BLASTX 7.6.2
Query= UN41764 /QuerySize=576
(575 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15224217|ref|NP_179464.1| putative small nuclear ribonucleopr... 168 4e-040
gi|18417572|ref|NP_567844.1| small nuclear ribonucleoprotein E [... 164 8e-039
gi|242051601|ref|XP_002454946.1| hypothetical protein SORBIDRAFT... 163 1e-038
gi|115443949|ref|NP_001045754.1| Os02g0126700 [Oryza sativa Japo... 163 2e-038
gi|225455956|ref|XP_002278114.1| PREDICTED: similar to small nuc... 161 5e-038
gi|255628153|gb|ACU14421.1| unknown [Glycine max] 161 8e-038
gi|195606896|gb|ACG25278.1| small nuclear ribonucleoprotein E [Z... 160 1e-037
gi|7269933|emb|CAB81026.1| small nuclear ribonucleoprotein homol... 160 1e-037
gi|195638708|gb|ACG38822.1| small nuclear ribonucleoprotein E [Z... 160 1e-037
gi|282848216|gb|ADB02889.1| small nuclear ribonucleoprotein poly... 160 1e-037
gi|255627911|gb|ACU14300.1| unknown [Glycine max] 159 2e-037
gi|224117550|ref|XP_002331664.1| predicted protein [Populus tric... 159 3e-037
gi|226529493|ref|NP_001148430.1| small nuclear ribonucleoprotein... 159 3e-037
gi|168027770|ref|XP_001766402.1| predicted protein [Physcomitrel... 158 4e-037
gi|168008828|ref|XP_001757108.1| predicted protein [Physcomitrel... 158 4e-037
gi|255563612|ref|XP_002522808.1| Small nuclear ribonucleoprotein... 158 5e-037
gi|255629853|gb|ACU15277.1| unknown [Glycine max] 158 7e-037
gi|195615352|gb|ACG29506.1| small nuclear ribonucleoprotein E [Z... 157 9e-037
gi|217071220|gb|ACJ83970.1| unknown [Medicago truncatula] 156 2e-036
gi|116779305|gb|ABK21228.1| unknown [Picea sitchensis] 155 4e-036
>gi|15224217|ref|NP_179464.1| putative small nuclear ribonucleoprotein
[Arabidopsis thaliana]
Length = 88
Score = 168 bits (425), Expect = 4e-040
Identities = 85/88 (96%), Positives = 86/88 (97%)
Frame = -3
Query: 510 MAGTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 331
MA TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 60
Query: 330 SIKKNTRKQLGRILLKGDNITLVMNTGK 247
SIKKNTRK LGRILLKGDNITL+MNTGK
Sbjct: 61 SIKKNTRKPLGRILLKGDNITLMMNTGK 88
>gi|18417572|ref|NP_567844.1| small nuclear ribonucleoprotein E [Arabidopsis
thaliana]
Length = 88
Score = 164 bits (414), Expect = 8e-039
Identities = 83/88 (94%), Positives = 84/88 (95%)
Frame = -3
Query: 510 MAGTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 331
MA TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 60
Query: 330 SIKKNTRKQLGRILLKGDNITLVMNTGK 247
SIKK TRK LGRILLKGDNITL+MN GK
Sbjct: 61 SIKKKTRKPLGRILLKGDNITLMMNAGK 88
>gi|242051601|ref|XP_002454946.1| hypothetical protein SORBIDRAFT_03g001950
[Sorghum bicolor]
Length = 88
Score = 163 bits (412), Expect = 1e-038
Identities = 80/88 (90%), Positives = 85/88 (96%)
Frame = -3
Query: 510 MAGTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 331
MA TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVLD+AEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEI 60
Query: 330 SIKKNTRKQLGRILLKGDNITLVMNTGK 247
++KKNTRK LGRILLKGDNITL+MNTGK
Sbjct: 61 NVKKNTRKSLGRILLKGDNITLMMNTGK 88
>gi|115443949|ref|NP_001045754.1| Os02g0126700 [Oryza sativa Japonica Group]
Length = 88
Score = 163 bits (411), Expect = 2e-038
Identities = 81/88 (92%), Positives = 85/88 (96%)
Frame = -3
Query: 510 MAGTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 331
MA TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVLDEAEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDEAEEI 60
Query: 330 SIKKNTRKQLGRILLKGDNITLVMNTGK 247
+IKK+TRK LGRILLKGDNITL+MNTGK
Sbjct: 61 NIKKDTRKSLGRILLKGDNITLMMNTGK 88
>gi|225455956|ref|XP_002278114.1| PREDICTED: similar to small nuclear
ribonucleoprotein E [Vitis vinifera]
Length = 88
Score = 161 bits (407), Expect = 5e-038
Identities = 80/88 (90%), Positives = 85/88 (96%)
Frame = -3
Query: 510 MAGTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 331
MA TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVLD+AEEV
Sbjct: 1 MATTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 330 SIKKNTRKQLGRILLKGDNITLVMNTGK 247
