BLASTX 7.6.2
Query= UN41771 /QuerySize=1341
(1340 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9BV90|SNR25_HUMAN U11/U12 small nuclear ribonucleoprotein 25... 63 5e-009
sp|Q8VIK1|SNR25_MOUSE U11/U12 small nuclear ribonucleoprotein 25... 62 9e-009
sp|Q3ZBQ4|SNR25_BOVIN U11/U12 small nuclear ribonucleoprotein 25... 62 1e-008
>sp|Q9BV90|SNR25_HUMAN U11/U12 small nuclear ribonucleoprotein 25 kDa protein
OS=Homo sapiens GN=SNRNP25 PE=1 SV=1
Length = 132
Score = 63 bits (151), Expect = 5e-009
Identities = 29/78 (37%), Positives = 48/78 (61%)
Frame = +3
Query: 291 VAVMNSATLKDLKLLIKKKVNEMEQANMGQRHISWKHVWSNFCLSCNNEKLLDDDAVLQD 470
V V+ SAT+ DLK I++ V ++ G +HISW +VW + L+ EKL +D L+D
Sbjct: 55 VVVVQSATVLDLKKAIQRYVQLKQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRD 114
Query: 471 VGVRNNSQIAFVPYVTKK 524
G+RN +++F+ + +K
Sbjct: 115 YGIRNRDEVSFIKKLRQK 132
>sp|Q8VIK1|SNR25_MOUSE U11/U12 small nuclear ribonucleoprotein 25 kDa protein
OS=Mus musculus GN=Snrnp25 PE=1 SV=1
Length = 123
Score = 62 bits (149), Expect = 9e-009
Identities = 28/78 (35%), Positives = 48/78 (61%)
Frame = +3
Query: 291 VAVMNSATLKDLKLLIKKKVNEMEQANMGQRHISWKHVWSNFCLSCNNEKLLDDDAVLQD 470
V V+ +AT+ DLK I++ V ++ G +HISW +VW + L+ EKL +D L+D
Sbjct: 46 VVVVQNATVLDLKKAIQRYVQLKQEREGGVQHISWSYVWRTYHLTSAGEKLTEDRKKLRD 105
Query: 471 VGVRNNSQIAFVPYVTKK 524
G+RN +++F+ + +K
Sbjct: 106 YGIRNRDEVSFIKKLRQK 123
>sp|Q3ZBQ4|SNR25_BOVIN U11/U12 small nuclear ribonucleoprotein 25 kDa protein
OS=Bos taurus GN=SNRNP25 PE=2 SV=2
Length = 123
Score = 62 bits (148), Expect = 1e-008
Identities = 28/78 (35%), Positives = 48/78 (61%)
Frame = +3
Query: 291 VAVMNSATLKDLKLLIKKKVNEMEQANMGQRHISWKHVWSNFCLSCNNEKLLDDDAVLQD 470
V V+ +AT+ DLK I++ V ++ G +HISW +VW + L+ EKL +D L+D
Sbjct: 46 VVVVQNATVLDLKKAIQRYVQLRQEREGGIQHISWSYVWRTYHLTSAGEKLTEDRKKLRD 105
Query: 471 VGVRNNSQIAFVPYVTKK 524
G+RN +++F+ + +K
Sbjct: 106 YGIRNRDEVSFIKKLRQK 123
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 159,773,869,933
Number of Sequences: 518415
Number of Extensions: 159773869933
Number of Successful Extensions: 978673985
Number of sequences better than 0.0: 0
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