BLASTX 7.6.2
Query= UN41621 /QuerySize=771
(770 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G19730.1 | Symbols: | 60S ribosomal protein L... 253 1e-067
TAIR9_protein||AT2G19730.2 | Symbols: | 60S ribosomal protein L... 253 1e-067
TAIR9_protein||AT2G19730.3 | Symbols: | 60S ribosomal protein L... 253 1e-067
TAIR9_protein||AT4G29410.1 | Symbols: | 60S ribosomal protein L... 248 4e-066
TAIR9_protein||AT4G29410.2 | Symbols: | 60S ribosomal protein L... 248 4e-066
>TAIR9_protein||AT2G19730.1 | Symbols: | 60S ribosomal protein L28 (RPL28A) |
chr2:8511752-8512995 FORWARD
Length = 144
Score = 253 bits (645), Expect = 1e-067
Identities = 126/144 (87%), Positives = 134/144 (93%)
Frame = +2
Query: 74 MATVPGQLVWEIVKRNNCFLVKQFGRGNAKVQFSKEKNNLCNLNSYKHSGLANKKTVTIQ 253
MATVPGQL+WEIVK NNCFLVKQFGRGN+KVQFSKE NNL N++SYKHSGLANKKTVTIQ
Sbjct: 1 MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQ 60
Query: 254 PADREQGVVLATTKTKKQNKPKVSVNKSILKKEFPRMSNAVANQVVDNYYRPDLKKFALA 433
AD++Q VVLATTKTKKQNKPK+SVNKSILKKEFPRMS AVANQVVDNYYRPDLKK ALA
Sbjct: 61 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 120
Query: 434 RLSVISKSIRVAKSGAKQRNRQA* 505
RLS ISK +RVAKSGAKQRNRQA*
Sbjct: 121 RLSAISKGLRVAKSGAKQRNRQA* 144
>TAIR9_protein||AT2G19730.2 | Symbols: | 60S ribosomal protein L28 (RPL28A) |
chr2:8511752-8512995 FORWARD
Length = 144
Score = 253 bits (645), Expect = 1e-067
Identities = 126/144 (87%), Positives = 134/144 (93%)
Frame = +2
Query: 74 MATVPGQLVWEIVKRNNCFLVKQFGRGNAKVQFSKEKNNLCNLNSYKHSGLANKKTVTIQ 253
MATVPGQL+WEIVK NNCFLVKQFGRGN+KVQFSKE NNL N++SYKHSGLANKKTVTIQ
Sbjct: 1 MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQ 60
Query: 254 PADREQGVVLATTKTKKQNKPKVSVNKSILKKEFPRMSNAVANQVVDNYYRPDLKKFALA 433
AD++Q VVLATTKTKKQNKPK+SVNKSILKKEFPRMS AVANQVVDNYYRPDLKK ALA
Sbjct: 61 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 120
Query: 434 RLSVISKSIRVAKSGAKQRNRQA* 505
RLS ISK +RVAKSGAKQRNRQA*
Sbjct: 121 RLSAISKGLRVAKSGAKQRNRQA* 144
>TAIR9_protein||AT2G19730.3 | Symbols: | 60S ribosomal protein L28 (RPL28A) |
chr2:8511752-8512995 FORWARD
Length = 144
Score = 253 bits (645), Expect = 1e-067
Identities = 126/144 (87%), Positives = 134/144 (93%)
Frame = +2
Query: 74 MATVPGQLVWEIVKRNNCFLVKQFGRGNAKVQFSKEKNNLCNLNSYKHSGLANKKTVTIQ 253
MATVPGQL+WEIVK NNCFLVKQFGRGN+KVQFSKE NNL N++SYKHSGLANKKTVTIQ
Sbjct: 1 MATVPGQLIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQ 60
Query: 254 PADREQGVVLATTKTKKQNKPKVSVNKSILKKEFPRMSNAVANQVVDNYYRPDLKKFALA 433
AD++Q VVLATTKTKKQNKPK+SVNKSILKKEFPRMS AVANQVVDNYYRPDLKK ALA
Sbjct: 61 AADKDQAVVLATTKTKKQNKPKLSVNKSILKKEFPRMSKAVANQVVDNYYRPDLKKAALA 120
Query: 434 RLSVISKSIRVAKSGAKQRNRQA* 505
RLS ISK +RVAKSGAKQRNRQA*
Sbjct: 121 RLSAISKGLRVAKSGAKQRNRQA* 144
>TAIR9_protein||AT4G29410.1 | Symbols: | 60S ribosomal protein L28 (RPL28C) |
chr4:14468439-14469964 REVERSE
Length = 144
Score = 248 bits (631), Expect = 4e-066
Identities = 123/144 (85%), Positives = 131/144 (90%)
Frame = +2
Query: 74 MATVPGQLVWEIVKRNNCFLVKQFGRGNAKVQFSKEKNNLCNLNSYKHSGLANKKTVTIQ 253
MATVPGQL+WEIVKRNNCFLVKQFGRGNAKVQFSKE NNL N+NSYKHSGLANKKTVTIQ
Sbjct: 1 MATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKKTVTIQ 60
Query: 254 PADREQGVVLATTKTKKQNKPKVSVNKSILKKEFPRMSNAVANQVVDNYYRPDLKKFALA 433
A ++QGVVL TTKTK+QNKPK+SVNKSILKKEF RMS VANQVVDNYYRPDLKK ALA
Sbjct: 61 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALA 120
Query: 434 RLSVISKSIRVAKSGAKQRNRQA* 505
RLS ISK +RVAKSG K+RNRQA*
Sbjct: 121 RLSAISKGLRVAKSGPKRRNRQA* 144
>TAIR9_protein||AT4G29410.2 | Symbols: | 60S ribosomal protein L28 (RPL28C) |
chr4:14468439-14469964 REVERSE
Length = 144
Score = 248 bits (631), Expect = 4e-066
Identities = 123/144 (85%), Positives = 131/144 (90%)
Frame = +2
Query: 74 MATVPGQLVWEIVKRNNCFLVKQFGRGNAKVQFSKEKNNLCNLNSYKHSGLANKKTVTIQ 253
MATVPGQL+WEIVKRNNCFLVKQFGRGNAKVQFSKE NNL N+NSYKHSGLANKKTVTIQ
Sbjct: 1 MATVPGQLIWEIVKRNNCFLVKQFGRGNAKVQFSKESNNLVNINSYKHSGLANKKTVTIQ 60
Query: 254 PADREQGVVLATTKTKKQNKPKVSVNKSILKKEFPRMSNAVANQVVDNYYRPDLKKFALA 433
A ++QGVVL TTKTK+QNKPK+SVNKSILKKEF RMS VANQVVDNYYRPDLKK ALA
Sbjct: 61 AAGKDQGVVLGTTKTKRQNKPKLSVNKSILKKEFSRMSKVVANQVVDNYYRPDLKKAALA 120
Query: 434 RLSVISKSIRVAKSGAKQRNRQA* 505
RLS ISK +RVAKSG K+RNRQA*
Sbjct: 121 RLSAISKGLRVAKSGPKRRNRQA* 144
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,617,536,841
Number of Sequences: 33410
Number of Extensions: 20617536841
Number of Successful Extensions: 658745777
Number of sequences better than 0.0: 0
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