++KKNT+K LGRILLKGDNITL+MNTGK
Sbjct: 61 NVKKNTKKTLGRILLKGDNITLMMNTGK 88
>gi|255628153|gb|ACU14421.1| unknown [Glycine max]
Length = 88
Score = 161 bits (405), Expect = 8e-038
Identities = 80/88 (90%), Positives = 84/88 (95%)
Frame = -3
Query: 510 MAGTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 331
MA TKVQR+MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVLD+AEEV
Sbjct: 1 MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 330 SIKKNTRKQLGRILLKGDNITLVMNTGK 247
SIKK +RK LGRILLKGDNITL+MNTGK
Sbjct: 61 SIKKKSRKTLGRILLKGDNITLMMNTGK 88
>gi|195606896|gb|ACG25278.1| small nuclear ribonucleoprotein E [Zea mays]
Length = 88
Score = 160 bits (404), Expect = 1e-037
Identities = 78/88 (88%), Positives = 85/88 (96%)
Frame = -3
Query: 510 MAGTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 331
MA TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVL++AEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEI 60
Query: 330 SIKKNTRKQLGRILLKGDNITLVMNTGK 247
++KKNTRK LGRILLKGDNITL+MN+GK
Sbjct: 61 NVKKNTRKSLGRILLKGDNITLMMNSGK 88
>gi|7269933|emb|CAB81026.1| small nuclear ribonucleoprotein homolog [Arabidopsis
thaliana]
Length = 86
Score = 160 bits (403), Expect = 1e-037
Identities = 81/85 (95%), Positives = 82/85 (96%)
Frame = -3
Query: 510 MAGTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 331
MA TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 60
Query: 330 SIKKNTRKQLGRILLKGDNITLVMN 256
SIKK TRK LGRILLKGDNITL+MN
Sbjct: 61 SIKKKTRKPLGRILLKGDNITLMMN 85
>gi|195638708|gb|ACG38822.1| small nuclear ribonucleoprotein E [Zea mays]
Length = 88
Score = 160 bits (403), Expect = 1e-037
Identities = 78/88 (88%), Positives = 85/88 (96%)
Frame = -3
Query: 510 MAGTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 331
MA TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVL++AEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEI 60
Query: 330 SIKKNTRKQLGRILLKGDNITLVMNTGK 247
++KKNTRK LGRILLKGDNITL+MN+GK
Sbjct: 61 NVKKNTRKTLGRILLKGDNITLMMNSGK 88
>gi|282848216|gb|ADB02889.1| small nuclear ribonucleoprotein polypeptide
[Jatropha curcas]
Length = 88
Score = 160 bits (403), Expect = 1e-037
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = -3
Query: 510 MAGTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 331
MA TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVLD+AEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 330 SIKKNTRKQLGRILLKGDNITLVMNTGK 247
++KK TRK LGRILLKGDNITL+MN+GK
Sbjct: 61 NVKKKTRKSLGRILLKGDNITLMMNSGK 88
>gi|255627911|gb|ACU14300.1| unknown [Glycine max]
Length = 88
Score = 159 bits (402), Expect = 2e-037
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = -3
Query: 510 MAGTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 331
MA TKVQR+MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVLD+AEEV
Sbjct: 1 MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 330 SIKKNTRKQLGRILLKGDNITLVMNTGK 247
+IKK +RK LGRILLKGDNITL+MNTGK
Sbjct: 61 NIKKKSRKTLGRILLKGDNITLMMNTGK 88
>gi|224117550|ref|XP_002331664.1| predicted protein [Populus trichocarpa]
Length = 88
Score = 159 bits (400), Expect = 3e-037
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = -3
Query: 510 MAGTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 331
MA TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVL++AEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEV 60
Query: 330 SIKKNTRKQLGRILLKGDNITLVMNTGK 247
+IKK +RK LGRILLKGDNITL+MNTGK
Sbjct: 61 NIKKKSRKSLGRILLKGDNITLMMNTGK 88
>gi|226529493|ref|NP_001148430.1| small nuclear ribonucleoprotein E [Zea mays]
Length = 88
Score = 159 bits (400), Expect = 3e-037
Identities = 77/88 (87%), Positives = 85/88 (96%)
Frame = -3
Query: 510 MAGTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 331
MA TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEY+NLVL++AEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYINLVLEDAEEI 60
Query: 330 SIKKNTRKQLGRILLKGDNITLVMNTGK 247
++KKNTRK LGRILLKGDNITL+MN+GK
