BLASTX 7.6.2
Query= UN41450 /QuerySize=717
(716 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=... 216 1e-055
sp|Q9ZUU4|ROC1_ARATH Ribonucleoprotein At2g37220, chloroplastic ... 177 7e-044
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O... 145 3e-034
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=... 145 4e-034
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=... 145 4e-034
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O... 143 2e-033
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=... 115 3e-025
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=... 111 5e-024
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=... 107 9e-023
sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=... 106 2e-022
sp|Q43472|GRP_HORVU Glycine-rich RNA-binding protein blt801 OS=H... 92 4e-018
sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A OS=S... 91 5e-018
sp|Q03250|GRP7_ARATH Glycine-rich RNA-binding protein 7 OS=Arabi... 90 1e-017
sp|P49311|GRP2_SINAL Glycine-rich RNA-binding protein GRP2A OS=S... 88 6e-017
sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitocho... 87 1e-016
sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2 OS=Sorgh... 86 3e-016
sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Bra... 85 5e-016
sp|Q03878|GRP1_DAUCA Glycine-rich RNA-binding protein OS=Daucus ... 84 8e-016
sp|P10979|GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-ind... 84 1e-015
>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
thaliana GN=RBP29 PE=1 SV=2
Length = 342
Score = 216 bits (550), Expect = 1e-055
Identities = 115/142 (80%), Positives = 123/142 (86%), Gaps = 7/142 (4%)
Frame = -3
Query: 663 RSGGYGSER-GGYGSER-SGYGSQRSGRSGYGSERSSYGSERSSYGSGSGSGSGSSDRVY 490
R GGYGSER GGYGSER GYGSQRSG GS+RSSYGS GSGSGSGSGS +R+Y
Sbjct: 206 RGGGYGSERGGGYGSERGGGYGSQRSGGGYGGSQRSSYGS-----GSGSGSGSGSGNRLY 260
Query: 489 VGNLSWGVDDTALESLFSEQGKVVEARVIYDRDTGRSEGFGFVTLGSPQEVTRAINSLNG 310
VGNLSWGVDD ALE+LF+EQGKVVEARVIYDRD+GRS+GFGFVTL S QEV +AINSLNG
Sbjct: 261 VGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNG 320
Query: 309 ADLDGRQIRVSEAEARPPRRQF 244
ADLDGRQIRVSEAEARPPR QF
Sbjct: 321 ADLDGRQIRVSEAEARPPRGQF 342
>sp|Q9ZUU4|ROC1_ARATH Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis
thaliana GN=At2g37220 PE=1 SV=1
Length = 289
Score = 177 bits (448), Expect = 7e-044
Identities = 88/108 (81%), Positives = 95/108 (87%)
Frame = -3
Query: 567 RSSYGSERSSYGSGSGSGSGSSDRVYVGNLSWGVDDTALESLFSEQGKVVEARVIYDRDT 388
RSS+GS S YG G GSG+GS +RVYVGNLSWGVDD ALESLFSEQGKVVEARVIYDRD+
Sbjct: 182 RSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDS 241
Query: 387 GRSEGFGFVTLGSPQEVTRAINSLNGADLDGRQIRVSEAEARPPRRQF 244
GRS+GFGFVT S QEV AI SL+GADLDGRQIRVSEAEARPPRRQ+
Sbjct: 242 GRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPRRQY 289
>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana
sylvestris PE=2 SV=1
Length = 291
Score = 145 bits (365), Expect = 3e-034
Identities = 77/125 (61%), Positives = 88/125 (70%), Gaps = 5/125 (4%)
Frame = -3
Query: 621 ERSGYGSQRSGRSGYGSERSSYGSERSSYGSGSGSGS-GSSDRVYVGNLSWGVDDTALES 445
E S +G R G S YG R SS+G G S SS+RVYVGNLSWGVDD AL+
