BLASTX 7.6.2
Query= UN41839 /QuerySize=1122
(1121 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G16830.1 | Symbols: | nuclear RNA-binding pro... 193 3e-049
TAIR9_protein||AT5G47210.1 | Symbols: | nuclear RNA-binding pro... 188 7e-048
TAIR9_protein||AT5G47210.3 | Symbols: | nuclear RNA-binding pro... 188 7e-048
TAIR9_protein||AT5G47210.2 | Symbols: | nuclear RNA-binding pro... 173 2e-043
TAIR9_protein||AT4G17520.1 | Symbols: | nuclear RNA-binding pro... 167 2e-041
TAIR9_protein||AT4G16830.3 | Symbols: | nuclear RNA-binding pro... 150 2e-036
TAIR9_protein||AT4G16830.2 | Symbols: | nuclear RNA-binding pro... 122 4e-028
TAIR9_protein||AT2G05580.1 | Symbols: | unknown protein | chr2:... 54 2e-007
TAIR9_protein||AT1G61080.1 | Symbols: | proline-rich family pro... 51 1e-006
TAIR9_protein||AT3G20470.1 | Symbols: GRP-5, ATGRP-5, GRP5, ATGR... 48 9e-006
>TAIR9_protein||AT4G16830.1 | Symbols: | nuclear RNA-binding protein (RGGA) |
chr4:9470621-9472308 FORWARD
Length = 356
Score = 193 bits (488), Expect = 3e-049
Identities = 127/259 (49%), Positives = 154/259 (59%), Gaps = 36/259 (13%)
Frame = -2
Query: 925 MSTLNPFDLLGGDAEDPSQIVVSLPK--KVEKAAPVQ--PVAKGAKVQTKQPPTSQAVRE 758
M+TLNPFDLL DAEDPSQ+ V++ K K +K+ V P K+ +K P +QAVRE
Sbjct: 1 MATLNPFDLLDDDAEDPSQLAVAIEKIDKSKKSGQVSSLPAKSAPKLPSKPLPPAQAVRE 60
Query: 757 SR-NAPLGGRGGGGGAGRGAPRGSFN--------------PGGDRLHDPKDGERTGG--- 632
+R +AP GG GG GG RG RG +N P G+ ER GG
Sbjct: 61 ARSDAPRGG-GGRGGFNRG--RGGYNRDDGNNGYSGGYTKPSGEGDVSKSSYERRGGGGA 117
Query: 631 ----FRGYRESGG-RGGQRGGFANGRAGDVEGRPKRAFERRSGTGRGNDLKREGGGRGNW 467
FRG E GG GG+RGGF+N GD E RP+RAFERRSGTGRG+D KR+G GRGNW
Sbjct: 118 PRGSFRG--EGGGPGGGRRGGFSN-EGGDGE-RPRRAFERRSGTGRGSDFKRDGSGRGNW 173
Query: 466 GTPEDDIPPPTEEATTEVEKSSVAEKEGGENNTTDAKNEAPADEEKEKEPEDKEMTLEEY 287
GTP ++I TE + V EK ++ DA E E EKEPEDKEMTL+EY
Sbjct: 174 GTPGEEIAAETEAVAGVETEKDVGEKPAVDDVAADANKEDTVVE--EKEPEDKEMTLDEY 231
Query: 286 EKIMEEKKKALQATKVEEK 230
EKI+EEKKKALQ+ E+
Sbjct: 232 EKILEEKKKALQSLTTSER 250
>TAIR9_protein||AT5G47210.1 | Symbols: | nuclear RNA-binding protein, putative
| chr5:19169222-19171012 REVERSE
Length = 358
Score = 188 bits (476), Expect = 7e-048
Identities = 111/222 (50%), Positives = 134/222 (60%), Gaps = 12/222 (5%)
Frame = -2
Query: 862 VSLPKKVEKAAPVQPVAKGAKVQTKQPPTSQAVRESRNAPLGGRGGGG----GAGRGAP- 698
V PK + P ++ + P + R GRG GG AP
Sbjct: 35 VQPPKAAKFPTKPAPPSQAVRESRNAPQGGRGGTGGRGGFSRGRGNGGYNRDNRNNDAPG 94
