BLASTX 7.6.2
Query= UN41558 /QuerySize=934
(933 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297852480|ref|XP_002894121.1| hypothetical protein ARALYDRAFT... 334 2e-089
gi|12321596|gb|AAG50847.1|AC074308_3 hypothetical protein, 3' pa... 184 3e-044
gi|8778700|gb|AAF79708.1|AC020889_16 T1N15.25 [Arabidopsis thali... 184 3e-044
gi|15221913|ref|NP_175295.1| high mobility group A5 [Arabidopsis... 184 3e-044
gi|297852586|ref|XP_002894174.1| predicted protein [Arabidopsis ... 164 3e-038
gi|42564980|ref|NP_188431.3| DNA-binding protein HMR1-like prote... 152 8e-035
gi|297834712|ref|XP_002885238.1| hypothetical protein ARALYDRAFT... 143 5e-032
gi|555655|gb|AAA50196.1| DNA-binding protein [Nicotiana tabacum] 127 3e-027
gi|255588084|ref|XP_002534496.1| histone h1/h5, putative [Ricinu... 121 2e-025
gi|224121202|ref|XP_002318524.1| high mobility group family [Pop... 120 4e-025
gi|225456128|ref|XP_002281814.1| PREDICTED: hypothetical protein... 119 6e-025
gi|4585621|emb|CAB40849.1| HMGI/Y protein [Zea mays] 116 5e-024
gi|4218141|emb|CAA15421.1| HMR1 protein [Antirrhinum majus] 114 3e-023
gi|162462851|ref|NP_001105938.1| HMGI/Y protein [Zea mays] 112 7e-023
gi|162463634|ref|NP_001105009.1| high mobility group I/Y-2 [Zea ... 109 8e-022
gi|15706274|emb|CAC69997.1| HMG I/Y like protein [Glycine max] 109 8e-022
gi|224133204|ref|XP_002321509.1| high mobility group family [Pop... 108 1e-021
>gi|297852480|ref|XP_002894121.1| hypothetical protein ARALYDRAFT_474000
[Arabidopsis lyrata subsp. lyrata]
Length = 473
Score = 334 bits (855), Expect = 2e-089
Identities = 201/323 (62%), Positives = 218/323 (67%), Gaps = 58/323 (17%)
Frame = +2
Query: 86 PP--SSLPAF---PNPFPVTQHPFYSNPVNSSPVAPPNNNNQF-FQPPQ-------PHPT 226
PP +S P F NPF HPF++ ++ VAPPNN + + PPQ PHP+
Sbjct: 14 PPQFTSFPPFTTNSNPFASQNHPFFT---GATAVAPPNNIHLYQAAPPQPQTSPVPPHPS 70
Query: 227 WVHPPYSEMICTAIAALNEAEGSSKQAISRYIERTYTGIPPAHKALLTHHLKSLKTSGVL 406
HPPYS+MICTAIAALNE +GSSKQAISRYIER YTGIP AH ALLTHHLK+LKTSG+L
Sbjct: 71 ISHPPYSDMICTAIAALNEPDGSSKQAISRYIERIYTGIPTAHGALLTHHLKTLKTSGIL 130
Query: 407 VMVKKSYKLALEPPP----------PPRSDNSVNEMQDL-------APTSTQKKRGRGRP 535
+MVKKSYKLA PPP PPRSD VNE Q L + T KRGRGRP
Sbjct: 131 MMVKKSYKLAATPPPTSVDAASGLEPPRSDFIVNENQPLPDPGLASSTTPQTLKRGRGRP 190
Query: 536 PKAKPD---DAVQTNGK------ELPVSRPEE-NIQPLPPPQPQLQPVVKRPPGRPRKDG 685
PK KPD +QTNGK ELPVSRPEE IQP P QP VKRPPGRPRKDG
Sbjct: 191 PKTKPDVVQPQLQTNGKPTWEQSELPVSRPEEIKIQPQP------QPTVKRPPGRPRKDG 244
Query: 686 TSSPTVK-AAPVSGGSEIAKRRGRPPSGRAAGRERKPAVVSAPVSLIPYVANGGVRRRGR 862