Sbjct: 170 ENSSFGGGRGGNSSYGGGRDG----NSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKE 225
Query: 444 LFSEQGKVVEARVIYDRDTGRSEGFGFVTLGSPQEVTRAINSLNGADLDGRQIRVSEAEA 265
LFSEQG VV+A+V+YDRD+GRS GFGFVT S +EV AI+SLNG DLDGR IRVS AE
Sbjct: 226 LFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAEE 285
Query: 264 RPPRR 250
RP R+
Sbjct: 286 RPRRQ 290
>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
plumbaginifolia PE=2 SV=1
Length = 279
Score = 145 bits (364), Expect = 4e-034
Identities = 74/110 (67%), Positives = 85/110 (77%), Gaps = 1/110 (0%)
Frame = -3
Query: 570 ERSSYGSERSSYGSGSGSGS-GSSDRVYVGNLSWGVDDTALESLFSEQGKVVEARVIYDR 394
E SS+ S G G GS SS+RVYVGNL+WGVD ALE+LFSEQGKVV+A+V+YDR
Sbjct: 170 ENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDR 229
Query: 393 DTGRSEGFGFVTLGSPQEVTRAINSLNGADLDGRQIRVSEAEARPPRRQF 244
D+GRS GFGFVT S +EV AI SL+G DL+GR IRVS AEARPPRRQF
Sbjct: 230 DSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 279
>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
plumbaginifolia PE=2 SV=1
Length = 292
Score = 145 bits (364), Expect = 4e-034
Identities = 77/125 (61%), Positives = 88/125 (70%), Gaps = 5/125 (4%)
Frame = -3
Query: 621 ERSGYGSQRSGRSGYGSERSSYGSERSSYGSGSGSGS-GSSDRVYVGNLSWGVDDTALES 445
E S +G R G S YG R SS+G G S SS+RVYVGNLSWGVDD AL+
Sbjct: 171 ENSSFGGGRGGNSSYGGGRDG----NSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKE 226
Query: 444 LFSEQGKVVEARVIYDRDTGRSEGFGFVTLGSPQEVTRAINSLNGADLDGRQIRVSEAEA 265
LFSEQG VV+A+V+YDRD+GRS GFGFVT S +EV AI+SLNG DLDGR IRVS AE
Sbjct: 227 LFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEE 286
Query: 264 RPPRR 250
RP R+
Sbjct: 287 RPRRQ 291
>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana
sylvestris PE=2 SV=1
Length = 273
Score = 143 bits (358), Expect = 2e-033
Identities = 74/104 (71%), Positives = 85/104 (81%), Gaps = 2/104 (1%)
Frame = -3
Query: 549 ERSSYGSGS-GSGS-GSSDRVYVGNLSWGVDDTALESLFSEQGKVVEARVIYDRDTGRSE 376
E SS+ GS G GS SS+RVYVGNL+WGVD ALE+LFSEQGKVV+A+V+YDRD+GRS
Sbjct: 170 ENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSR 229
Query: 375 GFGFVTLGSPQEVTRAINSLNGADLDGRQIRVSEAEARPPRRQF 244
GFGFVT S +EV AI SL+G DL+GR IRVS AEARPPRRQF
Sbjct: 230 GFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 273
Score = 83 bits (204), Expect = 1e-015
Identities = 47/118 (39%), Positives = 67/118 (56%), Gaps = 6/118 (5%)
Frame = -3
Query: 498 RVYVGNLSWGVDDTALESLFSEQGKVVEARVIYDRDTGRSEGFGFVTLGSPQEVTRAINS 319
+++VGNL + D AL LF G V VIYD+ TGRS GFGFVT+ S +EV A
Sbjct: 88 KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147
Query: 318 LNGADLDGRQIRVSEAEARPPRRQF*ATMSLHCSKRNGGVGSS*LTNKLFIYVLSFGL 145
NG +LDGR +RV+ PP ++ S R GG S +N++++ L++G+
Sbjct: 148 FNGYELDGRALRVNSGP--PPEKR--ENSSFRGGSRGGGSFDS--SNRVYVGNLAWGV 199
>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
thaliana GN=RBP31 PE=1 SV=1
Length = 329
Score = 115 bits (287), Expect = 3e-025
Identities = 55/85 (64%), Positives = 67/85 (78%)
Frame = -3
Query: 498 RVYVGNLSWGVDDTALESLFSEQGKVVEARVIYDRDTGRSEGFGFVTLGSPQEVTRAINS 319
RVYVGNL W VD+ LE LFSE GKVVEARV+YDR+TGRS GFGFVT+ E+ AI++