Query: 697 -RGSFNPGGDRLHDPKDG-ERTGGFRGYRESGGR-GGQRGGFANGRAGDVEGRPKRAFER 527
F+ G R + DG R G GYR GGR G +RGG ANG +GDVE RP R ++R
Sbjct: 95 NENGFSGGYRRPSEDADGASRGGSVGGYRVGGGREGPRRGGVANGESGDVE-RPPRNYDR 153
Query: 526 RSGTGRGNDLKREGGGRGNWGTPEDDIPPPTEEATTEVEKSSVAEKEGGENNTTDAKNEA 347
S TG G +KR GGGRGNWGT EDDIPP +EE TTEVEKS VAEK+GGE+ T +AK E
Sbjct: 154 HSRTGHGTGMKRNGGGRGNWGTTEDDIPPTSEEPTTEVEKSPVAEKQGGEDETPEAKKEL 213
Query: 346 PADEEKEKEPED---KEMTLEEYEKIMEEKKKALQATKVEEK 230
A+E+ +KE E+ +EMTLEEYEKI+EEKKKALQATKVEE+
Sbjct: 214 TAEEKAQKEAEEAEAREMTLEEYEKILEEKKKALQATKVEER 255
Score = 112 bits (278), Expect = 7e-025
Identities = 72/149 (48%), Positives = 82/149 (55%), Gaps = 19/149 (12%)
Frame = -2
Query: 925 MSTLNPFDLLGGDAEDPSQIVVSLPKKVEKAAPVQPVAKGAKVQTKQPPTSQAVRESRNA 746
M++LNPFDLLG DAEDPSQ+ V+L +KVEKAA K AK TK P SQAVRESRNA
Sbjct: 1 MASLNPFDLLGDDAEDPSQLAVALSQKVEKAAAAVQPPKAAKFPTKPAPPSQAVRESRNA 60
Query: 745 PLGGRGGGGGAG---RGAPRGSFNPGGDRLHDPKDGERTGGFRGYR------ESGGRGGQ 593
P GGRGG GG G RG G +N D ++ G G GYR + RGG
Sbjct: 61 PQGGRGGTGGRGGFSRGRGNGGYN--RDNRNNDAPGNENGFSGGYRRPSEDADGASRGGS 118
Query: 592 RGGFANGRAGDVEGRPKRAFERRSGTGRG 506
GG+ G G EG RR G G
Sbjct: 119 VGGYRVG--GGREG------PRRGGVANG 139
>TAIR9_protein||AT5G47210.3 | Symbols: | nuclear RNA-binding protein, putative
| chr5:19169388-19171012 REVERSE
Length = 302
Score = 188 bits (476), Expect = 7e-048
Identities = 111/222 (50%), Positives = 134/222 (60%), Gaps = 12/222 (5%)
Frame = -2
Query: 862 VSLPKKVEKAAPVQPVAKGAKVQTKQPPTSQAVRESRNAPLGGRGGGG----GAGRGAP- 698
V PK + P ++ + P + R GRG GG AP
Sbjct: 35 VQPPKAAKFPTKPAPPSQAVRESRNAPQGGRGGTGGRGGFSRGRGNGGYNRDNRNNDAPG 94
Query: 697 -RGSFNPGGDRLHDPKDG-ERTGGFRGYRESGGR-GGQRGGFANGRAGDVEGRPKRAFER 527
F+ G R + DG R G GYR GGR G +RGG ANG +GDVE RP R ++R
Sbjct: 95 NENGFSGGYRRPSEDADGASRGGSVGGYRVGGGREGPRRGGVANGESGDVE-RPPRNYDR 153
Query: 526 RSGTGRGNDLKREGGGRGNWGTPEDDIPPPTEEATTEVEKSSVAEKEGGENNTTDAKNEA 347
S TG G +KR GGGRGNWGT EDDIPP +EE TTEVEKS VAEK+GGE+ T +AK E
Sbjct: 154 HSRTGHGTGMKRNGGGRGNWGTTEDDIPPTSEEPTTEVEKSPVAEKQGGEDETPEAKKEL 213
Query: 346 PADEEKEKEPED---KEMTLEEYEKIMEEKKKALQATKVEEK 230
A+E+ +KE E+ +EMTLEEYEKI+EEKKKALQATKVEE+
Sbjct: 214 TAEEKAQKEAEEAEAREMTLEEYEKILEEKKKALQATKVEER 255
Score = 112 bits (278), Expect = 7e-025
Identities = 72/149 (48%), Positives = 82/149 (55%), Gaps = 19/149 (12%)
Frame = -2
Query: 925 MSTLNPFDLLGGDAEDPSQIVVSLPKKVEKAAPVQPVAKGAKVQTKQPPTSQAVRESRNA 746