+SPTVK AA VSGG E KRRGRPPSGRA GRERKP VVSAP S+ PYVANGGVRRRGR
Sbjct: 245 -ASPTVKAAASVSGGVESVKRRGRPPSGRAVGRERKPIVVSAPASVFPYVANGGVRRRGR 303
Query: 863 PKRVDAGAL-------PPPPKAE 910
PKRVDAG PPPP AE
Sbjct: 304 PKRVDAGGASSVAPPPPPPPNAE 326
>gi|12321596|gb|AAG50847.1|AC074308_3 hypothetical protein, 3' partial
[Arabidopsis thaliana]
Length = 332
Score = 184 bits (465), Expect = 3e-044
Identities = 119/180 (66%), Positives = 124/180 (68%), Gaps = 23/180 (12%)
Frame = +2
Query: 434 ALEPPPPPRSDNSVNEMQD--LAPTSTQK-KRGRGRPPKAKPDDAVQ----TNGK----- 577
+LEPP N + D LA ++ Q KRGRGRPPKAKP D VQ TNGK
Sbjct: 156 SLEPPRSDFIVNENQPLPDPVLASSTPQTIKRGRGRPPKAKP-DVVQPQPLTNGKLTWEQ 214
Query: 578 -ELPVSRPEENIQPLPPPQP-QLQPVVKRPPGRPRKDGTSSPTVK-AAPVSGGSEIAKRR 748
ELPVSRPEE IQ PP P Q Q VKRPPGRPRKDGT SPTVK AA VSGG E KRR
Sbjct: 215 SELPVSRPEE-IQIQPPQLPLQPQQPVKRPPGRPRKDGT-SPTVKPAASVSGGVETVKRR 272
Query: 749 GRPPSGRAAGRERKPAVVSAPVSLIPYVANGGVRRRGRPKRVDAG-----ALPPPPKAEV 913
GRPPSGRAAGRERKP VVSAP S+ PYVANGGVRRRGRPKRVDAG A PPPP V
Sbjct: 273 GRPPSGRAAGRERKPIVVSAPASVFPYVANGGVRRRGRPKRVDAGGASSVAPPPPPPTNV 332
Score = 162 bits (409), Expect = 8e-038
Identities = 100/246 (40%), Positives = 127/246 (51%), Gaps = 14/246 (5%)
Frame = +2
Query: 113 NPFPVTQHPFYSNPVNSSP--------VAPPNNNNQFFQPPQPHPTWVHPPYSEMICTAI 268
NPF HPF++ P +P APP P PHP+ HPPYS+MICTAI
Sbjct: 29 NPFASPNHPFFTGPTAVAPPNNIHLYQAAPPQQPQT--SPVPPHPSISHPPYSDMICTAI 86
Query: 269 AALNEAEGSSKQAISRYIERTYTGIPPAHKALLTHHLKSLKTSGVLVMVKKSYKLALEPP 448
AALNE +GSSKQAISRYIER YTGIP AH ALLTHHLK+LKTSG+LVMVKKSYKLA PP
Sbjct: 87 AALNEPDGSSKQAISRYIERIYTGIPTAHGALLTHHLKTLKTSGILVMVKKSYKLASTPP 146
Query: 449 PPPRSDNSVNEMQDLAPTSTQKKRGRGRPPKAKPDDAVQTNGKELPVSRPEENIQPLPPP 628
PPP + + + + + + P A G+ P + +QP P
Sbjct: 147 PPPPTSVAPSLEPPRSDFIVNENQPLPDPVLASSTPQTIKRGRGRPPKAKPDVVQPQPLT 206
Query: 629 QPQLQ-PVVKRPPGRPRKDGTSSPTVKAAPVSGGSEIAKRRGRPPSGRAAGRERKPAVVS 805
+L + P RP + P + P+ + + GRP + + A VS
Sbjct: 207 NGKLTWEQSELPVSRPEEIQIQPPQL---PLQPQQPVKRPPGRPRKDGTSPTVKPAASVS 263
Query: 806 APVSLI 823
V +
Sbjct: 264 GGVETV 269
>gi|8778700|gb|AAF79708.1|AC020889_16 T1N15.25 [Arabidopsis thaliana]
Length = 594
Score = 184 bits (465), Expect = 3e-044
Identities = 119/180 (66%), Positives = 124/180 (68%), Gaps = 23/180 (12%)
Frame = +2
Query: 434 ALEPPPPPRSDNSVNEMQD--LAPTSTQK-KRGRGRPPKAKPDDAVQ----TNGK----- 577
+LEPP N + D LA ++ Q KRGRGRPPKAKP D VQ TNGK
Sbjct: 271 SLEPPRSDFIVNENQPLPDPVLASSTPQTIKRGRGRPPKAKP-DVVQPQPLTNGKLTWEQ 329
Query: 578 -ELPVSRPEENIQPLPPPQP-QLQPVVKRPPGRPRKDGTSSPTVK-AAPVSGGSEIAKRR 748