Sbjct: 245 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 304
Query: 318 LNGADLDGRQIRVSEAEARPPRRQF 244
L+G +L+GR IRV+ AE RPPRR +
Sbjct: 305 LDGQNLEGRAIRVNVAEERPPRRGY 329
>sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 315
Score = 111 bits (277), Expect = 5e-024
Identities = 54/87 (62%), Positives = 65/87 (74%)
Frame = -3
Query: 504 SDRVYVGNLSWGVDDTALESLFSEQGKVVEARVIYDRDTGRSEGFGFVTLGSPQEVTRAI 325
S R+YVGN+ WG+DD LE LFSE GKVV ARV+YDR+TGRS GFGFVT+ S E++ AI
Sbjct: 229 SYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAI 288
Query: 324 NSLNGADLDGRQIRVSEAEARPPRRQF 244
+L+G LDGR IRV+ AE R R F
Sbjct: 289 ANLDGQSLDGRTIRVNVAEDRSRRNTF 315
>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 276
Score = 107 bits (266), Expect = 9e-023
Identities = 49/85 (57%), Positives = 64/85 (75%)
Frame = -3
Query: 498 RVYVGNLSWGVDDTALESLFSEQGKVVEARVIYDRDTGRSEGFGFVTLGSPQEVTRAINS 319
R+YVGN+ W +DD LE +FSE GKVV ARV++DR++GRS GFGFVT+ S E++ AI +
Sbjct: 192 RIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIAN 251
Query: 318 LNGADLDGRQIRVSEAEARPPRRQF 244
L+G LDGR IRV+ AE RP R +
Sbjct: 252 LDGQTLDGRTIRVNAAEERPRRNTY 276
>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia
oleracea PE=1 SV=1
Length = 233
Score = 106 bits (264), Expect = 2e-022
Identities = 54/84 (64%), Positives = 62/84 (73%)
Frame = -3
Query: 504 SDRVYVGNLSWGVDDTALESLFSEQGKVVEARVIYDRDTGRSEGFGFVTLGSPQEVTRAI 325
S RVYVGNL W VD + LE LFSE GKVV ARV+ DR+TGRS GFGFVT+ S EV AI
Sbjct: 148 SCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAI 207
Query: 324 NSLNGADLDGRQIRVSEAEARPPR 253
+L+G LDGR +RV+ AE RP R
Sbjct: 208 AALDGQTLDGRAVRVNVAEERPRR 231
>sp|Q43472|GRP_HORVU Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare
GN=blt801 PE=1 SV=1
Length = 161
Score = 92 bits (226), Expect = 4e-018
Identities = 40/79 (50%), Positives = 59/79 (74%)
Frame = -3
Query: 498 RVYVGNLSWGVDDTALESLFSEQGKVVEARVIYDRDTGRSEGFGFVTLGSPQEVTRAINS 319
R +VG L W DD +L++ FS+ G V+++++I DR+TGRS GFGFVT S + + +AI +
Sbjct: 7 RCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 318 LNGADLDGRQIRVSEAEAR 262
+NG DLDGR I V+EA++R
Sbjct: 67 MNGQDLDGRNITVNEAQSR 85
>sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba
PE=2 SV=1
Length = 166
Score = 91 bits (225), Expect = 5e-018
Identities = 41/79 (51%), Positives = 58/79 (73%)
Frame = -3
Query: 498 RVYVGNLSWGVDDTALESLFSEQGKVVEARVIYDRDTGRSEGFGFVTLGSPQEVTRAINS 319
R +VG L+W DD ALE+ FS+ G+V+++++I DR+TGRS GFGFVT + + AI
Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 318 LNGADLDGRQIRVSEAEAR 262
+NG DLDGR I V+EA++R
Sbjct: 69 MNGQDLDGRSITVNEAQSR 87
>sp|Q03250|GRP7_ARATH Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana
GN=GRP7 PE=1 SV=1
Length = 176
Score = 90 bits (221), Expect = 1e-017
Identities = 40/79 (50%), Positives = 57/79 (72%)
Frame = -3
Query: 498 RVYVGNLSWGVDDTALESLFSEQGKVVEARVIYDRDTGRSEGFGFVTLGSPQEVTRAINS 319
R +VG L+W DD ALE+ F++ G V+++++I DR+TGRS GFGFVT + + AI
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 318 LNGADLDGRQIRVSEAEAR 262
+NG DLDGR I V+EA++R
Sbjct: 69 MNGQDLDGRSITVNEAQSR 87
>sp|P49311|GRP2_SINAL Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba
PE=2 SV=1
