BLASTX 7.6.2
Query= UN41518 /QuerySize=775
(774 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G55680.1 | Symbols: | WD-40 repeat family pro... 296 1e-080
TAIR9_protein||AT3G13340.1 | Symbols: | WD-40 repeat family pro... 289 2e-078
TAIR9_protein||AT5G56190.1 | Symbols: | WD-40 repeat family pro... 220 1e-057
TAIR9_protein||AT5G56190.2 | Symbols: | WD-40 repeat family pro... 220 1e-057
TAIR9_protein||AT1G78070.1 | Symbols: | FUNCTIONS IN: molecular... 149 3e-036
TAIR9_protein||AT1G36070.1 | Symbols: | WD-40 repeat family pro... 130 1e-030
>TAIR9_protein||AT1G55680.1 | Symbols: | WD-40 repeat family protein |
chr1:20804988-20807294 REVERSE
Length = 446
Score = 296 bits (756), Expect = 1e-080
Identities = 143/168 (85%), Positives = 157/168 (93%), Gaps = 5/168 (2%)
Frame = +3
Query: 189 EDAAYMDHVVDDDDDMEDVDDDLDDDFHGDDMAASDSDVDEFDYSSNKIADTSAEQARKG 368
+DA YM+ D DD+M+ +DDLD+DF GDDMAASDSDVDEFDYS+NKIADTSA+QARKG
Sbjct: 7 DDAEYME---DVDDEMD--EDDLDEDFRGDDMAASDSDVDEFDYSNNKIADTSADQARKG 61
Query: 369 KDIQGIPWDRLSITREKYRQTRLDQYKNYENVPNSGDSSGKDCMVTQKGAIFYDFWRNSR 548
KDIQGIPWDRLSITRE YRQTRL+QYKNYENVPNSG+SSGKDCM TQKGA+FYDFWRN+R
Sbjct: 62 KDIQGIPWDRLSITRETYRQTRLEQYKNYENVPNSGESSGKDCMATQKGALFYDFWRNTR 121
Query: 549 SIKSSILHFQLRNLVWATSKHDVYLMSQFLVSHYSTLTCGKHEVLNVQ 692
SIKSSILHFQLRNLVWATSKHDVYLMSQ+LVSHYSTLT GKH+VLNVQ
Sbjct: 122 SIKSSILHFQLRNLVWATSKHDVYLMSQYLVSHYSTLTSGKHDVLNVQ 169
>TAIR9_protein||AT3G13340.1 | Symbols: | WD-40 repeat family protein |
chr3:4332370-4334603 FORWARD
Length = 448
Score = 289 bits (738), Expect = 2e-078
Identities = 135/171 (78%), Positives = 157/171 (91%), Gaps = 3/171 (1%)
Frame = +3
Query: 180 YQAEDAAYMDHVVDDDDDMEDVDDDLDDDFHGDDMAASDSDVDEFDYSSNKIADTSAEQA 359
Y+ +DA YM+ D DD+MEDV+DD+D++F GDD+ ASDSDV+EFDYS+NK+ADT+AEQA
Sbjct: 4 YRGDDAEYME---DVDDEMEDVEDDMDEEFRGDDLGASDSDVEEFDYSNNKVADTTAEQA 60
Query: 360 RKGKDIQGIPWDRLSITREKYRQTRLDQYKNYENVPNSGDSSGKDCMVTQKGAIFYDFWR 539
RKGKDIQGIPWDRL+I+REKYRQTRL+QYKNYENVPNSG+SS K C VTQKG +FYDFWR
Sbjct: 61 RKGKDIQGIPWDRLNISREKYRQTRLEQYKNYENVPNSGESSEKVCKVTQKGGLFYDFWR 120
Query: 540 NSRSIKSSILHFQLRNLVWATSKHDVYLMSQFLVSHYSTLTCGKHEVLNVQ 692
NSRSIKS+ILHFQLRNLVWATSKHDVYLMS FLV+HYS+LT GKHEVLNV+
Sbjct: 121 NSRSIKSTILHFQLRNLVWATSKHDVYLMSNFLVTHYSSLTSGKHEVLNVR 171
>TAIR9_protein||AT5G56190.1 | Symbols: | WD-40 repeat family protein |
chr5:22742563-22744909 FORWARD
Length = 442
Score = 220 bits (559), Expect = 1e-057
Identities = 104/165 (63%), Positives = 135/165 (81%), Gaps = 1/165 (0%)
Frame = +3
Query: 198 AYMDHVVDDDDDMEDVDDDLDDDFHGDDMAASDSDVDEFDYSSNKIADTSAEQARKGKDI 377
A D + D+ DM+D++DD++ F G D+ ASDS+V++FD NK ADTSA QAR GKDI
Sbjct: 2 ADFDEYMADEYDMDDLEDDMNAAFDGRDIDASDSEVEDFD-QLNKAADTSAAQARNGKDI 60
Query: 378 QGIPWDRLSITREKYRQTRLDQYKNYENVPNSGDSSGKDCMVTQKGAIFYDFWRNSRSIK 557
QGIPWD L++TR+ YR+TRL+QYKNYEN+PNSGD S K CM T+KG+ FY+F RNSRS++
Sbjct: 61 QGIPWDSLTLTRKDYRKTRLEQYKNYENIPNSGDESAKKCMNTEKGSSFYEFRRNSRSVR 120
Query: 558 SSILHFQLRNLVWATSKHDVYLMSQFLVSHYSTLTCGKHEVLNVQ 692
S+ILHFQLRNLVWATSKHDVYL+S + +SH+S+LT + E+LNV+
Sbjct: 121 STILHFQLRNLVWATSKHDVYLLSNYSISHWSSLTGCRSEILNVK 165