M++LNPFDLLG DAEDPSQ+ V+L +KVEKAA K AK TK P SQAVRESRNA
Sbjct: 1 MASLNPFDLLGDDAEDPSQLAVALSQKVEKAAAAVQPPKAAKFPTKPAPPSQAVRESRNA 60
Query: 745 PLGGRGGGGGAG---RGAPRGSFNPGGDRLHDPKDGERTGGFRGYR------ESGGRGGQ 593
P GGRGG GG G RG G +N D ++ G G GYR + RGG
Sbjct: 61 PQGGRGGTGGRGGFSRGRGNGGYN--RDNRNNDAPGNENGFSGGYRRPSEDADGASRGGS 118
Query: 592 RGGFANGRAGDVEGRPKRAFERRSGTGRG 506
GG+ G G EG RR G G
Sbjct: 119 VGGYRVG--GGREG------PRRGGVANG 139
>TAIR9_protein||AT5G47210.2 | Symbols: | nuclear RNA-binding protein, putative
| chr5:19169155-19171012 REVERSE
Length = 306
Score = 173 bits (437), Expect = 2e-043
Identities = 103/213 (48%), Positives = 125/213 (58%), Gaps = 12/213 (5%)
Frame = -2
Query: 862 VSLPKKVEKAAPVQPVAKGAKVQTKQPPTSQAVRESRNAPLGGRGGGG----GAGRGAP- 698
V PK + P ++ + P + R GRG GG AP
Sbjct: 35 VQPPKAAKFPTKPAPPSQAVRESRNAPQGGRGGTGGRGGFSRGRGNGGYNRDNRNNDAPG 94
Query: 697 -RGSFNPGGDRLHDPKDG-ERTGGFRGYRESGGR-GGQRGGFANGRAGDVEGRPKRAFER 527
F+ G R + DG R G GYR GGR G +RGG ANG +GDVE RP R ++R
Sbjct: 95 NENGFSGGYRRPSEDADGASRGGSVGGYRVGGGREGPRRGGVANGESGDVE-RPPRNYDR 153
Query: 526 RSGTGRGNDLKREGGGRGNWGTPEDDIPPPTEEATTEVEKSSVAEKEGGENNTTDAKNEA 347
S TG G +KR GGGRGNWGT EDDIPP +EE TTEVEKS VAEK+GGE+ T +AK E
Sbjct: 154 HSRTGHGTGMKRNGGGRGNWGTTEDDIPPTSEEPTTEVEKSPVAEKQGGEDETPEAKKEL 213
Query: 346 PADEEKEKEPED---KEMTLEEYEKIMEEKKKA 257
A+E+ +KE E+ +EMTLEEYEKI+EEKKKA
Sbjct: 214 TAEEKAQKEAEEAEAREMTLEEYEKILEEKKKA 246
Score = 112 bits (278), Expect = 7e-025
Identities = 72/149 (48%), Positives = 82/149 (55%), Gaps = 19/149 (12%)
Frame = -2
Query: 925 MSTLNPFDLLGGDAEDPSQIVVSLPKKVEKAAPVQPVAKGAKVQTKQPPTSQAVRESRNA 746
M++LNPFDLLG DAEDPSQ+ V+L +KVEKAA K AK TK P SQAVRESRNA
Sbjct: 1 MASLNPFDLLGDDAEDPSQLAVALSQKVEKAAAAVQPPKAAKFPTKPAPPSQAVRESRNA 60
Query: 745 PLGGRGGGGGAG---RGAPRGSFNPGGDRLHDPKDGERTGGFRGYR------ESGGRGGQ 593
P GGRGG GG G RG G +N D ++ G G GYR + RGG
Sbjct: 61 PQGGRGGTGGRGGFSRGRGNGGYN--RDNRNNDAPGNENGFSGGYRRPSEDADGASRGGS 118
Query: 592 RGGFANGRAGDVEGRPKRAFERRSGTGRG 506
GG+ G G EG RR G G
Sbjct: 119 VGGYRVG--GGREG------PRRGGVANG 139
>TAIR9_protein||AT4G17520.1 | Symbols: | nuclear RNA-binding protein, putative
| chr4:9771496-9773313 FORWARD
Length = 361
Score = 167 bits (421), Expect = 2e-041
Identities = 92/176 (52%), Positives = 115/176 (65%), Gaps = 13/176 (7%)
Frame = -2
Query: 736 GRGGGGGAGRGAPRGSFNP-------GGDRLHDPKDGERTGGFRGYRESGGRGGQRGGFA 578
GRGG GG R + R + P GG R + DG R GG G G RG +RG ++
