BLASTX 7.6.2
Query= UN41307 /QuerySize=794
(793 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G26190.1 | Symbols: | FUNCTIONS IN: molecular... 157 1e-038
>TAIR9_protein||AT4G26190.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NLI
interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT2G36550.1); Has 24148 Blast
hits to 14674 proteins in 713 species: Archae - 56; Bacteria - 1518;
Metazoa - 9576; Fungi - 1916; Plants - 955; Viruses - 87; Other
Eukaryotes - 10040 (source: NCBI BLink). | chr4:13262473-13266282
REVERSE
Length = 1068
Score = 157 bits (395), Expect = 1e-038
Identities = 99/218 (45%), Positives = 132/218 (60%), Gaps = 27/218 (12%)
Frame = -2
Query: 597 VAVPETGVTL-HIDPTE-EDSPPHENMSGSSRKKLKRRKKKKKIEEALCEEEKTLDVSDK 424
V+ E TL H DP EDS P +N GSS KK KRR+KKKK E+ C EEK LD +K
Sbjct: 103 VSCEEPRATLHHTDPISCEDSLPDDNRKGSSTKKSKRREKKKKKEDLSC-EEKLLDEVEK 161
Query: 423 NTDENQTHPPKNPLSNITMQEDSCQQAKDSCEMP--------------EDSQSGAVDMTS 286
T E+Q HPP NPLSN +QE S + +DSCE P +DS A +MTS
Sbjct: 162 ITSEDQVHPPNNPLSNGMVQERSGELTQDSCEKPGAAQICTDPNLSTCKDSLPDATNMTS 221
Query: 285 SERKKKRRKKKKGITDINASRENGVD---TNSEVTTKRDTRHSFEAQGSKLKSTEEKIVE 115
S ++K+ +++ D N +E+GVD TN+EV +T + EA+GS+ S EE V
Sbjct: 222 SSKRKRNKRR-----DRNVLKESGVDIGSTNAEVAVTDNT--TTEAEGSRSMSIEENSVA 274
Query: 114 STVVNGCLKSKDDTVDQQEGADAKADDTVSETQNPKAK 1
S ++NGCLKSK DTV+Q +G D + ++TV +TQ+ KAK
Sbjct: 275 SVLINGCLKSKVDTVEQLDGTDVQINETVFQTQSTKAK 312
Score = 67 bits (163), Expect = 9e-012
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Frame = -2
Query: 240 DINASRENGVDTNSEV-TTKRDTRHSFEAQGSKLKSTEEKIVESTVVNGCLKSKDDTVDQ 64
D N ++ + +V K DT EA+GSK + EEK V S V++ CLKSKDDTV+Q
Sbjct: 348 DGNKEKDGNTEVKEDVREVKYDT--ISEAEGSKSTTKEEKSVASVVISSCLKSKDDTVEQ 405
Query: 63 QEGADAKADDTVSETQNPKAK 1
+E D +TV++TQ+PKAK
Sbjct: 406 KECTDVNISETVAQTQDPKAK 426
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,478,368,900
Number of Sequences: 33410
Number of Extensions: 20478368900
Number of Successful Extensions: 653222650
Number of sequences better than 0.0: 0
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