BLASTX 7.6.2
Query= UN41003 /QuerySize=1184
(1183 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G62800.1 | Symbols: DRB4 | DRB4 (DOUBLE-STRAND... 213 2e-055
TAIR9_protein||AT3G62800.2 | Symbols: DRB4 | DRB4 (DOUBLE-STRAND... 213 2e-055
TAIR9_protein||AT3G62800.3 | Symbols: | DRB4 (DOUBLE-STRANDED-R... 213 2e-055
TAIR9_protein||AT3G26932.1 | Symbols: DRB3 | DRB3 (dsRNA-binding... 122 5e-028
TAIR9_protein||AT3G26932.2 | Symbols: DRB3 | DRB3 (dsRNA-binding... 122 5e-028
TAIR9_protein||AT2G28380.1 | Symbols: DRB2 | DRB2 (DSRNA-BINDING... 120 3e-027
TAIR9_protein||AT5G41070.1 | Symbols: DRB5 | DRB5 (DSRNA-BINDING... 111 2e-024
>TAIR9_protein||AT3G62800.1 | Symbols: DRB4 | DRB4 (DOUBLE-STRANDED-RNA-BINDING
PROTEIN 4); double-stranded RNA binding / protein binding |
chr3:23225749-23227163 REVERSE
Length = 356
Score = 213 bits (541), Expect = 2e-055
Identities = 103/136 (75%), Positives = 120/136 (88%), Gaps = 1/136 (0%)
Frame = +3
Query: 54 MDHMYKSQLQSYAMKQNMELPVYAAERQGPAHAPRFRCKVTVFGQTFQSLELCPTLKAAE 233
MDH+YK QLQ+YA++ N+ELPVYA ER+GP HAPRFRC VT GQTFQS E PTLK+AE
Sbjct: 1 MDHVYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAE 60
Query: 234 HAAAKVALASLTPLNPEGVVDLAYKNLLQEIAQKENSLLPVYATSTSGPSHSPTFTSTVE 413
HAAAK+A+ASLTP +PEG +D+AYKNLLQEIAQKE+SLLP YAT+TSGPSH+PTFTSTVE
Sbjct: 61 HAAAKIAVASLTPQSPEG-IDVAYKNLLQEIAQKESSLLPFYATATSGPSHAPTFTSTVE 119
Query: 414 FAGNVYKGEEAKKKKI 461
FAG V+ GEEAK KK+
Sbjct: 120 FAGKVFSGEEAKTKKL 135
Score = 111 bits (277), Expect = 9e-025
Identities = 67/134 (50%), Positives = 85/134 (63%), Gaps = 9/134 (6%)
Frame = +1
Query: 439 KKQKKKKLAEMNAAKIAFMCIKYGQPNQTPSPSLPCEKQEAANSNVKSSEQVSPSLPSKM 618
++ K KKLAEM+AAK+AFM IK G NQT SP+LP E+QE NSNVKSS Q S PS
Sbjct: 128 EEAKTKKLAEMSAAKVAFMSIKNGNSNQTGSPTLPSERQEDVNSNVKSSPQEIHSQPSSK 187
Query: 619 V--TPDVPSKWIEVYEDELPDVLNAPANSVKDTNITASPVANLT-----VAPATNAMEMN 777
V TPD PSK I+V EDE PD+ +APA++ K+ N+ + N T A T+ M+MN
Sbjct: 188 VVMTPDTPSKGIKVNEDEFPDLHDAPASNAKEINVALNEPENPTNDGTLSALTTDGMKMN 247
Query: 778 ADAADL--SQKPTN 813
++ L PTN
Sbjct: 248 IASSSLPIPHNPTN 261
Score = 100 bits (248), Expect = 2e-021
Identities = 47/88 (53%), Positives = 65/88 (73%), Gaps = 9/88 (10%)
Frame = +1
Query: 748 APATNAMEMNADAAD--LSQKPTNNDD-------NESSEKKLVMGSGYRSIPGGQHVVCR 900
APA N ++ N A + Q PTN+ +ES +KKL+MG+G+ SIP GQHVVCR
Sbjct: 267 APAANGIKRNIAACSSWMPQNPTNDGSETSSCVVDESEKKKLIMGTGHLSIPTGQHVVCR 326
Query: 901 PWNPDMTLPEDSEMMFRDDRFISYRVLK 984
PWNP++TLP+D+EM+FRDD+FI+YR++K
Sbjct: 327 PWNPEITLPQDAEMLFRDDKFIAYRLVK 354
>TAIR9_protein||AT3G62800.2 | Symbols: DRB4 | DRB4 (DOUBLE-STRANDED-RNA-BINDING
