BLASTX 7.6.2
Query= UN41130 /QuerySize=1301
(1300 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G58180.1 | Symbols: | PBS lyase HEAT-like rep... 533 1e-151
TAIR9_protein||AT3G62530.1 | Symbols: | PBS lyase HEAT-like rep... 158 1e-038
TAIR9_protein||AT3G43260.1 | Symbols: | FUNCTIONS IN: molecular... 59 5e-009
>TAIR9_protein||AT3G58180.1 | Symbols: | PBS lyase HEAT-like repeat-containing
protein | chr3:21544189-21545981 FORWARD
Length = 315
Score = 533 bits (1372), Expect = 1e-151
Identities = 277/313 (88%), Positives = 295/313 (94%), Gaps = 4/313 (1%)
Frame = -3
Query: 1187 DGGVS---KLEKFLCERLLDQSQPISERFRALFSLRNLKGPAPRNALILASRDSSNLLAH 1017
+G VS LEKFLCERL+DQSQPISERFRALFSLRNLKGP PRNALILASRDSSNLLAH
Sbjct: 4 NGSVSSMVNLEKFLCERLVDQSQPISERFRALFSLRNLKGPGPRNALILASRDSSNLLAH 63
Query: 1016 EAAFALGQMQDAEAVPALESVLNDMSLHPIVRHEAAEALGAIGLAGNAEILKKSLILDPA 837
EAAFALGQMQDAEA+PALESVLNDMSLHPIVRHEAAEALGAIGLAGN ILKKSL DPA
Sbjct: 64 EAAFALGQMQDAEAIPALESVLNDMSLHPIVRHEAAEALGAIGLAGNVNILKKSLSSDPA 123
Query: 836 QEVRETCELALKRIEELSSVDAEKN*SDSTERSPFMSVDPAAPAAAFSSVHQLREILMDE 657
QEVRETCELALKRIE++S+VDAE N S +TE+SPFMSVDPA PAA+FSSVHQLR++L+DE
Sbjct: 124 QEVRETCELALKRIEDMSNVDAE-NQSSTTEKSPFMSVDPAGPAASFSSVHQLRQVLLDE 182
Query: 656 TKGMYERYAALFALRNHGGEEAVSAIVDSLSADSALLRHEVAYVLGQLQNKAALDTLSKI 477
TKGMYERYAALFALRNHGGEEAVSAIVDSLSA SALLRHEVAYVLGQLQ+K AL TLSK+
Sbjct: 183 TKGMYERYAALFALRNHGGEEAVSAIVDSLSASSALLRHEVAYVLGQLQSKTALATLSKV 242
Query: 476 LRDLNEHPMVRHEAAEALGSIADEQSIALLQEFSRDPEPIVSQSCEVALSMLEFENSGKS 297
LRD+NEHPMVRHEAAEALGSIADEQSIALL+EFS+DPEPIV+QSCEVALSMLEFENSGKS
Sbjct: 243 LRDVNEHPMVRHEAAEALGSIADEQSIALLEEFSKDPEPIVAQSCEVALSMLEFENSGKS 302
Query: 296 FEFFFTQDPLVH* 258
FEFFFTQDPLVH*
Sbjct: 303 FEFFFTQDPLVH* 315
Score = 94 bits (232), Expect = 2e-019
Identities = 51/122 (41%), Positives = 80/122 (65%), Gaps = 1/122 (0%)
Frame = -3
Query: 680 LREILMDETKGMYERYAALFALRNHGGEEAVSAIVDSLSADSALLRHEVAYVLGQLQNKA 501
L E L+D+++ + ER+ ALF+LRN G +A++ + S LL HE A+ LGQ+Q+
Sbjct: 17 LCERLVDQSQPISERFRALFSLRNLKGPGPRNALILASRDSSNLLAHEAAFALGQMQDAE 76
Query: 500 ALDTLSKILRDLNEHPMVRHEAAEALGSIADEQSIALLQE-FSRDPEPIVSQSCEVALSM 324
A+ L +L D++ HP+VRHEAAEALG+I ++ +L++ S DP V ++CE+AL
Sbjct: 77 AIPALESVLNDMSLHPIVRHEAAEALGAIGLAGNVNILKKSLSSDPAQEVRETCELALKR 136
Query: 323 LE 318
+E
Sbjct: 137 IE 138
Score = 91 bits (225), Expect = 1e-018
Identities = 51/118 (43%), Positives = 76/118 (64%), Gaps = 1/118 (0%)
Frame = -3
Query: 1145 LLDQSQPISERFRALFSLRNLKGPAPRNALILASRDSSNLLAHEAAFALGQMQDAEAVPA 966
