BLASTX 7.6.2
Query= UN41523 /QuerySize=1247
(1246 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G34340.1 | Symbols: TAF8 | TAF8 (TBP-ASSOCIATE... 455 5e-128
TAIR9_protein||AT1G31240.1 | Symbols: | DNA binding | chr1:1116... 69 7e-012
TAIR9_protein||AT3G02160.1 | Symbols: | DNA binding | chr3:3946... 57 3e-008
TAIR9_protein||AT5G15570.1 | Symbols: | FUNCTIONS IN: molecular... 57 3e-008
>TAIR9_protein||AT4G34340.1 | Symbols: TAF8 | TAF8 (TBP-ASSOCIATED FACTOR 8);
DNA binding | chr4:16426771-16427832 REVERSE
Length = 354
Score = 455 bits (1168), Expect = 5e-128
Identities = 257/375 (68%), Positives = 294/375 (78%), Gaps = 41/375 (10%)
Frame = -2
Query: 1218 MSLERTTHDDGDIKDPPSSS----SYEFTHAAAKSAVAQICGSVGYSHFKDPPLESLTGF 1051
M+ ER +GD D SSS SYEF+HAAAK+AVAQ+C SVGY +FKDP LESL+GF
Sbjct: 1 MNTERA--QEGDRNDAASSSGCSESYEFSHAAAKAAVAQVCESVGYENFKDPALESLSGF 58
Query: 1050 AIQYVLGLGKSATSFANLNGRSQCNVFDIVLALEDLSGGGDDEERVASLESCL--RSVRL 877
A+QY+L LGK+ATSFANL GRSQCNVFDI+LAL+DL+ ++ E+ S ESC RS++L
Sbjct: 59 ALQYILQLGKTATSFANLTGRSQCNVFDIILALDDLT--DNNGEQGISSESCSLGRSIKL 116
Query: 876 REIIEFVNSSGDEEEEEEEEESPFLQTLPCFPV-----RRKMMMMKVPSFVEVGETPPGK 712
REII+FVNSS EE PF Q LP FPV RKM +PSFVE+GETPPGK
Sbjct: 117 REIIDFVNSS---------EEVPFSQPLPSFPVAISDRSRKM----IPSFVEIGETPPGK 163
Query: 711 HIPLWLPAFPDPHTYKETPMWIERGLDPRGDKIEQARQRRKAERALLSLQRKLVCRISSG 532
HIPLWLPAFPDPHTYKETPMWIER DPRGDKIEQARQRRKAERALLSLQRKLVC+ISS
Sbjct: 164 HIPLWLPAFPDPHTYKETPMWIERVSDPRGDKIEQARQRRKAERALLSLQRKLVCKISS- 222
Query: 531 GDRVWGDMLDGTTVKDDIREAESE----EEEDKVDSLKRDGLSVVEAFAPALEAAREW-- 370
+ VWGDM DG VK+++R+ ESE +KV+SL RDGLSV+EAFAPA+EAAR+
Sbjct: 223 RNPVWGDM-DG--VKEEMRDDESELRSVSSGEKVESLNRDGLSVIEAFAPAMEAARDGFS 279
Query: 369 --KQQQQKKKKPGALSKLRTEKKFLGEPLDLTLQMKGEDRPLS-LREEDRDDKRRRAEFI 199
+ KK KP ALSKLRTEKKFLG+PLDL+LQMKGEDRP+S +REEDRDDKRRRAEFI
Sbjct: 280 SEAHTEWKKNKPVALSKLRTEKKFLGQPLDLSLQMKGEDRPISFVREEDRDDKRRRAEFI 339
Query: 198 LRQCMENPVDLNQL* 154
LRQCMENPVDLNQL*
Sbjct: 340 LRQCMENPVDLNQL* 354
>TAIR9_protein||AT1G31240.1 | Symbols: | DNA binding | chr1:11164065-11164898
REVERSE
Length = 278
Score = 69 bits (166), Expect = 7e-012
Identities = 58/181 (32%), Positives = 88/181 (48%), Gaps = 29/181 (16%)
Frame = -2
Query: 1185 DIKDPPSSSSYEFTHAAAKSAVAQICGSVGYSHFKDPPLESLTGFAIQYVLGLGKSATSF 1006
+ D +S+ EF+ + K AV+QIC S+GY L +LT +++ L + A+SF
Sbjct: 14 ETSDQSPTSTAEFSFSLTKIAVSQICQSIGYKATDASALNTLTLTTTKFLQSLAELASSF 73
Query: 1005 ANLNGRSQCNVFDIVLALEDLSGGGDD----EERVASLES-CL-RSVRLREIIEFVNSSG 844
+N R++ N+FDIV L+D++ D V +ES CL +S LR + +FV +