Sbjct: 71 GRGGRGGNNRDS-RNNDGPANENGYGGGYRRSEEGDGARRGGPVG----GYRGDRRGSYS 125
Query: 577 NGRAGDVEGRPKRAFERRSGTGRGNDLKREGGGRGNWGTPEDDIPPPTEEATTEVEKSSV 398
NG RP++ ++R S T GN+ KR+G GR NWGT +DDI P TEE+T V+K+
Sbjct: 126 NGGDSGDSERPRKNYDRHSRTAYGNEDKRDGAGRANWGTTQDDITPVTEESTAVVDKNLT 185
Query: 397 AEKEGGENNTTDAKNEAPADEEKEKEPEDKEMTLEEYEKIMEEKKKALQATKVEEK 230
EK+ GE TDAKNE PA++ +EK PEDKEMTLEEYEK++EEKKKALQATKVEE+
Sbjct: 186 VEKQDGEGEATDAKNETPAEKAEEK-PEDKEMTLEEYEKVLEEKKKALQATKVEER 240
Score = 111 bits (275), Expect = 1e-024
Identities = 94/237 (39%), Positives = 117/237 (49%), Gaps = 17/237 (7%)
Frame = -2
Query: 925 MSTLNPFDLLGGDAEDPSQIVVSLPKKVEKAAPVQPVAKGAKVQTKQPPTSQAVRESRNA 746
M+++NPFDLL DAEDPSQIV S P KV APVQ AK K+ TK PP SQAVRE+RNA
Sbjct: 1 MASVNPFDLLDDDAEDPSQIVASKPLKV--VAPVQ-TAKSGKMPTKPPPPSQAVREARNA 57
Query: 745 PLGGRGG--GGGAGRGAPRGSFNPGGDRLHDPKDGERTGGFRGYRES-GGRGGQRGGFAN 575
P GGRG GG GRG RG N P + GG GYR S G G +RGG
Sbjct: 58 PGGGRGAGRGGSYGRGG-RGGNNRDSRNNDGPANENGYGG--GYRRSEEGDGARRGGPVG 114
Query: 574 GRAGDVEGRPKRAFERRSGTGRGNDLKREGGGRGNWGTPED-DIPPPTEEATTEVEKSSV 398
G GD G + SG + R +G + D TT+ + + V
Sbjct: 115 GYRGDRRGSYSNGGD--SGDSERPRKNYDRHSRTAYGNEDKRDGAGRANWGTTQDDITPV 172
Query: 397 AEKEGG--ENNTTDAK--NEAPADEEKEKEPEDK-EMTLEEYEKIMEEKKKALQATK 242
E+ + N T K E A + K + P +K E E+ E +EE +K L+ K
Sbjct: 173 TEESTAVVDKNLTVEKQDGEGEATDAKNETPAEKAEEKPEDKEMTLEEYEKVLEEKK 229
>TAIR9_protein||AT4G16830.3 | Symbols: | nuclear RNA-binding protein (RGGA) |
chr4:9470652-9472308 FORWARD
Length = 346
Score = 150 bits (377), Expect = 2e-036
Identities = 100/202 (49%), Positives = 118/202 (58%), Gaps = 32/202 (15%)
Frame = -2
Query: 766 VRESR-NAPLGGRGGGGGAGRGAPRGSFN--------------PGGDRLHDPKDGERTGG 632
VRE+R +AP GG GG GG RG RG +N P G+ ER GG
Sbjct: 48 VREARSDAPRGG-GGRGGFNRG--RGGYNRDDGNNGYSGGYTKPSGEGDVSKSSYERRGG 104
Query: 631 -------FRGYRESGG-RGGQRGGFANGRAGDVEGRPKRAFERRSGTGRGNDLKREGGGR 476
FRG E GG GG+RGGF+N GD E RP+RAFERRSGTGRG+D KR+G GR
Sbjct: 105 GGAPRGSFRG--EGGGPGGGRRGGFSN-EGGDGE-RPRRAFERRSGTGRGSDFKRDGSGR 160
Query: 475 GNWGTPEDDIPPPTEEATTEVEKSSVAEKEGGENNTTDAKNEAPADEEKEKEPEDKEMTL 296
GNWGTP ++I TE + V EK ++ DA E E EKEPEDKEMTL
Sbjct: 161 GNWGTPGEEIAAETEAVAGVETEKDVGEKPAVDDVAADANKEDTVVE--EKEPEDKEMTL 218
Query: 295 EEYEKIMEEKKKALQATKVEEK 230
+EYEKI+EEKKKALQ+ E+
Sbjct: 219 DEYEKILEEKKKALQSLTTSER 240
>TAIR9_protein||AT4G16830.2 | Symbols: | nuclear RNA-binding protein (RGGA) |
chr4:9470979-9472308 FORWARD
Length = 266
