BLASTX 7.6.2
Query= UN41755 /QuerySize=673
(672 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G24710.1 | Symbols: | FUNCTIONS IN: molecular... 101 5e-022
>TAIR9_protein||AT5G24710.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like
(InterPro:IPR011046), WD40 repeat, region (InterPro:IPR017986), WD40
repeat (InterPro:IPR001680), WD40/YVTN repeat-like
(InterPro:IPR015943); Has 46946 Blast hits to 23834 proteins in 1336
species: Archae - 160; Bacteria - 9572; Metazoa - 15324; Fungi - 6794;
Plants - 1938; Viruses - 1106; Other Eukaryotes - 12052 (source: NCBI
BLink). | chr5:8459148-8467920 REVERSE
Length = 1378
Score = 101 bits (250), Expect = 5e-022
Identities = 67/112 (59%), Positives = 71/112 (63%), Gaps = 16/112 (14%)
Frame = +3
Query: 3 TAAISESEA*ETAADSESAAPETVAVAE------TTAHVDGPVTETVSEPPVV--EETPS 158
TAA +ES A ETAA +ES AP T AVAE A VDGPVTETVSEPP V EET
Sbjct: 1236 TAAAAESPAPETAAVAESPAPGTAAVAEAPASETAAAPVDGPVTETVSEPPPVEKEETSL 1295
Query: 159 EEKSDPSSTPNTETAIAATEGNSQTMPQP-----PPPEPVTTTVKPTENAAT 299
EEKSDPSSTPNTETA +TE SQT P PPEP+TT P E T
Sbjct: 1296 EEKSDPSSTPNTETA-TSTENTSQTTTTPESVTTAPPEPITTA--PPETVTT 1344
Score = 78 bits (190), Expect = 5e-015
Identities = 53/125 (42%), Positives = 65/125 (52%), Gaps = 9/125 (7%)
Frame = +3
Query: 3 TAAISESEA*ETAADSESAAPETVAVAETTAHVDGPVTETVSEPPVVEETPSEEKSDPSS 182
TAA++E+ A ETA AAP V ET + E S + + + +S
Sbjct: 1258 TAAVAEAPASETA-----AAPVDGPVTETVSEPPPVEKEETSLEEKSDPSSTPNTETATS 1312
Query: 183 TPNTETAIAATEGNSQTMPQP---PPPEPVTTT-VKPTENAATGRQQVTYPPIRSQPIDF 350
T NT E + P+P PPE VTTT VKPTENAAT R+ YPPIRSQPIDF
Sbjct: 1313 TENTSQTTTTPESVTTAPPEPITTAPPETVTTTAVKPTENAATERRVTNYPPIRSQPIDF 1372
Query: 351 GF*DG 365
F +G
Sbjct: 1373 DFLNG 1377
Score = 50 bits (118), Expect = 1e-006
Identities = 36/103 (34%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Frame = +3
Query: 33 ETAADSESAAPETVAVAE-----TTAHVDGPVTETVSEPPVVEETPSEEKSDPSSTPNTE 197
ETAA +ES APET AVAE T A + P +ET + P V+ +E S+P E
Sbjct: 1235 ETAAAAESPAPETAAVAESPAPGTAAVAEAPASETAAAP--VDGPVTETVSEPPPVEKEE 1292
Query: 198 TAIAATEGNSQTMPQPPPPEPVTTTVKPTENAATGRQQVTYPP 326
T++ S T P E T+T ++ T T PP
Sbjct: 1293 TSLEEKSDPSST----PNTETATSTENTSQTTTTPESVTTAPP 1331
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,662,425,717
Number of Sequences: 33410
Number of Extensions: 20662425717
Number of Successful Extensions: 658803642
Number of sequences better than 0.0: 0
|