ELPVSRPEE IQ PP P Q Q VKRPPGRPRKDGT SPTVK AA VSGG E KRR
Sbjct: 330 SELPVSRPEE-IQIQPPQLPLQPQQPVKRPPGRPRKDGT-SPTVKPAASVSGGVETVKRR 387
Query: 749 GRPPSGRAAGRERKPAVVSAPVSLIPYVANGGVRRRGRPKRVDAG-----ALPPPPKAEV 913
GRPPSGRAAGRERKP VVSAP S+ PYVANGGVRRRGRPKRVDAG A PPPP V
Sbjct: 388 GRPPSGRAAGRERKPIVVSAPASVFPYVANGGVRRRGRPKRVDAGGASSVAPPPPPPTNV 447
Score = 163 bits (412), Expect = 4e-038
Identities = 104/261 (39%), Positives = 133/261 (50%), Gaps = 17/261 (6%)
Frame = +2
Query: 68 CTQRSSPPSSLPAFPNPFPVTQHPFYSNPVNSSP--------VAPPNNNNQFFQPPQPHP 223
C+ S PP + NPF HPF++ P +P APP P PHP
Sbjct: 132 CSFTSFPPFT---NTNPFASPNHPFFTGPTAVAPPNNIHLYQAAPPQQPQT--SPVPPHP 186
Query: 224 TWVHPPYSEMICTAIAALNEAEGSSKQAISRYIERTYTGIPPAHKALLTHHLKSLKTSGV 403
+ HPPYS+MICTAIAALNE +GSSKQAISRYIER YTGIP AH ALLTHHLK+LKTSG+
Sbjct: 187 SISHPPYSDMICTAIAALNEPDGSSKQAISRYIERIYTGIPTAHGALLTHHLKTLKTSGI 246
Query: 404 LVMVKKSYKLALEPPPPPRSDNSVNEMQDLAPTSTQKKRGRGRPPKAKPDDAVQTNGKEL 583
LVMVKKSYKLA PPPPP + + + + + + P A G+
Sbjct: 247 LVMVKKSYKLASTPPPPPPTSVAPSLEPPRSDFIVNENQPLPDPVLASSTPQTIKRGRGR 306
Query: 584 PVSRPEENIQPLPPPQPQLQ-PVVKRPPGRPRKDGTSSPTVKAAPVSGGSEIAKRRGRPP 760
P + +QP P +L + P RP + P + P+ + + GRP
Sbjct: 307 PPKAKPDVVQPQPLTNGKLTWEQSELPVSRPEEIQIQPPQL---PLQPQQPVKRPPGRPR 363
Query: 761 SGRAAGRERKPAVVSAPVSLI 823
+ + A VS V +
Sbjct: 364 KDGTSPTVKPAASVSGGVETV 384
>gi|15221913|ref|NP_175295.1| high mobility group A5 [Arabidopsis thaliana]
Length = 479
Score = 184 bits (465), Expect = 3e-044
Identities = 119/180 (66%), Positives = 124/180 (68%), Gaps = 23/180 (12%)
Frame = +2
Query: 434 ALEPPPPPRSDNSVNEMQD--LAPTSTQK-KRGRGRPPKAKPDDAVQ----TNGK----- 577
+LEPP N + D LA ++ Q KRGRGRPPKAKP D VQ TNGK
Sbjct: 156 SLEPPRSDFIVNENQPLPDPVLASSTPQTIKRGRGRPPKAKP-DVVQPQPLTNGKLTWEQ 214
Query: 578 -ELPVSRPEENIQPLPPPQP-QLQPVVKRPPGRPRKDGTSSPTVK-AAPVSGGSEIAKRR 748
ELPVSRPEE IQ PP P Q Q VKRPPGRPRKDGT SPTVK AA VSGG E KRR
Sbjct: 215 SELPVSRPEE-IQIQPPQLPLQPQQPVKRPPGRPRKDGT-SPTVKPAASVSGGVETVKRR 272
Query: 749 GRPPSGRAAGRERKPAVVSAPVSLIPYVANGGVRRRGRPKRVDAG-----ALPPPPKAEV 913
GRPPSGRAAGRERKP VVSAP S+ PYVANGGVRRRGRPKRVDAG A PPPP V
Sbjct: 273 GRPPSGRAAGRERKPIVVSAPASVFPYVANGGVRRRGRPKRVDAGGASSVAPPPPPPTNV 332
Score = 162 bits (409), Expect = 8e-038
Identities = 100/246 (40%), Positives = 127/246 (51%), Gaps = 14/246 (5%)
Frame = +2
Query: 113 NPFPVTQHPFYSNPVNSSP--------VAPPNNNNQFFQPPQPHPTWVHPPYSEMICTAI 268
NPF HPF++ P +P APP P PHP+ HPPYS+MICTAI
Sbjct: 29 NPFASPNHPFFTGPTAVAPPNNIHLYQAAPPQQPQT--SPVPPHPSISHPPYSDMICTAI 86
