BLASTX 7.6.2
Query= UN41177 /QuerySize=833
(832 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297852586|ref|XP_002894174.1| predicted protein [Arabidopsis ... 127 2e-027
gi|8778700|gb|AAF79708.1|AC020889_16 T1N15.25 [Arabidopsis thali... 118 1e-024
gi|15221913|ref|NP_175295.1| high mobility group A5 [Arabidopsis... 118 1e-024
gi|297852480|ref|XP_002894121.1| hypothetical protein ARALYDRAFT... 117 2e-024
gi|42564980|ref|NP_188431.3| DNA-binding protein HMR1-like prote... 74 3e-011
gi|297834712|ref|XP_002885238.1| hypothetical protein ARALYDRAFT... 72 7e-011
>gi|297852586|ref|XP_002894174.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 127 bits (319), Expect = 2e-027
Identities = 68/113 (60%), Positives = 81/113 (71%), Gaps = 6/113 (5%)
Frame = +1
Query: 148 RRLTTTTSSSGQQDISYGELKKKFELFQEKAKEIVNVLKAEVGGSYNQAVVQAIHDLEEL 327
R+ + +SGQQD YGELKKK ELFQ +AK+IV VLKAE+GG+ NQAVVQAI DLE
Sbjct: 225 RKNAVSMRASGQQDGDYGELKKKLELFQARAKDIVTVLKAEIGGTENQAVVQAIQDLEGT 284
Query: 328 TVTKREATEEPRHVQ----PDEHHFENEPQP--EGHGYGQVQTETEAMQEALF 468
T T E T +P+H++ PDE H E EP+P +G G GQ QTE EAMQEALF
Sbjct: 285 TGTTTETTNKPQHMEEVQLPDEEHPETEPEPVGQGQGQGQTQTEAEAMQEALF 337
>gi|8778700|gb|AAF79708.1|AC020889_16 T1N15.25 [Arabidopsis thaliana]
Length = 594
Score = 118 bits (294), Expect = 1e-024
Identities = 65/111 (58%), Positives = 78/111 (70%), Gaps = 12/111 (10%)
Frame = +1
Query: 148 RRLTTTTSSSGQQDISYGELKKKFELFQEKAKEIVNVLKAEVGGSYNQAVVQAIHDLEEL 327
R+ + +SG+QD YGELKKKFELFQ +AK+IV VLK+E+GGS NQAVVQAI DLE +
Sbjct: 492 RKNAVSVGASGRQDGDYGELKKKFELFQARAKDIVIVLKSEIGGSGNQAVVQAIQDLEGI 551
Query: 328 TVTKREATEEPRHVQ----PDEHHFENEPQPEGHGYGQVQTETEAMQEALF 468
E T EP+H++ PDE H E EP+ EG G QTE EAMQEALF
Sbjct: 552 A----ETTNEPKHMEEVQLPDEEHLETEPEAEGQG----QTEAEAMQEALF 594
>gi|15221913|ref|NP_175295.1| high mobility group A5 [Arabidopsis thaliana]
Length = 479
Score = 118 bits (294), Expect = 1e-024
Identities = 65/111 (58%), Positives = 78/111 (70%), Gaps = 12/111 (10%)
Frame = +1
Query: 148 RRLTTTTSSSGQQDISYGELKKKFELFQEKAKEIVNVLKAEVGGSYNQAVVQAIHDLEEL 327
R+ + +SG+QD YGELKKKFELFQ +AK+IV VLK+E+GGS NQAVVQAI DLE +
Sbjct: 377 RKNAVSVGASGRQDGDYGELKKKFELFQARAKDIVIVLKSEIGGSGNQAVVQAIQDLEGI 436
Query: 328 TVTKREATEEPRHVQ----PDEHHFENEPQPEGHGYGQVQTETEAMQEALF 468
E T EP+H++ PDE H E EP+ EG G QTE EAMQEALF
Sbjct: 437 A----ETTNEPKHMEEVQLPDEEHLETEPEAEGQG----QTEAEAMQEALF 479
>gi|297852480|ref|XP_002894121.1| hypothetical protein ARALYDRAFT_474000
[Arabidopsis lyrata subsp. lyrata]
Length = 473
Score = 117 bits (292), Expect = 2e-024
Identities = 69/126 (54%), Positives = 82/126 (65%), Gaps = 8/126 (6%)
Frame = +1
Query: 88 LTPLPNTPYMAAPLTPPPSRRRLTTTTSSSGQQDISYGELKKKFELFQEKAKEIVNVLKA 267
+ P+ + PL P R+ + +SG+QD YGELKKKFELFQ +AK+IV VLK+
Sbjct: 353 MKPMRSFARTGRPLGRP---RKNAVSVGASGRQDGDYGELKKKFELFQARAKDIVIVLKS 409
Query: 268 EVGGSYNQAVVQAIHDLEELTVTKREATEEPRHVQ-PDEHHFENEPQPEGHGYGQVQTET 444
E+GGS NQAVVQAI DLE LT T E + +Q PDE H E EPQPEG G QTE
Sbjct: 410 EIGGSGNQAVVQAIQDLEGLTETTNEPQQHMPELQLPDEEHPETEPQPEGQG----QTEA 465
Query: 445 EAMQEA 462
EAMQEA
Sbjct: 466 EAMQEA 471
>gi|42564980|ref|NP_188431.3| DNA-binding protein HMR1-like protein [Arabidopsis
thaliana]
Length = 480
Score = 74 bits (179), Expect = 3e-011
Identities = 46/82 (56%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Frame = +1
Query: 136 PPSRRRLTTTTSSSGQQDISYGELKKKFELFQEKAKEIVNVLKAEVGGSYNQAVVQAIHD 315
P R R T+ ++G QD GELKKKF++FQEK KEIV VLK V S NQAVVQAI D
Sbjct: 358 PVGRPRKIGTSVTTGTQD--SGELKKKFDIFQEKVKEIVKVLKDGV-TSENQAVVQAIKD 414
Query: 316 LEELTVTKREATEEPRHVQPDE 381
LE LTVT+ + VQP+E
Sbjct: 415 LEALTVTETVEPQVMEEVQPEE 436
>gi|297834712|ref|XP_002885238.1| hypothetical protein ARALYDRAFT_479291
[Arabidopsis lyrata subsp. lyrata]
Length = 480
Score = 72 bits (176), Expect = 7e-011
Identities = 45/82 (54%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Frame = +1
Query: 136 PPSRRRLTTTTSSSGQQDISYGELKKKFELFQEKAKEIVNVLKAEVGGSYNQAVVQAIHD 315
P R R T+ ++G QD GELKKKF++FQEK KEIV VLK V S NQAVVQAI D
Sbjct: 360 PVGRPRKFATSVTTGAQD--SGELKKKFDIFQEKVKEIVKVLKDGV-TSENQAVVQAIKD 416
Query: 316 LEELTVTKREATEEPRHVQPDE 381
LE LTVT+ + V P+E
Sbjct: 417 LEALTVTETVVEPQVEEVPPEE 438
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,587,916,767,856
Number of Sequences: 15229318
Number of Extensions: 4587916767856
Number of Successful Extensions: 1071853064
Number of sequences better than 0.0: 0
|