BLASTX 7.6.2

Query= UN41233 /QuerySize=1368
        (1367 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G18990.1 | Symbols: VRN1, REM39 | VRN1 (REDUCE...    341   7e-094
TAIR9_protein||AT1G49480.1 | Symbols: RTV1 | RTV1 (related to ve...    315   4e-086
TAIR9_protein||AT5G18000.1 | Symbols:  | transcriptional factor ...     49   9e-006

>TAIR9_protein||AT3G18990.1 | Symbols: VRN1, REM39 | VRN1 (REDUCED VERNALIZATION
        RESPONSE 1); transcription repressor | chr3:6549077-6551568 REVERSE

          Length = 342

 Score =  341 bits (874), Expect = 7e-094
 Identities = 173/198 (87%), Positives = 181/198 (91%), Gaps = 6/198 (3%)
 Frame = -1

Query: 830 ETTVHANKQHASSAIQSFFAGPVKAEEATPTPTLKVTKKRGR-KKNADPVNPEEVNSSAP 654
           E+TV ANK +ASSAIQ+ F GPVKAEE TPTP  K+ KKRGR KKNAD   PEE+NSSAP
Sbjct: 146 ESTVPANKGYASSAIQTLFTGPVKAEEPTPTP--KIPKKRGRKKKNAD---PEEINSSAP 200

Query: 653 RVDDPESRSKFYESASARKRTATTEERERAINTSKTFEPTNPFFRVVLRPSYLYRGCIMY 474
           R DDPE+RSKFYESASARKRT T EERERAIN +KTFEPTNPFFRVVLRPSYLYRGCIMY
Sbjct: 201 RDDDPENRSKFYESASARKRTVTAEERERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMY 260

Query: 473 LPSGFAEKYLSGISGFIKVQLGEKQWPVRCLYKAGRAKFSQGWYEFTVENNLGEGDVCVF 294
           LPSGFAEKYLSGISGFIKVQL EKQWPVRCLYKAGRAKFSQGWYEFT+ENNLGEGDVCVF
Sbjct: 261 LPSGFAEKYLSGISGFIKVQLAEKQWPVRCLYKAGRAKFSQGWYEFTLENNLGEGDVCVF 320

Query: 293 ELLRTRDFVLKVTAFRVN 240
           ELLRTRDFVLKVTAFRVN
Sbjct: 321 ELLRTRDFVLKVTAFRVN 338


 Score =  249 bits (634), Expect = 4e-066
 Identities = 125/134 (93%), Positives = 126/134 (94%), Gaps = 2/134 (1%)
 Frame = -1

Query: 1229 MPRPFFHKLIFPSTIQEKRLRVPDKFASKFKDELSVAVALTVPDGHVWRVGLRKADNNKI 1050
            MPRPFFHKLIF STIQEKRLRVPDKF SKFKDELSVAVALTVPDGHVWRVGLRKAD NKI
Sbjct:    1 MPRPFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKAD-NKI 59

Query: 1049 WFQDGW*EFVDRYSIRIGYLLIFRYEGNSAFSVSIYNLSHSEINYHSTGLMDSAAHNHFK 870
            WFQDGW EFVDRYSIRIGYLLIFRYEGNSAFSV I+NLSHSEINYHSTGLMDS AHNHFK
Sbjct:   60 WFQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDS-AHNHFK 118

Query:  869 RPCLFEDLEDEDAE 828
            R  LFEDLEDEDAE
Sbjct:  119 RARLFEDLEDEDAE 132

>TAIR9_protein||AT1G49480.1 | Symbols: RTV1 | RTV1 (related to vernalization1
        1); DNA binding / transcription factor | chr1:18314596-18315460
        REVERSE

          Length = 227

 Score =  315 bits (807), Expect = 4e-086
 Identities = 170/229 (74%), Positives = 184/229 (80%), Gaps = 17/229 (7%)
 Frame = -1

Query: 899 MDSAAHNHFKRPCLFEDLEDEDA--------ETTVHANKQH-ASSAIQSFFAGPVKAEEA 747
           MDSA +   KR  LFED E +DA        E+T   NK +  S+AIQSFF    K  +A
Sbjct:   3 MDSAQNQFNKRARLFEDPELKDAKVIYPSNPESTEPVNKGYGGSTAIQSFF----KESKA 58

Query: 746 TPTPTLKVTKKRGRKKNADPVNPEEVNSSAPRVDDPESRSKFYESASARKRTATTEERER 567
             TP  KV KKRGRKK     NPEEVNSS P  DD E+RSKFYESASARKRT T EERER
Sbjct:  59 EETP--KVLKKRGRKKKNP--NPEEVNSSTPGGDDSENRSKFYESASARKRTVTAEERER 114

Query: 566 AINTSKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLGEKQWPVR 387
           A+N +KTFEPTNP+FRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIK+QLGEKQWPVR
Sbjct: 115 AVNAAKTFEPTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGEKQWPVR 174

Query: 386 CLYKAGRAKFSQGWYEFTVENNLGEGDVCVFELLRTRDFVLKVTAFRVN 240
           CLYKAGRAKFSQGWYEFT+ENN+GEGDVCVFELLRTRDFVL+VTAFRVN
Sbjct: 175 CLYKAGRAKFSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAFRVN 223

>TAIR9_protein||AT5G18000.1 | Symbols:  | transcriptional factor B3 family
        protein | chr5:5960071-5961473 REVERSE

          Length = 308

 Score =  49 bits (114), Expect = 9e-006
 Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
 Frame = -1

Query: 626 KFYESASARKRTATTEERERAINTSKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKY 447
           K  +S +++K+   T   +    TS       P F++ ++ S+L     + +P  F + +
Sbjct: 187 KTEKSKTSKKKKVETVSNDSEAGTSSLI----PEFKLTIKKSHL---LFLGIPKKFVDMH 239

Query: 446 LSGISGFIKVQL--GEKQWPVRCLYKAGRAKFSQGWYEFTVENNLGEGDVCVFELLRTRD 273
           +   +   K+    G+K W V  +    +++FS GW     E  L  GDVC F+L++  +
Sbjct: 240 MPTETTMFKIHYPRGKKSWDVTYVVTDVQSRFSGGWSRLAKELGLLVGDVCTFKLIKPTE 299

Query: 272 FVLKVT 255
             +KV+
Sbjct: 300 MRVKVS 305

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,478,368,900
Number of Sequences: 33410
Number of Extensions: 20478368900
Number of Successful Extensions: 653222650
Number of sequences better than 0.0: 0