Query: 269 AALNEAEGSSKQAISRYIERTYTGIPPAHKALLTHHLKSLKTSGVLVMVKKSYKLALEPP 448
AALNE +GSSKQAISRYIER YTGIP AH ALLTHHLK+LKTSG+LVMVKKSYKLA PP
Sbjct: 87 AALNEPDGSSKQAISRYIERIYTGIPTAHGALLTHHLKTLKTSGILVMVKKSYKLASTPP 146
Query: 449 PPPRSDNSVNEMQDLAPTSTQKKRGRGRPPKAKPDDAVQTNGKELPVSRPEENIQPLPPP 628
PPP + + + + + + P A G+ P + +QP P
Sbjct: 147 PPPPTSVAPSLEPPRSDFIVNENQPLPDPVLASSTPQTIKRGRGRPPKAKPDVVQPQPLT 206
Query: 629 QPQLQ-PVVKRPPGRPRKDGTSSPTVKAAPVSGGSEIAKRRGRPPSGRAAGRERKPAVVS 805
+L + P RP + P + P+ + + GRP + + A VS
Sbjct: 207 NGKLTWEQSELPVSRPEEIQIQPPQL---PLQPQQPVKRPPGRPRKDGTSPTVKPAASVS 263
Query: 806 APVSLI 823
V +
Sbjct: 264 GGVETV 269
>gi|297852586|ref|XP_002894174.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 164 bits (413), Expect = 3e-038
Identities = 92/140 (65%), Positives = 100/140 (71%), Gaps = 14/140 (10%)
Frame = +2
Query: 536 PKAKPDDAVQTNGK------ELPVSRPEENIQPLPPPQPQLQPVVKRPPGRPRKDGTSSP 697
PK + QTNGK ELPVS+P++ I P P Q Q P +KRPPGRPRKDG + P
Sbjct: 47 PKPEVQPQPQTNGKPTWEQSELPVSQPQDEIHPQPQAQIQ-PPPIKRPPGRPRKDG-ALP 104
Query: 698 TVK-AAPVSGGSEIAKRRGRPPSGRAAGRERKPAVVSAPVSLIPYVANGGVRRRGRPKRV 874
TVK AA VSGG EI KRRGRPPSGRAAGRERKP V+SAP S+ PYVANGGVRRRGRPKRV
Sbjct: 105 TVKTAASVSGGVEIVKRRGRPPSGRAAGRERKPTVISAPASVFPYVANGGVRRRGRPKRV 164
Query: 875 DAGAL-----PPPPKAEVGG 919
DAGA P PP E GG
Sbjct: 165 DAGASSVAPPPQPPNVESGG 184
>gi|42564980|ref|NP_188431.3| DNA-binding protein HMR1-like protein [Arabidopsis
thaliana]
Length = 480
Score = 152 bits (383), Expect = 8e-035
Identities = 118/295 (40%), Positives = 146/295 (49%), Gaps = 44/295 (14%)
Frame = +2
Query: 86 PPSSLPAFPNPFPVT-QHPFYSNPVNSSPVAPPNNNNQFFQP-PQ-----PHPTWVHPPY 244
PP P FP+ FP + HP NP N+ V P Q P PQ PH + HPPY
Sbjct: 11 PPQFTP-FPH-FPTSNHHPLGPNPYNNHVVFQPQPQTQTQIPQPQMFQLSPHVSMPHPPY 68
Query: 245 SEMICTAIAALNEAEGSSKQAISRYIERTYTGIPPAHKALLTHHLKSLKTSGVLVMVKKS 424
SEMIC AIAALNE +GSSK AISRYIER YTG+ AH ALLTHHLK+LKTSGVL MVKKS
Sbjct: 69 SEMICAAIAALNEPDGSSKMAISRYIERCYTGLTSAHAALLTHHLKTLKTSGVLSMVKKS 128
Query: 425 YKLALEPPPPPRSDNSVNEMQDLAPTSTQKKRGRGRPPK----AKPDDAVQTNGKELPVS 592
YK+A PP +A + +G P + +D + + P+
Sbjct: 129 YKIAGSSTPP----------ASVAVAAAAAAQGLDVPRSEILHSSNNDPMASGSASQPLK 178
Query: 593 RPEENIQPLPPPQPQLQPVVKRPP-------GRP--RKDGTSSPTVKAAPVSGGSEIAKR 745
R P P P+ Q QP+ + PP G+P + SP PV +E AKR
Sbjct: 179 RGRGR-PPKPKPESQPQPLQQLPPTNQVQANGQPIWEQQQVQSPVPVPTPV---TESAKR 234
Query: 746 -RGRPPSGRAAGRERKPAVVSAPVSLIPYVANGGVRRRGRPKRVDAGALPPPPKA 907
GRP +A P V ++ V G ++RRGRP A PK+
Sbjct: 235 GPGRPRKNGSAAPATAPIVQAS-------VMAGIMKRRGRPPGRRAAGRQRKPKS 282
