Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN41156


BLASTX 7.6.2

Query= UN41156 /QuerySize=875
        (874 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G25540.1 | Symbols: CID6 | CID6 (CTC-Interacti...    178   5e-045
TAIR9_protein||AT5G11440.1 | Symbols: CID5, IPD1 | CID5; protein...    116   2e-026

>TAIR9_protein||AT5G25540.1 | Symbols: CID6 | CID6 (CTC-Interacting Domain 6);
        protein binding | chr5:8891770-8892362 REVERSE

          Length = 176

 Score =  178 bits (450), Expect = 5e-045
 Identities = 101/171 (59%), Positives = 115/171 (67%), Gaps = 8/171 (4%)
 Frame = +3

Query:  75 MKPGGSALNPHAAAYIPLSKREAGSSAKPAAAAAAAAADSTHHVQ--YQPYGAYGYDCVQ 248
           MK G S LNP+AAAY+PLSKRE   S               HH Q  Y  YG  G    Q
Sbjct:   1 MKSGSSTLNPYAAAYVPLSKRE--GSLVDTKPVTQQHMQQQHHQQQPYYGYGVQGMGSYQ 58

Query: 249 GSQMYMPKTTYSSSDNKQMRDEDLEMDMEIEYLLATFSALSHESINDVYLANSGDLDATI 428
           G+QM   K+      N Q++DEDLEMDM+IEYLLAT+  LS ESINDVYLAN+ DLDATI
Sbjct:  59 GTQMSPKKSPSEMVYNHQLKDEDLEMDMDIEYLLATYPGLSQESINDVYLANTCDLDATI 118

Query: 429 EMLNQLEIYSTEAQEYLPDTLDIGDVPETIMPSTSSAPEQKNASNEASASS 581
           EMLNQLEIYSTEA+EYLPDTLDIGDVPE I  S+    +QKN  + AS+SS
Sbjct: 119 EMLNQLEIYSTEAEEYLPDTLDIGDVPEIITESS----KQKNDGSSASSSS 165

>TAIR9_protein||AT5G11440.1 | Symbols: CID5, IPD1 | CID5; protein binding |
        chr5:3653060-3653607 REVERSE

          Length = 156

 Score =  116 bits (290), Expect = 2e-026
 Identities = 64/101 (63%), Positives = 79/101 (78%), Gaps = 6/101 (5%)
 Frame = +3

Query: 255 QMYMPKTTYSSSDNKQMRDEDLEM----DMEIEYLLATFSALSHESINDVYLANSGDLDA 422
           ++ MPK + S    KQ+RD+DL++    DM+IEYLL TFS LS ESI DVYLAN GDL+A
Sbjct:  41 EVSMPKKS-SEMAYKQIRDDDLDLEMDIDMDIEYLLVTFSGLSQESITDVYLANGGDLEA 99

Query: 423 TIEMLNQLEIYSTEAQEYLPDTLDIGDVPETIMPSTSSAPE 545
           TIEMLNQLEIYSTE++E LP+TLDIGD+ E+  PSTS + E
Sbjct: 100 TIEMLNQLEIYSTESEENLPETLDIGDISES-GPSTSKSTE 139

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,381,992,749
Number of Sequences: 33410
Number of Extensions: 20381992749
Number of Successful Extensions: 647962682
Number of sequences better than 0.0: 0