PROTEIN 4); double-stranded RNA binding / protein binding |
chr3:23225749-23227163 REVERSE
Length = 356
Score = 213 bits (541), Expect = 2e-055
Identities = 103/136 (75%), Positives = 120/136 (88%), Gaps = 1/136 (0%)
Frame = +3
Query: 54 MDHMYKSQLQSYAMKQNMELPVYAAERQGPAHAPRFRCKVTVFGQTFQSLELCPTLKAAE 233
MDH+YK QLQ+YA++ N+ELPVYA ER+GP HAPRFRC VT GQTFQS E PTLK+AE
Sbjct: 1 MDHVYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAE 60
Query: 234 HAAAKVALASLTPLNPEGVVDLAYKNLLQEIAQKENSLLPVYATSTSGPSHSPTFTSTVE 413
HAAAK+A+ASLTP +PEG +D+AYKNLLQEIAQKE+SLLP YAT+TSGPSH+PTFTSTVE
Sbjct: 61 HAAAKIAVASLTPQSPEG-IDVAYKNLLQEIAQKESSLLPFYATATSGPSHAPTFTSTVE 119
Query: 414 FAGNVYKGEEAKKKKI 461
FAG V+ GEEAK KK+
Sbjct: 120 FAGKVFSGEEAKTKKL 135
Score = 111 bits (277), Expect = 9e-025
Identities = 67/134 (50%), Positives = 85/134 (63%), Gaps = 9/134 (6%)
Frame = +1
Query: 439 KKQKKKKLAEMNAAKIAFMCIKYGQPNQTPSPSLPCEKQEAANSNVKSSEQVSPSLPSKM 618
++ K KKLAEM+AAK+AFM IK G NQT SP+LP E+QE NSNVKSS Q S PS
Sbjct: 128 EEAKTKKLAEMSAAKVAFMSIKNGNSNQTGSPTLPSERQEDVNSNVKSSPQEIHSQPSSK 187
Query: 619 V--TPDVPSKWIEVYEDELPDVLNAPANSVKDTNITASPVANLT-----VAPATNAMEMN 777
V TPD PSK I+V EDE PD+ +APA++ K+ N+ + N T A T+ M+MN
Sbjct: 188 VVMTPDTPSKGIKVNEDEFPDLHDAPASNAKEINVALNEPENPTNDGTLSALTTDGMKMN 247
Query: 778 ADAADL--SQKPTN 813
++ L PTN
Sbjct: 248 IASSSLPIPHNPTN 261
Score = 100 bits (248), Expect = 2e-021
Identities = 47/88 (53%), Positives = 65/88 (73%), Gaps = 9/88 (10%)
Frame = +1
Query: 748 APATNAMEMNADAAD--LSQKPTNNDD-------NESSEKKLVMGSGYRSIPGGQHVVCR 900
APA N ++ N A + Q PTN+ +ES +KKL+MG+G+ SIP GQHVVCR
Sbjct: 267 APAANGIKRNIAACSSWMPQNPTNDGSETSSCVVDESEKKKLIMGTGHLSIPTGQHVVCR 326
Query: 901 PWNPDMTLPEDSEMMFRDDRFISYRVLK 984
PWNP++TLP+D+EM+FRDD+FI+YR++K
Sbjct: 327 PWNPEITLPQDAEMLFRDDKFIAYRLVK 354
>TAIR9_protein||AT3G62800.3 | Symbols: | DRB4 (DOUBLE-STRANDED-RNA-BINDING
PROTEIN 4); double-stranded RNA binding / protein binding |
chr3:23225749-23227163 REVERSE
Length = 330
Score = 213 bits (541), Expect = 2e-055
Identities = 103/136 (75%), Positives = 120/136 (88%), Gaps = 1/136 (0%)
Frame = +3
Query: 54 MDHMYKSQLQSYAMKQNMELPVYAAERQGPAHAPRFRCKVTVFGQTFQSLELCPTLKAAE 233
MDH+YK QLQ+YA++ N+ELPVYA ER+GP HAPRFRC VT GQTFQS E PTLK+AE
Sbjct: 1 MDHVYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSEFFPTLKSAE 60
Query: 234 HAAAKVALASLTPLNPEGVVDLAYKNLLQEIAQKENSLLPVYATSTSGPSHSPTFTSTVE 413
HAAAK+A+ASLTP +PEG +D+AYKNLLQEIAQKE+SLLP YAT+TSGPSH+PTFTSTVE
Sbjct: 61 HAAAKIAVASLTPQSPEG-IDVAYKNLLQEIAQKESSLLPFYATATSGPSHAPTFTSTVE 119
Query: 414 FAGNVYKGEEAKKKKI 461
FAG V+ GEEAK KK+