>gi|297834712|ref|XP_002885238.1| hypothetical protein ARALYDRAFT_479291
[Arabidopsis lyrata subsp. lyrata]
Length = 480
Score = 143 bits (359), Expect = 5e-032
Identities = 113/299 (37%), Positives = 138/299 (46%), Gaps = 49/299 (16%)
Frame = +2
Query: 86 PPSSLPAFPNPFPVTQHPFYSNPVNSSPVAPPNNNNQFFQP-PQ---PHPTWV------- 232
PP P FP PFP + H F S V + P NNNN FQP PQ P P+ +
Sbjct: 11 PPQFTP-FP-PFPTSNH-FVSGAVPALNHHPFNNNNHVFQPQPQTQIPQPSMIQVPPHPI 67
Query: 233 -HPPYSEMICTAIAALNEAEGSSKQAISRYIERTYTGIPPAHKALLTHHLKSLKTSGVLV 409
HPPYSEMIC AIAALNE +GSSK AISRYIER + G+ AH ALLTHHLK+LK SGVL
Sbjct: 68 NHPPYSEMICAAIAALNEPDGSSKMAISRYIERCHPGLTSAHAALLTHHLKTLKNSGVLT 127
Query: 410 MVKKSYKLALEPPPPPRSDNSVNEMQDLAPTSTQKKRGRGRPPKAKPDDAVQTNGKELPV 589
MVKKSYK+A PP +A + +G P T + V
Sbjct: 128 MVKKSYKIASSSTPP----------ASVAVAAAAAAQGLDVPRSVILPSTNSTVNDPMAV 177
Query: 590 SRPE-----ENIQPLPPPQPQLQPVVKRPPGRPRKDG--------TSSPTVKAAPVSGGS 730
S + P P P+ Q Q + P + + +G P PV +
Sbjct: 178 SASQPLKRGRGRPPKPKPEGQQQQPINAQPIQVQSNGQPIWQLQQVQLPVTVPVPV---T 234
Query: 731 EIAKRRGRPPSGRAAGRERKPAVVSAPVSLIPYVANGGVRRRGRPKRVDAGALPPPPKA 907
E AK R GR RK + + V G ++RRGRP A PK+
Sbjct: 235 ESAK--------RGPGRPRKNGAAAVAPIVQASVMAGIMKRRGRPPGRRAAGRQRKPKS 285
>gi|555655|gb|AAA50196.1| DNA-binding protein [Nicotiana tabacum]
Length = 546
Score = 127 bits (318), Expect = 3e-027
Identities = 73/149 (48%), Positives = 91/149 (61%), Gaps = 15/149 (10%)
Frame = +2
Query: 128 TQHPFYSNP--VNSSPVAPPNNNNQFFQPPQPHPTW--VHPPYSEMICTAIAALNEAEGS 295
T+ P +++ VN +P P QPP P P++ HPPY+EMI AI AL E +GS
Sbjct: 11 TESPTFNSAQVVNHAPTPTPP------QPPPPAPSFSPTHPPYAEMITAAITALKERDGS 64
Query: 296 SKQAISRYIERTYTGIPPAHKALLTHHLKSLKTSGVLVMVKKSYKLALEP---PPPPRSD 466
S+ AI++YI+R YT +PP H ALLTHHLK LK SG L MVK SY LA P PPPP +D
Sbjct: 65 SRIAIAKYIDRVYTNLPPNHSALLTHHLKRLKNSGYLAMVKHSYMLAGPPGSAPPPPSAD 124
Query: 467 NSVNEMQDLAPTSTQKKRGRGRPPKAKPD 553
N + S+ KR GRPPK KP+
Sbjct: 125 ADSNGVG--TDVSSLSKRKPGRPPKLKPE 151
>gi|255588084|ref|XP_002534496.1| histone h1/h5, putative [Ricinus communis]
Length = 435
Score = 121 bits (303), Expect = 2e-025
Identities = 78/178 (43%), Positives = 102/178 (57%), Gaps = 29/178 (16%)
Frame = +2
Query: 86 PPSSLPAFPNPFPV-TQHPFYSNPVNSSPVAPPNN--NNQFFQPPQPHPTWVHPPYSEMI 256
PP+++ A P TQ S PV + A N+ + P ++ HPPY++MI
Sbjct: 17 PPATITAAAVPSAASTQIIPPSPPVTAEAAAAHNHVAHAANATAPTVAQSFNHPPYTDMI 76
Query: 257 CTAIAALNEAEGSSKQAISRYIERTYTGIPPAHKALLTHHLKSLKTSGVLVMVKKSYKLA 436
AI AL E +GSSK+AI++YIER Y G+PP H ALLTHHLK LK +G+LVMVKKSYKL
Sbjct: 77 YAAITALKERDGSSKRAIAKYIERVYPGLPPTHSALLTHHLKRLKNTGLLVMVKKSYKL- 135