Sbjct: 74 SNTANRTEVNLFDIVNGLQDIALSTSDCFPGGSTVHDIESQCLIKSAVLRNLSDFVTYA- 132
Query: 843 DEEEEEEEEESPFLQTLPCFPVRRKMMMMKVPSF------VEVGETPPGKHIPLWLPAFP 682
E PF + LP RR+ + SF V V + +P WLP FP
Sbjct: 133 --------PEIPFAKPLP----RRE----RDGSFGGDLDHVAVTRSVDVTSVPAWLPPFP 176
Query: 681 D 679
D
Sbjct: 177 D 177
>TAIR9_protein||AT3G02160.1 | Symbols: | DNA binding | chr3:394615-395808
FORWARD
Length = 398
Score = 57 bits (135), Expect = 3e-008
Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Frame = -2
Query: 825 EEEESPFLQTLPCFPVRRKMMMMKVPSFVEVGETPPGKHIPLWLPAFPD 679
E EE PF+ +LP FP ++ PSF EVG PP +HIP+WLPAFP+
Sbjct: 156 EAEEIPFVYSLPRFPFSKE--KKPAPSFSEVGAEPPDEHIPVWLPAFPE 202
Score = 55 bits (132), Expect = 6e-008
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Frame = -2
Query: 1101 VGYSHFKDPPLESLTGFAIQYVLGLGKSATSFANLNGRSQCNVFDIVLALEDLSGGGDDE 922
V +S F++ L++LT A+QY+ +GK+A +ANL GR N DI+ ALEDL G G
Sbjct: 73 VRFSSFQESALDTLTDVAVQYIQSIGKTAHLYANLAGRVDGNSLDILQALEDL-GSGLGF 131
Query: 921 ERVASLESCLR-SVRLREIIEFVNSSGDEEE 832
V+ + CL S +++II + +G+ EE
Sbjct: 132 AGVSDTDHCLADSGVVKDIIRY---TGEAEE 159
>TAIR9_protein||AT5G15570.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Bromodomain transcription factor (InterPro:IPR006565); BEST Arabidopsis
thaliana protein match is: DNA binding (TAIR:AT3G02160.1); Has 143
Blast hits to 143 proteins in 37 species: Archae - 0; Bacteria - 0;
Metazoa - 85; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 8
(source: NCBI BLink). | chr5:5066851-5067996 FORWARD
Length = 382
Score = 57 bits (135), Expect = 3e-008
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Frame = -2
Query: 1095 YSHFKDPPLESLTGFAIQYVLGLGKSATSFANLNGRSQCNVFDIVLALEDLSGGGDDEER 916
+S F++ LE+LT IQY+ +GK+A + N+ GR + N DIV ALEDL G G +
Sbjct: 60 FSSFQETALETLTDVVIQYIQNIGKTAQFYVNMAGRVESNALDIVQALEDL-GSGLGFDG 118
Query: 915 VASLESCLR-SVRLREIIEFVNSSGDEEE 832
+E CL S +++II + +G+ EE
Sbjct: 119 AHDVEHCLADSGVVKDIIRY---TGEAEE 144
Score = 55 bits (131), Expect = 8e-008
Identities = 25/49 (51%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Frame = -2
Query: 825 EEEESPFLQTLPCFPVRRKMMMMKVPSFVEVGETPPGKHIPLWLPAFPD 679
E EE PF+ +LP FP R PSF ++G PP +HIP+WLPAFP+
Sbjct: 141 EAEEIPFVYSLPRFPFNRG--KRPAPSFSDIGVEPPDEHIPVWLPAFPE 187
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,572,546,445
Number of Sequences: 33410
Number of Extensions: 20572546445
Number of Successful Extensions: 658650332
Number of sequences better than 0.0: 0
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