BLASTX 7.6.2
Query= UN41278 /QuerySize=640
(639 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G19740.1 | Symbols: | 60S ribosomal protein L... 233 9e-062
TAIR9_protein||AT5G56710.1 | Symbols: | 60S ribosomal protein L... 218 2e-057
TAIR9_protein||AT4G26230.1 | Symbols: | 60S ribosomal protein L... 218 3e-057
TAIR9_protein||AT5G56710.2 | Symbols: | 60S ribosomal protein L... 101 7e-022
>TAIR9_protein||AT2G19740.1 | Symbols: | 60S ribosomal protein L31 (RPL31A) |
chr2:8513577-8514346 FORWARD
Length = 120
Score = 233 bits (593), Expect = 9e-062
Identities = 114/120 (95%), Positives = 119/120 (99%)
Frame = +1
Query: 52 MEKGRGRKEEIVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 231
MEKG+GRKEE+VTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN
Sbjct: 1 MEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 60
Query: 232 KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFYSLVTVAEIPAEGLSGLGTKVIDEDE* 411
KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEF+SLVTVAEIPAEGLSGLGTKVI+E+E*
Sbjct: 61 KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE* 120
>TAIR9_protein||AT5G56710.1 | Symbols: | 60S ribosomal protein L31 (RPL31C) |
chr5:22944003-22944767 REVERSE
Length = 120
Score = 218 bits (555), Expect = 2e-057
Identities = 106/120 (88%), Positives = 114/120 (95%)
Frame = +1
Query: 52 MEKGRGRKEEIVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 231
M + +GRKEE++TREYTINLHRRLH CTFKKKAP AIKEIRKFA KAMGTKDVRVDVKLN
Sbjct: 1 MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60
Query: 232 KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFYSLVTVAEIPAEGLSGLGTKVIDEDE* 411
KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEF+SLVTVAEIPAEGLSGLGTKVI+E++*
Sbjct: 61 KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED* 120
>TAIR9_protein||AT4G26230.1 | Symbols: | 60S ribosomal protein L31 (RPL31B) |
chr4:13286026-13286553 FORWARD
Length = 120
Score = 218 bits (554), Expect = 3e-057
Identities = 106/120 (88%), Positives = 114/120 (95%)
Frame = +1
Query: 52 MEKGRGRKEEIVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 231
M + +GRKEE+VTREYTINLHRRLHSCTFKKKAP AIKEIRKFA K MGTKDVRVDVKLN
Sbjct: 1 MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLN 60
Query: 232 KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFYSLVTVAEIPAEGLSGLGTKVIDEDE* 411
KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEF+SLVTVAEIPAEGLSGLGTK+I+E++*
Sbjct: 61 KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED* 120
>TAIR9_protein||AT5G56710.2 | Symbols: | 60S ribosomal protein L31 (RPL31C) |
chr5:22944003-22944767 REVERSE
Length = 86
Score = 101 bits (249), Expect = 7e-022
Identities = 47/56 (83%), Positives = 51/56 (91%)
Frame = +1
Query: 52 MEKGRGRKEEIVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVD 219
M + +GRKEE++TREYTINLHRRLH CTFKKKAP AIKEIRKFA KAMGTKDVRVD
Sbjct: 1 MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD 56
Score = 55 bits (132), Expect = 2e-008
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Frame = +1
Query: 223 KLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAK--EEFYSLVTVAEIPAEGLSGLGTKVI 396
+L+K + K + IR + A K +D + EEF+SLVTVAEIPAEGLSGLGTKVI
Sbjct: 23 RLHKCTFKKKAPKAIKEIR-KFAEKAMGTKDVRVDEEFFSLVTVAEIPAEGLSGLGTKVI 81
Query: 397 DEDE* 411
+E++*
Sbjct: 82 EEED* 86
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,478,368,900
Number of Sequences: 33410
Number of Extensions: 20478368900
Number of Successful Extensions: 653222650
Number of sequences better than 0.0: 0
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