Query: 437 LEPPPPPRSD-------------NSVNEM------QDLAPTSTQKKRGRGRPPKAKPD 553
PRSD N++N + + A T++ KRGRGRPPK KP+
Sbjct: 136 ------PRSDDTVATNNINSSTSNNINAVGHSALPPNPAVTNSGPKRGRGRPPKPKPE 187
>gi|224121202|ref|XP_002318524.1| high mobility group family [Populus
trichocarpa]
Length = 369
Score = 120 bits (300), Expect = 4e-025
Identities = 75/191 (39%), Positives = 100/191 (52%), Gaps = 40/191 (20%)
Frame = +2
Query: 101 PAFPNPFPVTQHPFYSNPVNSSPVAPPNNNNQFFQPPQPHPTWVHPPYSEMICTAIAALN 280
P+ P P P T+ P + + +P PP P PT HP Y+EMI +AI AL
Sbjct: 16 PSIPPPPPTTETPTTTETPHLAP------------PPNPTPTITHPSYAEMIYSAITALK 63
Query: 281 EAEGSSKQAISRYIERTYTGIPPAHKALLTHHLKSLKTSGVLVMVKKSYKLALEPPPPPR 460
E +GSS+ AI++YIER Y G+ P+H LLTHHLK LK SG LV+ KKSY L PR
Sbjct: 64 EQDGSSRIAIAKYIERAYPGLSPSHSDLLTHHLKRLKNSGALVLNKKSYLL-------PR 116
Query: 461 SDNSVN------------------EMQDLAPTST---QKKRGRGRPPKAKPDDAVQTNGK 577
SD + + + Q +AP S+ ++KRGRGRPPK K + T
Sbjct: 117 SDINTDISATITTTATVSTNPPQIQPQYVAPISSAPPEQKRGRGRPPKTKANGLPPTPAS 176
Query: 578 ELPVSRPEENI 610
L +P+ +
Sbjct: 177 VLANGQPQTGL 187
>gi|225456128|ref|XP_002281814.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 355
Score = 119 bits (298), Expect = 6e-025
Identities = 80/199 (40%), Positives = 101/199 (50%), Gaps = 20/199 (10%)
Frame = +2
Query: 122 PVTQHPFYSNPVNSSPVAPPNNNNQFFQPPQPH-PTWVHPPYSEMICTAIAALNEAEGSS 298
P P P P A + P H P HPPY+EMI TAI ALNE GSS
Sbjct: 3 PAPPPPLPPPPPPQPPAASEAHVAHAANPTPSHGPPHNHPPYAEMITTAIGALNERTGSS 62
Query: 299 KQAISRYIERTYTGIPPAHKALLTHHLKSLKTSGVLVMVKKSYKLALEPPPPPRSDNSVN 478
K+AI++YIERT+ +PP+H ALLTHHLK L++SG +VMVK SY L PRS + +
Sbjct: 63 KKAIAKYIERTFGDLPPSHPALLTHHLKRLRSSGQVVMVKHSYML-------PRSGDDAH 115
Query: 479 EMQDLAPTSTQKKRGRGRPPKAKPDDAVQTNGKELPVSRPEENIQP-----LPP------ 625
+ + KRGRGRPPK K + + V + + P PP
Sbjct: 116 ALPLHPGPVSGPKRGRGRPPKPKIPVQPTSESVLVAVGLVDGPVVPKRGPGRPPKSGGVR 175
Query: 626 -PQPQLQPVVKRPPGRPRK 679
P+P+ KR PGRP K
Sbjct: 176 GPRPKSLDGPKRRPGRPPK 194
>gi|4585621|emb|CAB40849.1| HMGI/Y protein [Zea mays]
Length = 190
Score = 116 bits (290), Expect = 5e-024
Identities = 79/186 (42%), Positives = 100/186 (53%), Gaps = 26/186 (13%)
Frame = +2
Query: 236 PPYSEMICTAIAALNEAEGSSKQAISRYIERTYTGIPPAHKALLTHHLKSLKTSGVLVMV 415
PPY EMI AI L+E GS+K AIS+YIE Y +PPAH++LLT HL ++K SG LV +
Sbjct: 13 PPYPEMILAAIEGLDEKSGSNKSAISKYIEGKYGSLPPAHESLLTAHLAAMKESGELVFL 72
Query: 416 KKSYKLALEPP--PPPRSDNSVNEMQD-LAPTSTQK---KRGRGRPPKAK-PDDAVQTNG 574
K +Y A PP PP R + +D AP K RG GRPPKAK P +A
Sbjct: 73 KNNYFRADAPPNAPPKRGRGRPPKARDPNAPAPAPKSPSSRGAGRPPKAKSPLEA----- 127
