BLASTX 7.6.2
Query= UN41177 /QuerySize=833
(832 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G48620.1 | Symbols: HON5 | HON5 (High Mobility... 118 5e-027
TAIR9_protein||AT3G18035.1 | Symbols: HON4 | HON4; DNA binding |... 74 1e-013
>TAIR9_protein||AT1G48620.1 | Symbols: HON5 | HON5 (High Mobility Group Family A
5); DNA binding | chr1:17974148-17976301 REVERSE
Length = 480
Score = 118 bits (295), Expect = 5e-027
Identities = 65/112 (58%), Positives = 78/112 (69%), Gaps = 12/112 (10%)
Frame = +1
Query: 148 RRLTTTTSSSGQQDISYGELKKKFELFQEKAKEIVNVLKAEVGGSYNQAVVQAIHDLEEL 327
R+ + +SG+QD YGELKKKFELFQ +AK+IV VLK+E+GGS NQAVVQAI DLE +
Sbjct: 377 RKNAVSVGASGRQDGDYGELKKKFELFQARAKDIVIVLKSEIGGSGNQAVVQAIQDLEGI 436
Query: 328 TVTKREATEEPRHVQ----PDEHHFENEPQPEGHGYGQVQTETEAMQEALF* 471
E T EP+H++ PDE H E EP+ EG G QTE EAMQEALF*
Sbjct: 437 A----ETTNEPKHMEEVQLPDEEHLETEPEAEGQG----QTEAEAMQEALF* 480
Score = 55 bits (131), Expect = 5e-008
Identities = 26/50 (52%), Positives = 31/50 (62%), Gaps = 6/50 (12%)
Frame = +3
Query: 18 LSKSMDP--SLPPQFTAFPPFNNSNPYAPPQHPLYGGAVNSPAVAPPPNN 161
LS + DP PPQFT+FPPF N+NP+A P HP + G P PPNN
Sbjct: 5 LSATNDPHHPPPPQFTSFPPFTNTNPFASPNHPFFTG----PTAVAPPNN 50
>TAIR9_protein||AT3G18035.1 | Symbols: HON4 | HON4; DNA binding |
chr3:6169384-6171558 REVERSE
Length = 481
Score = 74 bits (179), Expect = 1e-013
Identities = 46/82 (56%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Frame = +1
Query: 136 PPSRRRLTTTTSSSGQQDISYGELKKKFELFQEKAKEIVNVLKAEVGGSYNQAVVQAIHD 315
P R R T+ ++G QD GELKKKF++FQEK KEIV VLK V S NQAVVQAI D
Sbjct: 358 PVGRPRKIGTSVTTGTQD--SGELKKKFDIFQEKVKEIVKVLKDGV-TSENQAVVQAIKD 414
Query: 316 LEELTVTKREATEEPRHVQPDE 381
LE LTVT+ + VQP+E
Sbjct: 415 LEALTVTETVEPQVMEEVQPEE 436
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,381,992,749
Number of Sequences: 33410
Number of Extensions: 20381992749
Number of Successful Extensions: 647962682
Number of sequences better than 0.0: 0
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