BLASTX 7.6.2
Query= UN41558 /QuerySize=934
(933 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P27806|H1_WHEAT Histone H1 OS=Triticum aestivum PE=2 SV=2 77 1e-013
sp|P37218|H1_SOLLC Histone H1 OS=Solanum lycopersicum PE=3 SV=1 70 2e-011
sp|Q10370|HMGYB_SOYBN HMG-Y-related protein B (Fragment) OS=Glyc... 67 2e-010
sp|Q00423|HMGYA_SOYBN HMG-Y-related protein A OS=Glycine max PE=... 63 3e-009
sp|P54671|H1_DICDI Histone H1 OS=Dictyostelium discoideum GN=H1 ... 61 9e-009
sp|P40267|H1_SOLPN Histone H1 OS=Solanum pennellii PE=2 SV=1 56 4e-007
sp|P23246|SFPQ_HUMAN Splicing factor, proline- and glutamine-ric... 53 3e-006
>sp|P27806|H1_WHEAT Histone H1 OS=Triticum aestivum PE=2 SV=2
Length = 238
Score = 77 bits (189), Expect = 1e-013
Identities = 56/185 (30%), Positives = 83/185 (44%), Gaps = 6/185 (3%)
Frame = +2
Query: 206 PPQPHPTWVHPPYSEMICTAIAALNEAEGSSKQAISRYIERTYTGIPPAH-KALLTHHLK 382
P +P T HP Y+EM+ AIAAL E GSS AI ++IE + PA+ + +L +K
Sbjct: 46 PKKPRVTPAHPSYAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIK 105
Query: 383 SLKTSGVLVMVKKSYKLALEPP--PPPRSDNSVNEMQDLAPTSTQKKRGRGRPPKAKPDD 556
L +G L VK SYKLA P P + + A +K + KA
Sbjct: 106 KLVAAGKLTKVKGSYKLAKAPAAVKPKTATKKKPAAKPKAKAPAKKTAAKSPAKKAAAKP 165
Query: 557 AVQTNGKELPVSRPEENIQPLPPPQPQLQPVVKRPP--GRPRKDGT-SSPTVKAAPVSGG 727
+ K V++P+ +P +P+ + K+ P P+K PT +A PV
Sbjct: 166 KAKAPAKAKAVAKPKAAAKPKAAAKPKAKAAAKKAPAAATPKKPAARKPPTKRATPVKKA 225
Query: 728 SEIAK 742
+ K
Sbjct: 226 APAKK 230
>sp|P37218|H1_SOLLC Histone H1 OS=Solanum lycopersicum PE=3 SV=1
Length = 287
Score = 70 bits (169), Expect = 2e-011
Identities = 53/174 (30%), Positives = 72/174 (41%), Gaps = 8/174 (4%)
Frame = +2
Query: 206 PPQPHPTWVHPPYSEMICTAIAALNEAEGSSKQAISRYIERTYTGIPPAHKALLTHHLKS 385
P + T HPPY EMI AI L E GSS+ AI+++IE +P K LL LK
Sbjct: 47 PRKRSATPTHPPYFEMIKDAIVTLKERTGSSQHAITKFIEEKQKSLPSNFKKLLLTQLKK 106
Query: 386 LKTSGVLVMVKKSYKLALEPPPPPRSDNSVNEMQDLAPTSTQKKRGRGRPPKAKPDDAVQ 565
S LV VK SYKL P + + A + K PKAKP +
Sbjct: 107 FVASEKLVKVKNSYKLP-SGSKPAAAAVPAKKKPAAAKSKPAAKPKAAVKPKAKPAAKAK 165
Query: 566 TNGKELPVSRPEENIQPLP----PPQPQLQPVVKRPPGRPRKDGTSSPTVKAAP 715
K P ++ + + P P + +PV K +P+ + P P
Sbjct: 166 PAAKAKPAAKAKPAAKAKPAAKAKPAAKAKPVAK---AKPKAAAAAKPKAAVKP 216
>sp|Q10370|HMGYB_SOYBN HMG-Y-related protein B (Fragment) OS=Glycine max PE=2
SV=1
Length = 152
Score = 67 bits (162), Expect = 2e-010
Identities = 52/143 (36%), Positives = 66/143 (46%), Gaps = 10/143 (6%)
Frame = +2
Query: 272 ALNEAEGSSKQAISRYIERTYTGIPPAHKALLTHHLKSLKTSGVLVMVKKSYKLALEPPP 451
ALNEA+GS+K AIS+YIE TY +P + +L HL +K SG L + +Y A P
Sbjct: 1 ALNEADGSNKSAISKYIETTYGELP--DETVLGSHLNKMKESGELAFKQNNYMKADPNAP 58
Query: 452 PPRSDNSVNEMQDLAPTST--QKKRGRGRPPK-----AKPDDAVQTNGKELPVSRPEENI 610
P R + + P T R RGRPPK K A T P RP++