Query: 575 KELPVSRPEENIQPLPPPQPQLQPVVKRPPGRPRKDGTSSPTVKAAPVSGGSEIAKR-RG 751
R E + +P P+ RPP + + +G +SP+ AP GS KR RG
Sbjct: 128 ------RREAGHRGMPKPR-------GRPPKKAKTEGAASPSPSPAPAGDGSTPGKRGRG 174
Query: 752 RPPSGR 769
RPP R
Sbjct: 175 RPPKVR 180
>gi|4218141|emb|CAA15421.1| HMR1 protein [Antirrhinum majus]
Length = 400
Score = 114 bits (284), Expect = 3e-023
Identities = 105/303 (34%), Positives = 137/303 (45%), Gaps = 62/303 (20%)
Frame = +2
Query: 89 PSSLPAFPNPFPVTQHPFYSNPVNSSPVAPPNNNNQFFQPPQPHPTWVHPPYSEMICTAI 268
P + P P P P T + +PVA P P+ P HPPY+EMI +AI
Sbjct: 15 PQAAPPVPVPVPTTT----AEAPIPNPVANPT--------PKRAPAHNHPPYAEMITSAI 62
Query: 269 AALNEAEGSSKQAISRYIERTYTGIPPAHKALLTHHLKSLKTSGVLVMVKKSYKLALEPP 448
+ALNE GSSK+AI++Y+E +TG+P H +LL HLK LK +G ++MVK SYKL P
Sbjct: 63 SALNERNGSSKRAIAKYVESNFTGLPATHASLLATHLKRLKDTGDILMVKHSYKLPRSAP 122
Query: 449 PPPRSDNSVNEMQDLAPTSTQKKRGRGRPPKAKPDD---AVQTNGKELPV-SRPEENIQ- 613
S+ +V+ A ST KR GRP K P + AV ++ + + PE ++
Sbjct: 123 ----SNGAVS-----ADPST--KRRPGRPRKDNPQNLQAAVPVFAPQVDINAAPEIAVEQ 171
Query: 614 ------------PLPP---PQPQLQPVVKRPPGRPRKDGTSSPTVKAAPVSG--GSEIAK 742
P PP +P Q R GRP K + P AA V G + +A
Sbjct: 172 GSVYVELGPINGPSPPRGRGRPPKQGGRGRGRGRPPKTAVAPPAAAAAAVPGAPAAAVAP 231
Query: 743 RRGRPPSGRAAGRERKPAVVSAPVSLIPYVANGGVRRRGRPKRVDAGALPPPPKAEVGGG 922
GR GR KP I V G V P V AG + P V GG
Sbjct: 232 AAQVKGPGRPRGRPPKP---------INVVEGGAV---AAPVAVPAGGVLP-----VAGG 274
Query: 923 SQV 931
S V
Sbjct: 275 SVV 277
>gi|162462851|ref|NP_001105938.1| HMGI/Y protein [Zea mays]
Length = 191
Score = 112 bits (280), Expect = 7e-023
Identities = 74/190 (38%), Positives = 96/190 (50%), Gaps = 29/190 (15%)
Frame = +2
Query: 236 PPYSEMICTAIAALNEAEGSSKQAISRYIERTYTGIPPAHKALLTHHLKSLKTSGVLVMV 415
PPY EMI AI L++ GS+K AIS+YIE Y +PPAH +LLT HL +K SG LV +
Sbjct: 13 PPYPEMILAAIEGLDDKSGSNKSAISKYIEGKYGSLPPAHASLLTAHLARMKESGELVFL 72
Query: 416 KKSYKLALEPPPPPR---------SDNSVNEMQDLAPTSTQKKRGRGRPPKAKPDDAVQT 568
K +Y A P PP+ D + +P+ST RGRGRPPKAK ++
Sbjct: 73 KNNYFRAGAPDAPPKRGRGRPPKARDPNAPAPAPKSPSST--GRGRGRPPKAK--SPLEA 128
Query: 569 NGKELPVSRPEENIQPLPPPQPQLQPVVKRPPGRPRKDGTSSPTVKAAPVSGGSEIAKR- 745
K+ P+ RPP + + +G +SP+ AP GS KR
Sbjct: 129 AVKQATAGMPKPR---------------GRPPKKAKTEGAASPSPSPAPAGDGSTPGKRG 173
Query: 746 RGRPPSGRAA 775
RGRPP R A
Sbjct: 174 RGRPPKVRPA 183
>gi|162463634|ref|NP_001105009.1| high mobility group I/Y-2 [Zea mays]
Length = 193
Score = 109 bits (271), Expect = 8e-022
Identities = 75/192 (39%), Positives = 96/192 (50%), Gaps = 31/192 (16%)