Score = 122 bits (306), Expect = 4e-028
Identities = 64/115 (55%), Positives = 76/115 (66%), Gaps = 2/115 (1%)
Frame = -2
Query: 574 GRAGDVEGRPKRAFERRSGTGRGNDLKREGGGRGNWGTPEDDIPPPTEEATTEVEKSSVA 395
G AG RP+RAFERRSGTGRG+D KR+G GRGNWGTP ++I TE + V
Sbjct: 48 GVAGGDGERPRRAFERRSGTGRGSDFKRDGSGRGNWGTPGEEIAAETEAVAGVETEKDVG 107
Query: 394 EKEGGENNTTDAKNEAPADEEKEKEPEDKEMTLEEYEKIMEEKKKALQATKVEEK 230
EK ++ DA E E EKEPEDKEMTL+EYEKI+EEKKKALQ+ E+
Sbjct: 108 EKPAVDDVAADANKEDTVVE--EKEPEDKEMTLDEYEKILEEKKKALQSLTTSER 160
>TAIR9_protein||AT2G05580.1 | Symbols: | unknown protein | chr2:2055578-2056563
FORWARD
Length = 303
Score = 54 bits (128), Expect = 2e-007
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Frame = -2
Query: 739 GGRGGGGGAGRGAPRGSFNPGGDRLHDPKDGERTGGFRGYRESG---GRGGQRGGFANGR 569
GG+ GGGG G+G +G GG + + G++ GG +G ++ G G+GG +GG G+
Sbjct: 149 GGQKGGGGGGQGGQKGGGGQGGQKGGGGQGGQKGGGGQGGQKGGGGRGQGGMKGGGGGGQ 208
Query: 568 AGDVEGRPKRAFERRSGTGRGNDLKREGGGRGNWG 464
G G G G G + GGG G G
Sbjct: 209 GGHKGG----------GGGGGQGGHKGGGGGGGQG 233
>TAIR9_protein||AT1G61080.1 | Symbols: | proline-rich family protein |
chr1:22493194-22497019 REVERSE
Length = 908
Score = 51 bits (120), Expect = 1e-006
Identities = 34/89 (38%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Frame = +3
Query: 474 PRPPPSRFRSLPRPVPLRRSKALFGRPSTSPALPLANPPR*PPRPPLSRYPRNPPVLSPS 653
P PPP R P P P A P P A PP PP P +R P PP+ P
Sbjct: 525 PPPPPPRAAVAPPPPPPPPGTAAAPPPPPPPPGTQAAPPPPPPPPMQNRAPSPPPM--PM 582
Query: 654 FGS*SLSPPGLNEPRGAPRPAPPPPPRPP 740
S S PP P A PPPP PP
Sbjct: 583 GNSGSGGPPPPPPPMPLANGATPPPPPPP 611
>TAIR9_protein||AT3G20470.1 | Symbols: GRP-5, ATGRP-5, GRP5, ATGRP5 | GRP5
(GLYCINE-RICH PROTEIN 5); structural constituent of cell wall |
chr3:7140625-7141149 REVERSE
Length = 175
Score = 48 bits (113), Expect = 9e-006
Identities = 34/91 (37%), Positives = 36/91 (39%)
Frame = -2
Query: 736 GRGGGGGAGRGAPRGSFNPGGDRLHDPKDGERTGGFRGYRESGGRGGQRGGFANGRAGDV 557
G GGGGG G G G GG L G GGF G SGG G GG G G
Sbjct: 58 GLGGGGGFGGGGGLGGGAGGGGGLGGGAGGGAGGGFGGGAGSGGGLGGGGGAGGGFGGGA 117
Query: 556 EGRPKRAFERRSGTGRGNDLKREGGGRGNWG 464
G F +G G G GG G +G
Sbjct: 118 GGGSGGGFGGGAGAGGGLGGGGGAGGGGGFG 148
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,662,425,717
Number of Sequences: 33410
Number of Extensions: 20662425717
Number of Successful Extensions: 658803642
Number of sequences better than 0.0: 0
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