LLD+++ + ER+ ALF+LRN G +A++ + SS LL HE A+ LGQ+Q A+
Sbjct: 179 LLDETKGMYERYAALFALRNHGGEEAVSAIVDSLSASSALLRHEVAYVLGQLQSKTALAT 238
Query: 965 LESVLNDMSLHPIVRHEAAEALGAIGLAGNAEILKKSLILDPAQEVRETCELALKRIE 792
L VL D++ HP+VRHEAAEALG+I + +L++ DP V ++CE+AL +E
Sbjct: 239 LSKVLRDVNEHPMVRHEAAEALGSIADEQSIALLEE-FSKDPEPIVAQSCEVALSMLE 295
>TAIR9_protein||AT3G62530.1 | Symbols: | PBS lyase HEAT-like repeat-containing
protein | chr3:23132219-23133121 FORWARD
Length = 222
Score = 158 bits (398), Expect = 1e-038
Identities = 78/136 (57%), Positives = 109/136 (80%)
Frame = -3
Query: 707 AAAFSSVHQLREILMDETKGMYERYAALFALRNHGGEEAVSAIVDSLSADSALLRHEVAY 528
AA SS+H +RE L++ET+ Y R ALFALRNHGGE+A++ I++SL +S+++R E A+
Sbjct: 81 AANISSIHSMRESLLEETEEDYYRRLALFALRNHGGEDAINVIIESLGVESSMIRIEAAF 140
Query: 527 VLGQLQNKAALDTLSKILRDLNEHPMVRHEAAEALGSIADEQSIALLQEFSRDPEPIVSQ 348
VLGQL++K A+ +LSKILRD+ EHPMVR EAA+ALG IADE+S +LQE S D +PI+++
Sbjct: 141 VLGQLESKTAIASLSKILRDVKEHPMVRVEAAKALGFIADEKSREVLQELSGDLDPIIAK 200
Query: 347 SCEVALSMLEFENSGK 300
C+ +LS+LEF+NS K
Sbjct: 201 GCDSSLSILEFKNSKK 216
Score = 69 bits (167), Expect = 6e-012
Identities = 45/121 (37%), Positives = 72/121 (59%), Gaps = 3/121 (2%)
Frame = -3
Query: 1151 ERLLDQSQPISERFRALFSLRNLKGPAPRNALILASRDSSNLLAHEAAFALGQMQDAEAV 972
E LL++++ R ALF+LRN G N +I + S+++ EAAF LGQ++ A+
Sbjct: 92 ESLLEETEEDYYRRLALFALRNHGGEDAINVIIESLGVESSMIRIEAAFVLGQLESKTAI 151
Query: 971 PALESVLNDMSLHPIVRHEAAEALGAIGLAGNAEILKK-SLILDPAQEVRETCELALKRI 795
+L +L D+ HP+VR EAA+ALG I + E+L++ S LDP + + C+ +L +
Sbjct: 152 ASLSKILRDVKEHPMVRVEAAKALGFIADEKSREVLQELSGDLDPI--IAKGCDSSLSIL 209
Query: 794 E 792
E
Sbjct: 210 E 210
>TAIR9_protein||AT3G43260.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein match is:
PBS lyase HEAT-like repeat-containing protein (TAIR:AT3G62530.1); Has
43 Blast hits to 39 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 8; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 3
(source: NCBI BLink). | chr3:15219454-15221723 FORWARD
Length = 270
Score = 59 bits (142), Expect = 5e-009
Identities = 28/60 (46%), Positives = 43/60 (71%)
Frame = -3
Query: 704 AAFSSVHQLREILMDETKGMYERYAALFALRNHGGEEAVSAIVDSLSADSALLRHEVAYV 525
AA +H RE L++ET+ +Y+R ALFAL + GGE+AV+ IV+SL +S+++ E A+V
Sbjct: 199 AATCFIHNTRESLLEETEEIYQRCLALFALMHQGGEDAVNVIVESLGVESSMIHIEAAFV 258
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,381,992,749
Number of Sequences: 33410
Number of Extensions: 20381992749
Number of Successful Extensions: 647962682
Number of sequences better than 0.0: 0
|