Sbjct: 120 FAGKVFSGEEAKTKKL 135
Score = 107 bits (266), Expect = 2e-023
Identities = 60/116 (51%), Positives = 77/116 (66%), Gaps = 2/116 (1%)
Frame = +1
Query: 439 KKQKKKKLAEMNAAKIAFMCIKYGQPNQTPSPSLPCEKQEAANSNVKSSEQVSPSLPSKM 618
++ K KKLAEM+AAK+AFM IK G NQT SP+LP E+QE NSNVKSS Q S PS
Sbjct: 128 EEAKTKKLAEMSAAKVAFMSIKNGNSNQTGSPTLPSERQEDVNSNVKSSPQEIHSQPSSK 187
Query: 619 V--TPDVPSKWIEVYEDELPDVLNAPANSVKDTNITASPVANLTVAPATNAMEMNA 780
V TPD PSK I+V EDE PD+ +APA++ K+ N+ + N T +A+ +A
Sbjct: 188 VVMTPDTPSKGIKVNEDEFPDLHDAPASNAKEINVALNEPENPTNDGTLSALTTDA 243
Score = 101 bits (251), Expect = 9e-022
Identities = 52/116 (44%), Positives = 73/116 (62%), Gaps = 15/116 (12%)
Frame = +1
Query: 664 ELPDVLNAPANSVKDTNITASPVANLTVAPATNAMEMNADAAD--LSQKPTNNDD----- 822
E+ LN P N D ++A A N ++ N A + Q PTN+
Sbjct: 219 EINVALNEPENPTNDGTLSA------LTTDAANGIKRNIAACSSWMPQNPTNDGSETSSC 272
Query: 823 --NESSEKKLVMGSGYRSIPGGQHVVCRPWNPDMTLPEDSEMMFRDDRFISYRVLK 984
+ES +KKL+MG+G+ SIP GQHVVCRPWNP++TLP+D+EM+FRDD+FI+YR++K
Sbjct: 273 VVDESEKKKLIMGTGHLSIPTGQHVVCRPWNPEITLPQDAEMLFRDDKFIAYRLVK 328
>TAIR9_protein||AT3G26932.1 | Symbols: DRB3 | DRB3 (dsRNA-binding protein 3);
RNA binding / double-stranded RNA binding | chr3:9930460-9931714
REVERSE
Length = 360
Score = 122 bits (305), Expect = 5e-028
Identities = 67/139 (48%), Positives = 84/139 (60%), Gaps = 7/139 (5%)
Frame = +3
Query: 63 MYKSQLQSYAMKQNMELPVYAAERQGPAHAPRFRCKVTVFGQTFQSLELCPTLKAAEHAA 242
MYK+QLQ A + LP Y R+GP HAPRF+ V G+ F+S C TL+ AEH+A
Sbjct: 1 MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60
Query: 243 AKVALASLTPLNPE-----GVVDLA--YKNLLQEIAQKENSLLPVYATSTSGPSHSPTFT 401
A+VAL++L+ P V+D YKNLLQE A + LPVY + SGP H PTF+
Sbjct: 61 AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120
Query: 402 STVEFAGNVYKGEEAKKKK 458
TVE AG + GE AK KK
Sbjct: 121 CTVELAGMSFNGESAKTKK 139
Score = 52 bits (122), Expect = 9e-007
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +3
Query: 63 MYKSQLQSYAMKQNMELPVYAAERQGPAHAPRFRCKVTVFGQTFQSLELCPTLKAAEHAA 242
+YK+ LQ A + ++LPVY + R GP H P F C V + G +F E T K AE A
Sbjct: 87 IYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFSCTVELAGMSFNG-ESAKTKKQAEKNA 145
Query: 243 AKVALASL 266
A A SL
Sbjct: 146 AIAAWFSL 153
>TAIR9_protein||AT3G26932.2 | Symbols: DRB3 | DRB3 (dsRNA-binding protein 3);
RNA binding / double-stranded RNA binding | chr3:9930460-9931714
REVERSE
Length = 360
Score = 122 bits (305), Expect = 5e-028
Identities = 67/139 (48%), Positives = 84/139 (60%), Gaps = 7/139 (5%)
Frame = +3
Query: 63 MYKSQLQSYAMKQNMELPVYAAERQGPAHAPRFRCKVTVFGQTFQSLELCPTLKAAEHAA 242