Sbjct: 59 PKRGRGRPPKPKVPLPPGTVVSPPRPRGRPPKDPNAPPKSPKAKATPATGRPRGRPKKVA 118
Query: 611 QPLPPPQPQLQPVVKRPPGRPRK 679
+ P P RP GRP K
Sbjct: 119 RSPAVPSPTAVS-TGRPRGRPPK 140
>sp|Q00423|HMGYA_SOYBN HMG-Y-related protein A OS=Glycine max PE=2 SV=1
Length = 176
Score = 63 bits (151), Expect = 3e-009
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Frame = +2
Query: 236 PPYSEMICTAIAALNEAEGSSKQAISRYIERTYTGIPPAHKALLTHHLKSLKTSGVLVMV 415
PPY EMI + ALNE GS+K AIS+YIE TY +P A +L HL +K SG L
Sbjct: 13 PPYPEMIVKTLEALNEPNGSNKSAISKYIETTYGELPDA--TVLGSHLNKMKDSGELSFK 70
Query: 416 KKSYKLALEPPPPPR 460
+ +Y A +P PP+
Sbjct: 71 QNNYMKA-DPNAPPK 84
>sp|P54671|H1_DICDI Histone H1 OS=Dictyostelium discoideum GN=H1 PE=1 SV=3
Length = 180
Score = 61 bits (147), Expect = 9e-009
Identities = 38/93 (40%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = +2
Query: 164 SPVAPPNNNNQFFQPPQPHPTWVHPPYSEMICTAIAALNEAEGSSKQAISRYIERTYTGI 343
+P P P+P+ HP Y MI TAIA + GSS+ AI +YIE Y
Sbjct: 5 APTTPTKKAAATKSKPKPN----HPTYQVMISTAIAHYKDRTGSSQPAIIKYIEANYNVA 60
Query: 344 PPAHKALLTHHLKSLKTSGVLVMVKKSYKLALE 442
P K L LK L G L MVK SYKL+ E
Sbjct: 61 PDTFKTQLKLALKRLVAKGTLTMVKASYKLSEE 93
>sp|P40267|H1_SOLPN Histone H1 OS=Solanum pennellii PE=2 SV=1
Length = 202
Score = 56 bits (133), Expect = 4e-007
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 5/133 (3%)
Frame = +2
Query: 209 PQPHPTWVHPPYSEMICTAIAALNEAEGSSKQAISRYIERTYTGIPPAH-KALLTHHLKS 385
P+ HPPY +MI A+ ALNE GSS A+++Y+E + PA+ + +L LK+
Sbjct: 41 PKSAKAVTHPPYFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKN 100
Query: 386 LKTSGVLVMVKKSYKLALEPPPPPRSDNSVNEMQDLAPTSTQKKRGRGRPPKAKPDDAVQ 565
G L+ +K SYKL+ + S ++ P + KK+ R A +
Sbjct: 101 SAAKGKLIKIKASYKLSEAGKKETTTKTSTKKL----PKADSKKKPRSTRATATAAKKTE 156
Query: 566 TNGKELPVSRPEE 604
K +P++
Sbjct: 157 VPKKAKATPKPKK 169
>sp|P23246|SFPQ_HUMAN Splicing factor, proline- and glutamine-rich OS=Homo
sapiens GN=SFPQ PE=1 SV=2
Length = 707
Score = 53 bits (125), Expect = 3e-006
Identities = 42/132 (31%), Positives = 54/132 (40%), Gaps = 8/132 (6%)
Frame = +2
Query: 530 RPPKAKPDDAVQTNGKELPVSRPEENIQPLPPPQPQLQPVVKRPPGRPRKDGTSSPTVKA 709
+PP +P + P +P + QP PPPQ +PVV + PG G++ P +
Sbjct: 71 QPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSS 130
Query: 710 APVSGGSEIAKRRGRPP-SGRAAGRERKPAVVSAPVSLIPYVANGGVRRRGRPKRVDAGA 886
AP + G PP SG PAV SAP P P+ AG
Sbjct: 131 APPA----TPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQ---AGG 183
Query: 887 LPPPPKAEVGGG 922
PPPP A G G
Sbjct: 184 PPPPPAAVPGPG 195
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 159,249,259,203
Number of Sequences: 518415
Number of Extensions: 159249259203
Number of Successful Extensions: 968868021
Number of sequences better than 0.0: 0
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