 241 SHSLSNEGVNGYSGTQTEGIATPNPEKL* 269
>TAIR9_protein||AT4G11911.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; BEST Arabidopsis thaliana protein match is: NYE1
(NON-YELLOWING 1) (TAIR:AT4G22920.1); Has 130 Blast hits to 128
proteins in 45 species: Archae - 0; Bacteria - 50; Metazoa - 0; Fungi -
0; Plants - 78; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
| chr4:7158150-7159440 FORWARD
Length = 274
Score = 365 bits (936), Expect = 3e-101
Identities = 175/246 (71%), Positives = 200/246 (81%), Gaps = 7/246 (2%)
Frame = +3
Query: 150 MCSLSANMLLPTKLKPAYSDKQSYCTTNSLLVSNTRPKRKKNQSTVPMARLFGPAIFESS 329
MCSL A++LLP LKP +SDK+ +S + S TR ++K QS P+ARLFG AIFE+S
Sbjct: 1 MCSLMASLLLPANLKPDFSDKE----RSSSIPSTTRSSKRKKQSMFPVARLFGQAIFEAS 56
Query: 330 KLKVLFLGVDDKKHPPTLPRTYTLTHSDITAKLTLAISHSINNSQLQGWANRIYIDEVVA 509
KL V FLGVD+KKHPP LPRTYT THSDITAKLTLAISHSINNSQLQGWANR+Y DEVVA
Sbjct: 57 KLNVKFLGVDEKKHPPNLPRTYTFTHSDITAKLTLAISHSINNSQLQGWANRLYRDEVVA 116
Query: 510 EWKKVKGNMSLHVHCHISGAHFLLDLFPKFRYYIFSKELPVVLNAIVHGDGNLLNSYPEL 689
EW+KVK NMSLHVHCHISG HFLLDL + RY+IF KELP+VL A VHGD N+LN+YPEL
Sbjct: 117 EWRKVKSNMSLHVHCHISGDHFLLDLIAELRYFIFCKELPMVLKAFVHGDENMLNNYPEL 176
Query: 690 QEALVWVYFHSNVDEFNRVECWGPLWEATSHDGHRTQT---LPETLCKEECGCCFPTVSS 860
EA VWVYFHSN+ +FN+VECWG L EATSHDG +T T LPE C ++C CCFPTVS+
Sbjct: 177 HEAFVWVYFHSNIPKFNKVECWGRLCEATSHDGCKTPTCEILPEPPCFDKCSCCFPTVST 236
Query: 861 IPWSHS 878
IPWSHS
Sbjct: 237 IPWSHS 242
>TAIR9_protein||AT4G11910.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein
match is: NYE1 (NON-YELLOWING 1) (TAIR:AT4G22920.1); Has 130 Blast hits
to 128 proteins in 45 species: Archae - 0; Bacteria - 50; Metazoa - 0;
Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink). | chr4:7156435-7157839 FORWARD
Length = 272
Score = 363 bits (931), Expect = 1e-100
Identities = 176/248 (70%), Positives = 204/248 (82%), Gaps = 10/248 (4%)
Frame = +3
Query: 150 MCSLSANMLLPTKLKPAYSDKQSYCTTNSLLVSNTRPKRKKNQSTVPMARLFGPAIFESS 329
MCSL+ N+LLP+K+KP + +K S T+SL V+ TR + KN+S VP+ARLFGPAIFE+S
Sbjct: 1 MCSLATNLLLPSKMKPVFPEKLS---TSSLCVT-TRRSKMKNRSIVPVARLFGPAIFEAS 56
Query: 330 KLKVLFLGVDDKKHPPTLPRTYTLTHSDITAKLTLAISHSINNSQLQGWANRIYIDEVVA 509
KLKVLFLGVD+KKHP LPRTYTLTHSDITAKLTLAIS SINNSQLQGWAN+++ DEVV
Sbjct: 57 KLKVLFLGVDEKKHPAKLPRTYTLTHSDITAKLTLAISQSINNSQLQGWANKLFRDEVVG 116
Query: 510 EWKKVKGNMSLHVHCHISGAHFLLDLFPKFRYYIFSKELPVVLNAIVHGDGNLLNSYPEL 689
EWKKVKG MSLHVHCHISG HF L+L K RYYIF KELPVVL A HGD LLN++PEL
Sbjct: 117 EWKKVKGKMSLHVHCHISGGHFFLNLIAKLRYYIFCKELPVVLEAFAHGDEYLLNNHPEL 176
Query: 690 QEALVWVYFHSNVDEFNRVECWGPLWEATS---HDGH---RTQTLPETLCKEECGCCFPT 851
QE+ VWVYFHSN+ E+N+VECWGPLWEA S HDG +++TLPE C +EC CCFPT
Sbjct: 177 QESPVWVYFHSNIPEYNKVECWGPLWEAMSQHQHDGRTHKKSETLPELPCPDECKCCFPT 236
Query: 852 VSSIPWSH 875
VS+IPWSH
Sbjct: 237 VSTIPWSH 244
>TAIR9_protein||AT1G44000.1 | Symbols: | unknown protein |
chr1:16708201-16709521 REVERSE
Length = 261
Score = 173 bits (437), Expect = 2e-043
Identities = 92/188 (48%), Positives = 122/188 (64%), Gaps = 13/188 (6%)
Frame = +3
Query: 297 RLFGP-AIFESSKLKVLFLG--VDDKKHPPTL-PRTYTLTHSDITAKLTLAISHSINNSQ 464
RL P A F+SSKLKV FLG +++K + + PRTY L+H D TA LTL IS+ IN Q
Sbjct: 65 RLLVPQANFDSSKLKVEFLGELLENKSNGGIITPRTYILSHCDFTANLTLTISNVINLDQ 124
Query: 465 LQGWANRIYIDEVVAEWKKVKGNMSLHVHCHISGAHFLLDLFPKFRYYIFSKELPVVLNA 644
L+GW + D+VVAEWKKV + LH+HC +SG L D+ + RY+IFSKELP+VL A
Sbjct: 125 LEGWYKK---DDVVAEWKKVNDELRLHIHCCVSGMSLLQDVAAELRYHIFSKELPLVLKA 181
Query: 645 IVHGDGNLLNSYPELQEALVWVYFHSNVDEFNRVECWGPLWEAT------SHDGHRTQTL 806
+VHGD + PEL +A VWVYFHS+ ++NR+ECWGPL +A +H G + T
Sbjct: 182 VVHGDSVMFRENPELMDAYVWVYFHSSTPKYNRIECWGPLKDAAKGKQQGNHQGFLSSTT 241
Query: 807 PETLCKEE 830
L + +
Sbjct: 242 SRKLIRHK 249
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,337,905,103
Number of Sequences: 33410
Number of Extensions: 20337905103
Number of Successful Extensions: 647909322
Number of sequences better than 0.0: 0
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