>TAIR9_protein||AT5G56190.2 | Symbols: | WD-40 repeat family protein |
chr5:22742654-22744909 FORWARD
Length = 448
Score = 220 bits (559), Expect = 1e-057
Identities = 105/172 (61%), Positives = 138/172 (80%), Gaps = 3/172 (1%)
Frame = +3
Query: 177 NYQAEDAAYMDHVVDDDDDMEDVDDDLDDDFHGDDMAASDSDVDEFDYSSNKIADTSAEQ 356
+Y +D D + D+ DM+D++DD++ F G D+ ASDS+V++FD NK ADTSA Q
Sbjct: 3 DYNGDDLE--DEYMADEYDMDDLEDDMNAAFDGRDIDASDSEVEDFD-QLNKAADTSAAQ 59
Query: 357 ARKGKDIQGIPWDRLSITREKYRQTRLDQYKNYENVPNSGDSSGKDCMVTQKGAIFYDFW 536
AR GKDIQGIPWD L++TR+ YR+TRL+QYKNYEN+PNSGD S K CM T+KG+ FY+F
Sbjct: 60 ARNGKDIQGIPWDSLTLTRKDYRKTRLEQYKNYENIPNSGDESAKKCMNTEKGSSFYEFR 119
Query: 537 RNSRSIKSSILHFQLRNLVWATSKHDVYLMSQFLVSHYSTLTCGKHEVLNVQ 692
RNSRS++S+ILHFQLRNLVWATSKHDVYL+S + +SH+S+LT + E+LNV+
Sbjct: 120 RNSRSVRSTILHFQLRNLVWATSKHDVYLLSNYSISHWSSLTGCRSEILNVK 171
>TAIR9_protein||AT1G78070.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING
ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like
(InterPro:IPR011046), WD40 repeat, region (InterPro:IPR017986),
WD40/YVTN repeat-like (InterPro:IPR015943), WD40 repeat
(InterPro:IPR001680); BEST Arabidopsis thaliana protein match is: WD-40
repeat family protein (TAIR:AT1G36070.1); Has 110 Blast hits to 110
proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
28; Plants - 80; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink). | chr1:29355219-29358368 FORWARD
Length = 450
Score = 149 bits (374), Expect = 3e-036
Identities = 79/168 (47%), Positives = 110/168 (65%), Gaps = 12/168 (7%)
Frame = +3
Query: 222 DDDDMEDVDDDLDDDFHGDDM-----AASDSDVD------EFDYSSNKI-ADTSAEQARK 365
D+ D+E + D+ DF D+ S+SD D +F+ S +K +TSA +AR
Sbjct: 5 DNSDLEYLVDEFHADFDDDEPFGEVDVTSESDSDFMDSDFDFELSESKTNNETSALEARN 64
Query: 366 GKDIQGIPWDRLSITREKYRQTRLDQYKNYENVPNSGDSSGKDCMVTQKGAIFYDFWRNS 545
GKDIQGIPW+ L+ TR++YR+ RL YKN+E++ S + K+C+ +KG FYDF N+
Sbjct: 65 GKDIQGIPWESLNYTRDRYRENRLLHYKNFESLFRSREELDKECLQVEKGKNFYDFQFNT 124
Query: 546 RSIKSSILHFQLRNLVWATSKHDVYLMSQFLVSHYSTLTCGKHEVLNV 689
R +KS+I HFQLRNLVWATSKHDVY M+ + + H+S+L EVLNV
Sbjct: 125 RLVKSTIAHFQLRNLVWATSKHDVYFMNNYSLMHWSSLLQRGKEVLNV 172
>TAIR9_protein||AT1G36070.1 | Symbols: | WD-40 repeat family protein |
chr1:13467164-13470386 REVERSE
Length = 419
Score = 130 bits (326), Expect = 1e-030
Identities = 67/140 (47%), Positives = 92/140 (65%), Gaps = 3/140 (2%)
Frame = +3
Query: 279 DMAASDSDVDEFDYSSNKIADTSAEQARKGKDIQGIPWDRLSITREKYRQTRLDQYKNYE 458
+ DSD ++ + DTSA++AR GKDIQGI W+ R+++R+TRL QY N+
Sbjct: 2 EQTKDDSDFEDDCETKKMETDTSAQEARNGKDIQGIQWEGFKYNRDEFRETRLKQYDNFV 61
Query: 459 NV--PNSGDSSGKD-CMVTQKGAIFYDFWRNSRSIKSSILHFQLRNLVWATSKHDVYLMS 629
N+ P+S + K+ V +KG FYDF N+R + S+I+HFQLRNLVWATSKHDVYLM
Sbjct: 62 NILRPSSREKLDKEHGQVVEKGKNFYDFQFNTRLVTSTIVHFQLRNLVWATSKHDVYLMQ 121
Query: 630 QFLVSHYSTLTCGKHEVLNV 689
+ + H+S+L EVLNV
Sbjct: 122 NYSLMHWSSLLQRGKEVLNV 141
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,572,546,445
Number of Sequences: 33410
Number of Extensions: 20572546445
Number of Successful Extensions: 658650332
Number of sequences better than 0.0: 0
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