Frame = +2
Query: 236 PPYSEMICTAIAALNEAEGSSKQAISRYIERTYTGIPPAHKALLTHHLKSLKTSGVLVMV 415
PPY EMI AI L++ GS+K AIS+YIE Y +PPAH +LLT HL +K SG LV +
Sbjct: 13 PPYPEMILAAIEGLDDKSGSNKSAISKYIEGKYGSLPPAHASLLTAHLARMKESGELVFL 72
Query: 416 KKSYKLALEPPPPPR---------SDNSVNEMQDLAPTSTQKKRGRGRPPKAKPDDAVQT 568
K +Y A P PP+ D + +P+ST RGRGRPPKAK ++
Sbjct: 73 KNNYFRAGAPDAPPKRGRGRPPKARDPNAPAPAPKSPSST--GRGRGRPPKAK--SPLEA 128
Query: 569 NGKELPVSRPEENIQPLPPPQPQLQPVVKRPPGRPRKDGTSSPTVK--AAPVSGGSEIAK 742
K+ P+ RPP + + DG +SP+ AP GS K
Sbjct: 129 AVKQATAGMPKPR---------------GRPPKKAKTDGAASPSPSPAPAPAGDGSTPGK 173
Query: 743 R-RGRPPSGRAA 775
R RGRPP R A
Sbjct: 174 RGRGRPPKVRPA 185
>gi|15706274|emb|CAC69997.1| HMG I/Y like protein [Glycine max]
Length = 413
Score = 109 bits (271), Expect = 8e-022
Identities = 76/212 (35%), Positives = 104/212 (49%), Gaps = 19/212 (8%)
Frame = +2
Query: 176 PPNNNNQFFQPPQPHPTWV------HPPYSEMICTAIAALNEAEGSSKQAISRYIERTYT 337
PP F P H T HPPY EMI TAI AL E +GSSK+AI +Y+E+ Y
Sbjct: 9 PPATTVPFTVEPSNHVTPADNTNTNHPPYDEMIYTAIGALKEKDGSSKRAIGKYMEQVYK 68
Query: 338 GIPPAHKALLTHHLKSLKTSGVLVMVKKSYKL-ALEPPPPPRSDNSVNEMQDLAPTSTQK 514
+PP H ALLTHHL LK++G+L++VKKSYKL +P P ++ L +Q
Sbjct: 69 DLPPTHSALLTHHLNRLKSAGLLILVKKSYKLPGSDPLPVLQAQKPRGRPPKL---KSQP 125
Query: 515 KRGRGRPPKAKPDDAVQTNGKELPVSRPEENIQPL-PPPQPQLQPVVKRPPGR-----PR 676
P A D+ + K P RP++ P+ P P + RPPG P+
Sbjct: 126 NTELTWPALALNDNPALQSAKRGP-GRPKKIAGPVGVSPGPMVPGRRGRPPGTGRSKLPK 184
Query: 677 KDGTSSPTVKAAPVSGGSEIAKRRGRPPSGRA 772
+ G + +S G + +R GRPP +
Sbjct: 185 RPGRPPKPKSVSAISSG--LKRRPGRPPKAES 214
>gi|224133204|ref|XP_002321509.1| high mobility group family [Populus
trichocarpa]
Length = 478
Score = 108 bits (269), Expect = 1e-021
Identities = 63/131 (48%), Positives = 77/131 (58%), Gaps = 25/131 (19%)
Frame = +2
Query: 209 PQPHPTWVHPPYSEMICTAIAALNEAEGSSKQAISRYIERTYTGIPPAHKALLTHHLKSL 388
P P P P Y+EMI +AI AL E +GSS+ AI++YIER Y G+P H LLTHHLK L
Sbjct: 40 PNPAPAVTQPSYAEMIYSAITALKEQDGSSRIAIAKYIERAYPGLPSNHSDLLTHHLKRL 99
Query: 389 KTSGVLVMVKKSYKLALEPPPPPRSDNSVN---------------EMQDLAPTST---QK 514
K SG LV+ KKSY L PRSD++ N + Q P S+ ++
Sbjct: 100 KNSGALVLNKKSYML-------PRSDSNANITTTTPTVSTSPTQIQPQYAVPVSSAPPEQ 152
Query: 515 KRGRGRPPKAK 547
KRGRGRPPKAK
Sbjct: 153 KRGRGRPPKAK 163
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,587,916,767,856
Number of Sequences: 15229318
Number of Extensions: 4587916767856
Number of Successful Extensions: 1071853064
Number of sequences better than 0.0: 0
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