Sbjct: 61 NVKKNTRKSLGRILLKGDNITLMMNSGK 88
>gi|168027770|ref|XP_001766402.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 87
Score = 158 bits (399), Expect = 4e-037
Identities = 79/85 (92%), Positives = 82/85 (96%)
Frame = -3
Query: 501 TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEVSIK 322
TKVQRIMTQPINLIFRFLQSK+RIQIWLFEQKDLRIEGRI GFDEYMNLVLDEAEEVS+K
Sbjct: 3 TKVQRIMTQPINLIFRFLQSKSRIQIWLFEQKDLRIEGRIIGFDEYMNLVLDEAEEVSLK 62
Query: 321 KNTRKQLGRILLKGDNITLVMNTGK 247
K TRK LGRILLKGDNITL+MNTGK
Sbjct: 63 KKTRKPLGRILLKGDNITLMMNTGK 87
>gi|168008828|ref|XP_001757108.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 87
Score = 158 bits (399), Expect = 4e-037
Identities = 78/85 (91%), Positives = 83/85 (97%)
Frame = -3
Query: 501 TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEVSIK 322
TKVQRIMTQPINLIFRFLQSK+RIQIWLFEQKD+RIEGRI GFDEYMNLVL+EAEEVS+K
Sbjct: 3 TKVQRIMTQPINLIFRFLQSKSRIQIWLFEQKDMRIEGRIIGFDEYMNLVLEEAEEVSLK 62
Query: 321 KNTRKQLGRILLKGDNITLVMNTGK 247
KNTRK LGRILLKGDNITL+MNTGK
Sbjct: 63 KNTRKPLGRILLKGDNITLMMNTGK 87
>gi|255563612|ref|XP_002522808.1| Small nuclear ribonucleoprotein E, putative
[Ricinus communis]
Length = 88
Score = 158 bits (398), Expect = 5e-037
Identities = 78/88 (88%), Positives = 83/88 (94%)
Frame = -3
Query: 510 MAGTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 331
MA TKVQRIMTQPINLIFRFLQSKARIQ WLFEQKDLRIEGRI GFDEYMNLVLD+AEEV
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQFWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 330 SIKKNTRKQLGRILLKGDNITLVMNTGK 247
++KK +RK LGRILLKGDNITL+MNTGK
Sbjct: 61 NVKKKSRKTLGRILLKGDNITLMMNTGK 88
>gi|255629853|gb|ACU15277.1| unknown [Glycine max]
Length = 88
Score = 158 bits (397), Expect = 7e-037
Identities = 77/88 (87%), Positives = 83/88 (94%)
Frame = -3
Query: 510 MAGTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 331
MA TKVQR+MTQPINLIFRFLQ KARIQIWLFEQKDLRIEGRI GFDEYMNLVLD+AEEV
Sbjct: 1 MASTKVQRVMTQPINLIFRFLQGKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEV 60
Query: 330 SIKKNTRKQLGRILLKGDNITLVMNTGK 247
++KK +RK LGRILLKGDNITL+MNTGK
Sbjct: 61 NVKKKSRKTLGRILLKGDNITLMMNTGK 88
>gi|195615352|gb|ACG29506.1| small nuclear ribonucleoprotein E [Zea mays]
Length = 88
Score = 157 bits (396), Expect = 9e-037
Identities = 77/88 (87%), Positives = 84/88 (95%)
Frame = -3
Query: 510 MAGTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 331
MA TKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVL++AEE+
Sbjct: 1 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEI 60
Query: 330 SIKKNTRKQLGRILLKGDNITLVMNTGK 247
++KKNT K LGRILLKGDNITL+MN+GK
Sbjct: 61 NVKKNTPKTLGRILLKGDNITLMMNSGK 88
>gi|217071220|gb|ACJ83970.1| unknown [Medicago truncatula]
Length = 88
Score = 156 bits (394), Expect = 2e-036
Identities = 76/88 (86%), Positives = 83/88 (94%)
Frame = -3
Query: 510 MAGTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 331
MA TKVQR+MTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNL LD+AEEV
Sbjct: 1 MASTKVQRVMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLALDDAEEV 60
Query: 330 SIKKNTRKQLGRILLKGDNITLVMNTGK 247
++KK ++K LGRILLKGDNITL+MNTGK
Sbjct: 61 NVKKKSKKTLGRILLKGDNITLMMNTGK 88
>gi|116779305|gb|ABK21228.1| unknown [Picea sitchensis]
Length = 88
Score = 155 bits (391), Expect = 4e-036
Identities = 76/88 (86%), Positives = 83/88 (94%)
Frame = -3
Query: 510 MAGTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRITGFDEYMNLVLDEAEEV 331
MA T+VQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRI GFDEYMNLVL++AEE+
Sbjct: 1 MATTRVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLEDAEEI 60
Query: 330 SIKKNTRKQLGRILLKGDNITLVMNTGK 247
S+K+ T K LGRILLKGDNITL+MNTGK
Sbjct: 61 SVKRKTHKPLGRILLKGDNITLMMNTGK 88
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,602,345,096,649
Number of Sequences: 15229318
Number of Extensions: 4602345096649
Number of Successful Extensions: 1080505272
Number of sequences better than 0.0: 0
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