MYK+QLQ A + LP Y R+GP HAPRF+ V G+ F+S C TL+ AEH+A
Sbjct: 1 MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHSA 60
Query: 243 AKVALASLTPLNPE-----GVVDLA--YKNLLQEIAQKENSLLPVYATSTSGPSHSPTFT 401
A+VAL++L+ P V+D YKNLLQE A + LPVY + SGP H PTF+
Sbjct: 61 AEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFS 120
Query: 402 STVEFAGNVYKGEEAKKKK 458
TVE AG + GE AK KK
Sbjct: 121 CTVELAGMSFNGESAKTKK 139
Score = 52 bits (122), Expect = 9e-007
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = +3
Query: 63 MYKSQLQSYAMKQNMELPVYAAERQGPAHAPRFRCKVTVFGQTFQSLELCPTLKAAEHAA 242
+YK+ LQ A + ++LPVY + R GP H P F C V + G +F E T K AE A
Sbjct: 87 IYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTFSCTVELAGMSFNG-ESAKTKKQAEKNA 145
Query: 243 AKVALASL 266
A A SL
Sbjct: 146 AIAAWFSL 153
>TAIR9_protein||AT2G28380.1 | Symbols: DRB2 | DRB2 (DSRNA-BINDING PROTEIN 2);
double-stranded RNA binding | chr2:12134098-12135915 REVERSE
Length = 435
Score = 120 bits (299), Expect = 3e-027
Identities = 65/139 (46%), Positives = 82/139 (58%), Gaps = 7/139 (5%)
Frame = +3
Query: 63 MYKSQLQSYAMKQNMELPVYAAERQGPAHAPRFRCKVTVFGQTFQSLELCPTLKAAEHAA 242
MYK+QLQ A + LP Y R+GP HAPRF+ V G+ F+S + C TL+ AEH+A
Sbjct: 1 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPQYCSTLRQAEHSA 60
Query: 243 AKVALASLTPLNPEGVVDL-------AYKNLLQEIAQKENSLLPVYATSTSGPSHSPTFT 401
A+VAL +L+ P + YKNLLQEIAQ+ + LP Y T SG H P FT
Sbjct: 61 AEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVFT 120
Query: 402 STVEFAGNVYKGEEAKKKK 458
TVE AG + G+ AK KK
Sbjct: 121 GTVELAGITFTGDPAKNKK 139
>TAIR9_protein||AT5G41070.1 | Symbols: DRB5 | DRB5 (DSRNA-BINDING PROTEIN 5);
double-stranded RNA binding | chr5:16438547-16439916 FORWARD
Length = 394
Score = 111 bits (275), Expect = 2e-024
Identities = 62/139 (44%), Positives = 78/139 (56%), Gaps = 7/139 (5%)
Frame = +3
Query: 63 MYKSQLQSYAMKQNMELPVYAAERQGPAHAPRFRCKVTVFGQTFQSLELCPTLKAAEHAA 242
MYK+QLQ A + LP Y R+GP HAPRF+ V G+ F+S C TL+ AEHAA
Sbjct: 1 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFESPTYCSTLRQAEHAA 60
Query: 243 AKVALASLTPLNPEGVVDL-------AYKNLLQEIAQKENSLLPVYATSTSGPSHSPTFT 401
A+V+L L+ P + YKNLLQE A + LP+Y + SG H P F+
Sbjct: 61 AEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGFS 120
Query: 402 STVEFAGNVYKGEEAKKKK 458
TVE AG + GE AK KK
Sbjct: 121 CTVELAGMTFTGESAKTKK 139
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,337,905,103
Number of Sequences: 33410
Number of Extensions: 20337905103
Number of Successful Extensions: 647909322
Number of sequences better than 0.0: 0
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