Length = 169
Score = 88 bits (216), Expect = 6e-017
Identities = 39/79 (49%), Positives = 58/79 (73%)
Frame = -3
Query: 498 RVYVGNLSWGVDDTALESLFSEQGKVVEARVIYDRDTGRSEGFGFVTLGSPQEVTRAINS 319
R +VG L+W D+ +LE+ FS+ G++V++++I DR+TGRS GFGFVT + + AI
Sbjct: 9 RCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 318 LNGADLDGRQIRVSEAEAR 262
+NG DLDGR I V+EA++R
Sbjct: 69 MNGQDLDGRSITVNEAQSR 87
>sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial
OS=Arabidopsis thaliana GN=GRP2 PE=1 SV=1
Length = 158
Score = 87 bits (214), Expect = 1e-016
Identities = 40/82 (48%), Positives = 55/82 (67%)
Frame = -3
Query: 504 SDRVYVGNLSWGVDDTALESLFSEQGKVVEARVIYDRDTGRSEGFGFVTLGSPQEVTRAI 325
S ++++G LSWG DD +L F+ G VV+A+VI DR+TGRS GFGFV T AI
Sbjct: 34 STKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAI 93
Query: 324 NSLNGADLDGRQIRVSEAEARP 259
+ ++G +L+GR IRV+ A RP
Sbjct: 94 SEMDGKELNGRHIRVNPANDRP 115
>sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor
GN=GRP2 PE=2 SV=1
Length = 168
Score = 86 bits (210), Expect = 3e-016
Identities = 38/79 (48%), Positives = 57/79 (72%)
Frame = -3
Query: 498 RVYVGNLSWGVDDTALESLFSEQGKVVEARVIYDRDTGRSEGFGFVTLGSPQEVTRAINS 319
R +VG L+W ++ LE F+ G+V++++VI DR+TGRS GFGFVT S Q + AI +
Sbjct: 9 RCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIEN 68
Query: 318 LNGADLDGRQIRVSEAEAR 262
+NG +LDGR I V++A++R
Sbjct: 69 MNGKELDGRNITVNQAQSR 87
>sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Brassica napus
GN=GRP10 PE=2 SV=1
Length = 169
Score = 85 bits (208), Expect = 5e-016
Identities = 38/79 (48%), Positives = 56/79 (70%)
Frame = -3
Query: 498 RVYVGNLSWGVDDTALESLFSEQGKVVEARVIYDRDTGRSEGFGFVTLGSPQEVTRAINS 319
R +VG L+W D LE FS+ G+V+++++I DR+TGRS GFGFVT + + AI+
Sbjct: 7 RCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDE 66
Query: 318 LNGADLDGRQIRVSEAEAR 262
+NG +LDGR I V+EA++R
Sbjct: 67 MNGKELDGRTITVNEAQSR 85
>sp|Q03878|GRP1_DAUCA Glycine-rich RNA-binding protein OS=Daucus carota PE=2
SV=1
Length = 157
Score = 84 bits (206), Expect = 8e-016
Identities = 37/79 (46%), Positives = 55/79 (69%)
Frame = -3
Query: 498 RVYVGNLSWGVDDTALESLFSEQGKVVEARVIYDRDTGRSEGFGFVTLGSPQEVTRAINS 319
R +VG L+W +D +LE FS+ G + ++++I DR+TGRS GFGFVT + + AI
Sbjct: 7 RCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEG 66
Query: 318 LNGADLDGRQIRVSEAEAR 262
+NG +LDGR I V+EA++R
Sbjct: 67 MNGQELDGRNITVNEAQSR 85
>sp|P10979|GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-inducible protein
OS=Zea mays GN=RAB15 PE=1 SV=1
Length = 157
Score = 84 bits (205), Expect = 1e-015
Identities = 36/79 (45%), Positives = 57/79 (72%)
Frame = -3
Query: 498 RVYVGNLSWGVDDTALESLFSEQGKVVEARVIYDRDTGRSEGFGFVTLGSPQEVTRAINS 319
R +VG L+W + +LE+ F+ G++++++VI DR+TGRS GFGFVT S + AI +
Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 318 LNGADLDGRQIRVSEAEAR 262
+NG +LDGR I V++A++R
Sbjct: 69 MNGKELDGRNITVNQAQSR 87
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 159,249,259,203
Number of Sequences: 518415
Number of Extensions: 159249259203
Number of Successful Extensions: 968868021
Number of sequences better than 0.0: 0
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